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FFCP PHASE1:Mm9::chr15:22966204..22966247,+: Difference between revisions

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{{FFCP|EntrezGene=320865|HGNC=|MCL_coexpression_id=39|UniProt=E9Q9Q6|association_with_transcript=0bp_to_ENSMUST00000040427,ENSMUST00000164787,ENSMUST00000170626,NM_001081299,uc007vir.1,uc007vis.1_5end|description=CAGE_peak_1_at_Cdh18_5end|id=chr15:22966204..22966247,+|ontology_enrichment_celltype=CL:0000117!2.70e-07!23;CL:0000337!2.70e-07!23|ontology_enrichment_celltype_v019_2=CL:0000117,1.41e-07,23;CL:0000337,1.41e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!5.16e-22!71;UBERON:0003075!5.16e-22!71;UBERON:0007284!5.16e-22!71;UBERON:0000033!3.49e-21!63;UBERON:0001049!7.31e-19!52;UBERON:0005068!7.31e-19!52;UBERON:0006241!7.31e-19!52;UBERON:0007135!7.31e-19!52;UBERON:0000955!1.07e-17!50;UBERON:0006238!1.07e-17!50;UBERON:0004121!2.31e-17!102;UBERON:0000924!2.31e-17!102;UBERON:0006601!2.31e-17!102;UBERON:0003056!3.46e-17!49;UBERON:0002616!5.14e-17!49;UBERON:0000073!1.13e-15!75;UBERON:0001016!1.13e-15!75;UBERON:0001017!1.26e-15!73;UBERON:0005743!1.26e-15!73;UBERON:0003080!2.81e-13!40;UBERON:0002780!1.27e-12!39;UBERON:0001890!1.27e-12!39;UBERON:0006240!1.27e-12!39;UBERON:0002020!2.78e-12!34;UBERON:0000153!1.81e-11!94;UBERON:0007811!6.77e-11!86;UBERON:0002791!1.41e-09!29;UBERON:0003528!1.41e-09!29;UBERON:0001893!1.41e-09!29;UBERON:0002021!1.15e-07!10;UBERON:0000411!1.15e-07!10;UBERON:0001950!1.15e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0002346,9.39e-25,64;UBERON:0003075,9.39e-25,64;UBERON:0007284,9.39e-25,64;UBERON:0000073,8.02e-23,54;UBERON:0010371,8.73e-22,73;UBERON:0001049,2.49e-21,52;UBERON:0005068,2.49e-21,52;UBERON:0006241,2.49e-21,52;UBERON:0007135,2.49e-21,52;UBERON:0003056,1.46e-19,49;UBERON:0004121,6.89e-19,95;UBERON:0000924,6.89e-19,95;UBERON:0006601,6.89e-19,95;UBERON:0001017,1.24e-18,73;UBERON:0001016,1.20e-17,75;UBERON:0000955,1.76e-17,47;UBERON:0006238,1.76e-17,47;UBERON:0002616,1.25e-16,46;UBERON:0010314,1.50e-15,92;UBERON:0003080,2.10e-14,40;UBERON:0002780,1.44e-13,39;UBERON:0001890,1.44e-13,39;UBERON:0006240,1.44e-13,39;UBERON:0002020,1.45e-13,34;UBERON:0003528,4.60e-10,29;UBERON:0002791,4.60e-10,29;UBERON:0001893,4.60e-10,29;UBERON:0002021,5.94e-10,10;UBERON:0000411,5.94e-10,10;UBERON:0001950,5.94e-10,10;UBERON:0003076,7.72e-08,12;UBERON:0003057,7.72e-08,12|phase1_expression=4.32401887182944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.90902598404949,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.755380907853464,0.608261587317087,2.0190142737785,0.782391344348039,0,0.219686182734472,0.194429899074283,0.419959264876088,0,0,0,0,0,0,0,3.43937983461316,4.7609188134483,1.26766280701236,0.338844532069132,1.77858959222228,0,0,0,0,0,0.518448061542388,0.405017814995072,0.210324961351382,7.42692559449889,8.39300455616131,0.734944795289724,0.191690942036473,0,11.0115880999389,15.3224805702225,15.6678663921368,2.90149833006426,4.11694396210843,3.64639359389732,13.1216009530649,21.9477417912355,16.9606055032259,15.9099436155781,21.3557521198654,8.94717339961443,0.37863096666592,0.831287161174641,0,1.72084775396277,0,0.539703191637817,0,0,1.26399978118577,0.681721290312231,0.259786004602869,0.70667914902068,14.6477156567748,1.28326477414318,0,0,0,0,0,0.79928715803342,0.258937883647172,4.89859058913922,0.173485326766136,0.608930956624282,0.691846491768175,1.05505848386836,0.587943535678524,2.13633205260448,0,2.74738778147832,0,0.485300549842228,0.220841518460394,0.484875253135222,0,123.553496338873,107.865054008929,0,0,0,0,28.9095934051308,11.4375150704657,5.40313714085317,27.4642425903797,28.640131220997,18.7009240103604,20.9291229357407,0.611036183101898,0,0,1.89397670297827,1.43132487258974,4.82794419310293,5.76198815377118,6.17889753126432,5.71506592871154,5.25266253167884,6.37171727006156,8.53721123438752,0,1.32374256117473,1.40760899331159,1.7535658594206,2.22437799380478,0.696504333044333,1.4404749548556,0.398068533636986,0,0,0,0.414251545071004,0,0.720248245844059,0.473489471170421,0.196764231747404,0.617068451549513,0.697601834251224,0.804820204198858,0.233530684734339,0.329119699826961,0.820837320395476,0,0,0,0,9.46304768538573,2.57261530948211,0,0,3.41261200856374,1.62565670302307,0.515469845288373,0.605050573870028,0.889512175379481,1.52180500890047,0,0.164698954724011,0.502670417600539,0.795825888164603,0.58489226135736,0,0,0.199141273254367,0.189667900953082,0.571242563048644,0,0.203651327845314,0.193952487167626,0.420814919341911,0.0632365371242573,0,0,0.123397163921801,0.296452627087149,0,0.196558995113203,0.449724224769707,0,0.482354319504834,0.50925170356284,0,0.162135226775035,0,0,0.372140947668503,0.936113019343682,0.252578877947112,0.538192240565737,0,0,1.51593129416388,0.651859905768103,0.339490171550376,0.469380496577004,0.502518772325447,0,0,0.315270288212382,0.221464689648775,0.318909537314974,0,0,0,0,0,0,0,30.0229603277171,30.3578268273806,0,0,0,0,0.861693590931196,0.238968797952552,0,0,0.404810701674894,0,0,26.3483479465882,0,0.35613120733451,0.488660878060728,0.164970122972535,0,0,0,0.1886050797558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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=320865
|HGNC=
|MCL_coexpression_id=39
|TSSclassifier=NA
|UniProt=E9Q9Q6
|association_with_transcript=0bp_to_ENSMUST00000040427,ENSMUST00000164787,ENSMUST00000170626,NM_001081299,uc007vir.1,uc007vis.1_5end
|cluster_id=chr15:22966204..22966247,+
|description=CAGE_peak_1_at_Cdh18_5end
|id=chr15:22966204..22966247,+
|ontology_enrichment_celltype=CL:0000117!2.70e-07!23;CL:0000337!2.70e-07!23
|ontology_enrichment_celltype_v019_2=CL:0000117,1.41e-07,23;CL:0000337,1.41e-07,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!5.16e-22!71;UBERON:0003075!5.16e-22!71;UBERON:0007284!5.16e-22!71;UBERON:0000033!3.49e-21!63;UBERON:0001049!7.31e-19!52;UBERON:0005068!7.31e-19!52;UBERON:0006241!7.31e-19!52;UBERON:0007135!7.31e-19!52;UBERON:0000955!1.07e-17!50;UBERON:0006238!1.07e-17!50;UBERON:0004121!2.31e-17!102;UBERON:0000924!2.31e-17!102;UBERON:0006601!2.31e-17!102;UBERON:0003056!3.46e-17!49;UBERON:0002616!5.14e-17!49;UBERON:0000073!1.13e-15!75;UBERON:0001016!1.13e-15!75;UBERON:0001017!1.26e-15!73;UBERON:0005743!1.26e-15!73;UBERON:0003080!2.81e-13!40;UBERON:0002780!1.27e-12!39;UBERON:0001890!1.27e-12!39;UBERON:0006240!1.27e-12!39;UBERON:0002020!2.78e-12!34;UBERON:0000153!1.81e-11!94;UBERON:0007811!6.77e-11!86;UBERON:0002791!1.41e-09!29;UBERON:0003528!1.41e-09!29;UBERON:0001893!1.41e-09!29;UBERON:0002021!1.15e-07!10;UBERON:0000411!1.15e-07!10;UBERON:0001950!1.15e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0002346,9.39e-25,64;UBERON:0003075,9.39e-25,64;UBERON:0007284,9.39e-25,64;UBERON:0000073,8.02e-23,54;UBERON:0010371,8.73e-22,73;UBERON:0001049,2.49e-21,52;UBERON:0005068,2.49e-21,52;UBERON:0006241,2.49e-21,52;UBERON:0007135,2.49e-21,52;UBERON:0003056,1.46e-19,49;UBERON:0004121,6.89e-19,95;UBERON:0000924,6.89e-19,95;UBERON:0006601,6.89e-19,95;UBERON:0001017,1.24e-18,73;UBERON:0001016,1.20e-17,75;UBERON:0000955,1.76e-17,47;UBERON:0006238,1.76e-17,47;UBERON:0002616,1.25e-16,46;UBERON:0010314,1.50e-15,92;UBERON:0003080,2.10e-14,40;UBERON:0002780,1.44e-13,39;UBERON:0001890,1.44e-13,39;UBERON:0006240,1.44e-13,39;UBERON:0002020,1.45e-13,34;UBERON:0003528,4.60e-10,29;UBERON:0002791,4.60e-10,29;UBERON:0001893,4.60e-10,29;UBERON:0002021,5.94e-10,10;UBERON:0000411,5.94e-10,10;UBERON:0001950,5.94e-10,10;UBERON:0003076,7.72e-08,12;UBERON:0003057,7.72e-08,12
|phase1_expression=4.32401887182944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.90902598404949,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.755380907853464,0.608261587317087,2.0190142737785,0.782391344348039,0,0.219686182734472,0.194429899074283,0.419959264876088,0,0,0,0,0,0,0,3.43937983461316,4.7609188134483,1.26766280701236,0.338844532069132,1.77858959222228,0,0,0,0,0,0.518448061542388,0.405017814995072,0.210324961351382,7.42692559449889,8.39300455616131,0.734944795289724,0.191690942036473,0,11.0115880999389,15.3224805702225,15.6678663921368,2.90149833006426,4.11694396210843,3.64639359389732,13.1216009530649,21.9477417912355,16.9606055032259,15.9099436155781,21.3557521198654,8.94717339961443,0.37863096666592,0.831287161174641,0,1.72084775396277,0,0.539703191637817,0,0,1.26399978118577,0.681721290312231,0.259786004602869,0.70667914902068,14.6477156567748,1.28326477414318,0,0,0,0,0,0.79928715803342,0.258937883647172,4.89859058913922,0.173485326766136,0.608930956624282,0.691846491768175,1.05505848386836,0.587943535678524,2.13633205260448,0,2.74738778147832,0,0.485300549842228,0.220841518460394,0.484875253135222,0,123.553496338873,107.865054008929,0,0,0,0,28.9095934051308,11.4375150704657,5.40313714085317,27.4642425903797,28.640131220997,18.7009240103604,20.9291229357407,0.611036183101898,0,0,1.89397670297827,1.43132487258974,4.82794419310293,5.76198815377118,6.17889753126432,5.71506592871154,5.25266253167884,6.37171727006156,8.53721123438752,0,1.32374256117473,1.40760899331159,1.7535658594206,2.22437799380478,0.696504333044333,1.4404749548556,0.398068533636986,0,0,0,0.414251545071004,0,0.720248245844059,0.473489471170421,0.196764231747404,0.617068451549513,0.697601834251224,0.804820204198858,0.233530684734339,0.329119699826961,0.820837320395476,0,0,0,0,9.46304768538573,2.57261530948211,0,0,3.41261200856374,1.62565670302307,0.515469845288373,0.605050573870028,0.889512175379481,1.52180500890047,0,0.164698954724011,0.502670417600539,0.795825888164603,0.58489226135736,0,0,0.199141273254367,0.189667900953082,0.571242563048644,0,0.203651327845314,0.193952487167626,0.420814919341911,0.0632365371242573,0,0,0.123397163921801,0.296452627087149,0,0.196558995113203,0.449724224769707,0,0.482354319504834,0.50925170356284,0,0.162135226775035,0,0,0.372140947668503,0.936113019343682,0.252578877947112,0.538192240565737,0,0,1.51593129416388,0.651859905768103,0.339490171550376,0.469380496577004,0.502518772325447,0,0,0.315270288212382,0.221464689648775,0.318909537314974,0,0,0,0,0,0,0,30.0229603277171,30.3578268273806,0,0,0,0,0.861693590931196,0.238968797952552,0,0,0.404810701674894,0,0,26.3483479465882,0,0.35613120733451,0.488660878060728,0.164970122972535,0,0,0,0.188605079755898,0,0.307435147943927,0.258428293168221,0.363533729477506,0.356497378384721,0,0,0,33.703520969625,1.08036656418786,0.517434735131018,1.28602221018955,1.41872186913819,2.14042581122485,3.9491764944509,3.04464949114599,0.23467170806371,0,0.441056796109924,0.16488625294148,0.161464426695906,0.241251699712623,0.238744688006273,0.492422699235184,0.291480836629851,29.2971977176605,0,0,0,0,0,0,0,0,0,0,2.53068794864908,4.06638934253697,3.78018692876304,4.18176592028937,2.83871332870031,2.56242258131159,0.909188012978695,0.26175594198403,0,0,0,0,0.330916980914195,0.194451188344048,0.129159823477731,0.337912250981556,0.117357238645754,0.13020438484395,0.104859344425711,0,0,0,0.608175645870493,0.102710957164827,0.129920822977795,0.358053391334963,0.39736270956253,0,0.590758108698309,0.100966449948148,0,0,0,0,0,0,0,0,0.167884616364078,0.579568782096571,0,0,0,0,22.5900737046827,25.7782132444019,17.1868654031819,20.2786755165551,15.0718154349541,15.107877947794,13.5004500046361,22.0657389579868,33.5325382648311,13.9795284172991,0.415149390336707,5.1873233542134,3.24393850932855,1.45864030240976,2.09613162627982,1.65459157605013,1.77797382241292,3.09052585858341,1.92551525755089,2.27427490587418,2.02783439912192,4.33840585187975,4.30750934361459,4.35371036353111,3.33125719942557,1.90517476513229,3.82418275618023,3.6652751888104,3.29668720642645,2.94397840268795,4.80016953339582,3.01708870470874,4.5302876089991,2.18019624948493,3.10560955370591,2.96151127620868,3.10977553883713,4.47218509444333,2.98769050460896,0.561142271657738,2.84724043498018,2.26560309463796,4.09231043169689,3.09873682371932,2.89359916471712,5.49583271463481,2.33931608445408,1.93383948643468,0.956441660344217,2.20591419119516,2.31867835620421
|short_description=p1@Cdh18
}}

Latest revision as of 15:57, 26 September 2015

Short description:p1@Cdh18
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Cdh18_5end
Coexpression cluster:MCL_coexpression_mm9:39
Association with transcript: 0bp_to_ENSMUST00000040427, ENSMUST00000164787, ENSMUST00000170626, NM_001081299, uc007vir.1, uc007vis.1_5end
EntrezGene:Cdh18
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Cdh18

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G74.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A37.91
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.76
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.61
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.02
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C33.44
Mouse Granule cells, donor2.CNhs12357.11731-123E34.76
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.52
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F17.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D58.39
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.73
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D311.01
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F315.32
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D715.67
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.90
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.12
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.65
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E413.12
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E521.95
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I616.96
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D615.91
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F621.36
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E18.95
Mouse Schwann, donor1.CNhs12507.11728-123D90.38
Mouse Schwann, donor2.CNhs12573.11746-123F90.83
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.68
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G614.65
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.80
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D74.90
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F51.06
adrenal gland, neonate N00.CNhs11191.1311-23C10.59
adrenal gland, neonate N25.CNhs11223.1377-27I32.14
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H12.75
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B2123.55
cerebellum, neonate N30.CNhs11135.1395-42I2107.87
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A428.91
corpus striatum, adult.CNhs10487.19-21D811.44
corpus striatum, neonate N00.CNhs11226.630-43F15.40
cortex, adult.CNhs10473.12-14D527.46
cortex, neonate N30.CNhs11107.1392-42F228.64
diencephalon, adult.CNhs10482.20-12F218.70
diencephalon, neonate N30.CNhs11201.1388-42B220.93
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.61
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.89
eyeball, embryo E12.CNhs11016.345-16C61.43
eyeball, embryo E14.CNhs10521.399-16E24.83
eyeball, embryo E15.CNhs10593.426-16C95.76
eyeball, embryo E17.CNhs11023.1261-18D46.18
eyeball, neonate N00.CNhs11207.633-15C65.72
eyeball, neonate N01.CNhs11140.1532-43E75.25
eyeball, neonate N02.CNhs11205.1551-44G86.37
eyeball, neonate N16.CNhs11188.777-19A28.54
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H21.32
forelimb, embryo E13.CNhs10589.384-1E21.41
forelimb, embryo E14.CNhs10577.413-26A81.75
forelimb, embryo E15.CNhs11007.437-20E72.22
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B51.44
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.62
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.82
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E89.46
hippocampus, neonate N00.CNhs11228.627-43G12.57
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I53.41
intestine, embryo E13.CNhs11010.381-16D51.63
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.89
intestine, embryo E18.CNhs10526.1289-20F71.52
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.57
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.42
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.94
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.54
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G21.52
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C230.02
medulla oblongata, neonate N30.CNhs11200.1396-42A330.36
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.86
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I926.35
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G833.70
pituitary gland, embryo E12.CNhs11018.346-16E61.08
pituitary gland, embryo E13.CNhs11009.370-44C70.52
pituitary gland, embryo E14.CNhs11037.398-44A51.29
pituitary gland, embryo E15.CNhs10592.427-16B91.42
pituitary gland, embryo E16.CNhs11036.449-43F62.14
pituitary gland, embryo E17.CNhs11039.1265-44F53.95
pituitary gland, neonate N00.CNhs11190.1308-22E93.04
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.24
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C929.30
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E32.53
stomach, embryo E15.CNhs10603.1252-16G84.07
stomach, embryo E16.CNhs11022.459-17D43.78
stomach, embryo E17.CNhs11006.1035-18D54.18
stomach, embryo E18.CNhs10999.1286-20C62.84
stomach, neonate N03.CNhs11193.1340-24B82.56
stomach, neonate N07.CNhs11210.718-18A90.91
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.59
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A122.59
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A225.78
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A317.19
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D720.28
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A415.07
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A515.11
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A613.50
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A722.07
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A833.53
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A913.98
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C95.19
whole body, embryo E13.CNhs10512.372-23H23.24
whole body, embryo E14.5.CNhs10578.420-27D21.46
whole body, embryo E14.CNhs10519.395-14B12.10
whole body, embryo E16.CNhs10514.453-14F21.65
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G54.34
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G54.31
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.35
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.82
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.67
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.94
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.80
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.02
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G54.53
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.18
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.11
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.96
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.11
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G54.47
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.99
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.85
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.09
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.10
whole body, embryo E17.5.CNhs10513.490-9F92.89
whole body, embryo E17.CNhs10517.475-3I55.50
whole body, embryo E18.CNhs10516.493-3B32.34
whole body, neonate N00.CNhs10525.657-19C21.93
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D12.21
whole body, neonate N10.CNhs10518.761-6B42.32





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.41e-0723
neuroblast (sensu Vertebrata)1.41e-0723

Uber anatomy
Ontology termp-valuen
neurectoderm9.39e-2564
neural plate9.39e-2564
presumptive neural plate9.39e-2564
regional part of nervous system8.02e-2354
ecto-epithelium8.73e-2273
neural tube2.49e-2152
neural rod2.49e-2152
future spinal cord2.49e-2152
neural keel2.49e-2152
pre-chordal neural plate1.46e-1949
ectoderm-derived structure6.89e-1995
ectoderm6.89e-1995
presumptive ectoderm6.89e-1995
central nervous system1.24e-1873
nervous system1.20e-1775
brain1.76e-1747
future brain1.76e-1747
regional part of brain1.25e-1646
structure with developmental contribution from neural crest1.50e-1592
anterior neural tube2.10e-1440
regional part of forebrain1.44e-1339
forebrain1.44e-1339
future forebrain1.44e-1339
gray matter1.45e-1334
brain grey matter4.60e-1029
regional part of telencephalon4.60e-1029
telencephalon4.60e-1029
occipital lobe5.94e-1010
visual cortex5.94e-1010
neocortex5.94e-1010
posterior neural tube7.72e-0812
chordal neural plate7.72e-0812
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