FFCP PHASE1:Hg19::chr4:175439145..175439188,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr4:175439145..175439188,+ | |||
|coexpression_cluster_id=C2786 | |||
|description=CAGE_peak_at_chr4:175439145..175439188,+ | |||
|id=chr4:175439145..175439188,+ | |||
|ontology_enrichment_celltype=CL:0002274!1.28e-14!5;CL:0000457!1.28e-14!5;CL:0002191!1.28e-14!5;CL:0000097!1.28e-14!5;CL:0000831!1.28e-14!5;CL:0002028!1.28e-14!5;CL:0002541!3.29e-14!3;CL:0001014!8.62e-10!2;CL:0001016!8.62e-10!2;CL:0000163!3.89e-08!9 | |||
|ontology_enrichment_celltype_v019=CL:0002541;7.08e-34;3!CL:0000097;9.93e-21;5!CL:0001014;1.29e-13;2!CL:0001016;1.29e-13;2!CL:0000163;5.52e-12;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,6.51e-34,3;CL:0000097,1.21e-20,5;CL:0002028,1.21e-20,5;CL:0001014,1.07e-13,2;CL:0001016,1.07e-13,2;CL:0000163,6.16e-12,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:8552;2.16e-26;1 | |||
|ontology_enrichment_disease_v019_2=DOID:8552,2.16e-26,1 | |||
|ontology_enrichment_uberon=UBERON:0000476!3.29e-14!3;UBERON:0000920!3.29e-14!3;UBERON:0003124!2.94e-10!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;7.08e-34;3!UBERON:0000920;7.08e-34;3!UBERON:0005631;6.44e-11;10!UBERON:0000158;6.44e-11;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,6.51e-34,3;UBERON:0003124,3.53e-15,7;UBERON:0005631,4.49e-08,14;UBERON:0000158,4.49e-08,14 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0.294605907474837,0,0,0,0.260118695119756,0,0,0.289803085735052,0.14828656316206,0,0,0,0,0,0,0,0,0.950452044448374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0.10366105501537,0,0,0,0,0,0,0,0.118306800039844,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0251139823042,0.414656231081544,0.288239906833923,1.00993946741104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.22724939116194,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,1.27600463892768,0.274792780205587,3.73124343213044,0,0,4.82013877510454,0,0,0,0,0.317873157960757,0,0,0.141353071433941,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,1.5476039091159,0,0,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0.246277562248017,0,0,0.146552233678082,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0.333694205676207,0,0,0.560544326627578,0,0,0,0.0714765441766563,0,0,0,0,0,0.17071847709395,0.691259661814092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | |||
|short_description=p@chr4:175439145..175439188,+ | |||
}} |
Latest revision as of 03:30, 30 July 2015
Short description: | p@chr4:175439145..175439188, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:175439145..175439188, + |
Coexpression cluster: | C2786_chorionic_Mast_chronic_acute_Hepatocyte_duodenum_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 6.51e-34 | 3 |
mast cell | 1.21e-20 | 5 |
basophil mast progenitor cell | 1.21e-20 | 5 |
CD1a-positive Langerhans cell | 1.07e-13 | 2 |
immature CD1a-positive Langerhans cell | 1.07e-13 | 2 |
endocrine cell | 6.16e-12 | 9 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 6.51e-34 | 3 |
chorion | 3.53e-15 | 7 |
extraembryonic membrane | 4.49e-08 | 14 |
membranous layer | 4.49e-08 | 14 |
Ontology term | p-value | n |
---|---|---|
chronic myeloid leukemia | 2.16e-26 | 1 |