FFCP PHASE1:Mm9::chr14:87816501..87816530,+: Difference between revisions
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{{FFCP|EntrezGene=219249|HGNC=|UniProt=E9Q0F4,Q91W18|association_with_transcript=28bp_to_ENSMUST00000170865_5end|description=CAGE_peak_4_at_Tdrd3_5end|id=chr14:87816501..87816530,+|ontology_enrichment_celltype=CL:0000540!8.32e-12!33;CL:0000047!8.32e-12!33;CL:0000031!8.32e-12!33;CL:0000404!8.32e-12!33;CL:0000393!9.03e-12!39;CL:0000211!9.03e-12!39;CL:0002321!2.07e-08!70;CL:0000220!2.07e-08!70;CL:0000221!2.82e-08!44;CL:0000133!2.82e-08!44;CL:0000117!3.23e-08!23;CL:0000337!3.23e-08!23;CL:0002319!3.79e-08!43;CL:0000055!8.45e-08!50|ontology_enrichment_celltype_v019_2=CL:0000393,4.88e-14,39;CL:0000211,4.88e-14,39;CL:0000540,5.33e-14,33;CL:0000047,5.33e-14,33;CL:0000031,5.33e-14,33;CL:0000404,5.33e-14,33;CL:0002321,9.83e-12,70;CL:0000221,1.58e-11,44;CL:0000133,1.58e-11,44;CL:0002319,2.27e-11,43;CL:0000117,7.26e-10,23;CL:0000337,7.26e-10,23;CL:0000723,7.71e-07,91;CL:0000048,7.71e-07,91|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=|phase1_expression=2.5623815536767,2.44282785347553,2.72999543633722,0,1.00179145989269,2.01455126294268,0.934450562382103,1.29123323441576,0.84473233291,0.468129052643987,0.513653904676515,2.15384829287408,0.684802919724823,1.66098764596095,0.333109761815663,0.404950534779652,0.699561878128147,0.946386496074713,1.23402990245165,0.42438965179803,3.40173160604279,1.98581902401771,3.13439746966722,0.47997726838022,0.68822784320151,1.14846392823004,0,0.430942465371778,0.760093677825496,1.26015064879965,0.665191531965914,0.635030673459631,1.23012957516914,0,1.1554064790051,0.831173226792462,0.408338712524738,0,0,0.523523743973798,0,0,0.971020706062307,2.14024590558481,1.62203089951223,0.734187008646726,1.56478268869608,0.218025156380447,0.219686182734472,0.388859798148567,0.279972843250725,0,0,0,0.672187598284928,0.257259436035947,2.0057340795713,1.03134418455488,2.02316460859598,2.64495489636016,0,0.338844532069132,0.889294796111139,1.3498495759221,0,0.7104801149461,1.49800055259202,0,4.45865332926454,5.40023753326763,6.52007380189284,2.28520787523043,2.87129103237098,2.57230678351403,1.53352753629178,0.919218786610021,1.10115880999389,1.65993539510744,1.99688493233117,2.50583946687368,1.82975287204819,1.56274011167028,1.67509799400829,0.56276261003168,1.22238598221448,2.94628585473668,2.42031857358475,3.72798891650601,1.59025005999687,1.5870027622425,1.73918693221007,0,0,1.61910957491345,1.29955283489534,0.896053774194671,0.983110940922263,2.04516387093669,1.81850203222008,1.41335829804136,1.26759077799012,1.28326477414318,0,7.11066703153331,1.5154372870785,0.506719730950197,0.505524445014783,1.48439043634778,0.517875767294343,0.445326417194474,0.520455980298408,0.304465478312141,0.230615497256059,1.3565037649736,1.64624189989987,0.502666365318702,0.494389935468748,0.578397427679647,0,1.13236794963186,0.883366073841574,0.484875253135222,0,0.585561594023094,0.628340120440365,0.255457055208591,0.958520996047362,0,2.03312363316904,0.149790639404823,0.915001205637253,1.88481528169297,0.521472960576829,1.27857728665165,0.62336413367868,0.324482526135515,1.32391173005411,0.870848794270651,1.76905930903572,0.420883711772948,1.43132487258974,0.459804208866946,0.180062129805349,1.65775299619287,0.884474488967262,0.512454881139399,0.843315521037559,0.517406741478031,1.5089759505299,1.70195472151037,2.28736461413134,0.876782929710299,1.66828349535359,2.43776516565517,1.85203922767149,0.995171334092466,1.40442637462647,0,0.568326998791185,0.621377317606506,1.64168241986767,1.2604344302271,0.473489471170421,0.787056926989615,1.23413690309903,1.16266972375204,0.804820204198858,0.700592054203017,0.658239399653922,1.31333971263276,0.891756905004413,0.730999937126662,0.658650345873152,0.671032093801859,0,1.9551876352064,0,0,1.70630600428187,2.32236671860439,0.515469845288373,0.403367049246685,0.22237804384487,0.190225626112559,1.42358718463353,0.658795818896044,1.50801125280162,0.994782360205754,0.974820435595601,0,0.864552199498777,0.995706366271836,0.379335801906163,1.37098215131675,0,0.814605311381257,0.775809948670503,1.40271639780637,0.758838445491087,1.18088118383682,1.41298855057237,1.23397163921801,0.296452627087149,0.166845105716094,0.196558995113203,0.899448449539415,0,0.482354319504834,0,0.287696137450811,0.810676133875177,0,1.43768206527355,0.744281895337007,0.936113019343682,0.505157755894224,0.717589654087649,0.964887042726734,0.923765950833023,0.757965647081939,0.651859905768103,1.18821560042632,1.40814148973101,0.502518772325447,0.714130922658041,1.36593553500459,1.10344600874334,1.7717175171902,1.11618338060241,1.47476983244164,0.172684981865896,0.723245292907558,0,0,1.47529281905711,0,0.160550589987792,0.820481806145422,0.819674726883377,0.757412781613119,1.89304931649754,1.56175497718655,2.15423397732799,1.91175038362042,2.67358408898873,2.26461224631066,1.21443210502468,2.92255857911312,0.790575555893047,0.963963949265421,0.851640511249612,1.78065603667255,1.14020871547503,0.164970122972535,0,1.45668381692989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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=219249 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=E9Q0F4,Q91W18 | |||
|association_with_transcript=28bp_to_ENSMUST00000170865_5end | |||
|cluster_id=chr14:87816501..87816530,+ | |||
|description=CAGE_peak_4_at_Tdrd3_5end | |||
|id=chr14:87816501..87816530,+ | |||
|ontology_enrichment_celltype=CL:0000540!8.32e-12!33;CL:0000047!8.32e-12!33;CL:0000031!8.32e-12!33;CL:0000404!8.32e-12!33;CL:0000393!9.03e-12!39;CL:0000211!9.03e-12!39;CL:0002321!2.07e-08!70;CL:0000220!2.07e-08!70;CL:0000221!2.82e-08!44;CL:0000133!2.82e-08!44;CL:0000117!3.23e-08!23;CL:0000337!3.23e-08!23;CL:0002319!3.79e-08!43;CL:0000055!8.45e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000393,4.88e-14,39;CL:0000211,4.88e-14,39;CL:0000540,5.33e-14,33;CL:0000047,5.33e-14,33;CL:0000031,5.33e-14,33;CL:0000404,5.33e-14,33;CL:0002321,9.83e-12,70;CL:0000221,1.58e-11,44;CL:0000133,1.58e-11,44;CL:0002319,2.27e-11,43;CL:0000117,7.26e-10,23;CL:0000337,7.26e-10,23;CL:0000723,7.71e-07,91;CL:0000048,7.71e-07,91 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=2.5623815536767,2.44282785347553,2.72999543633722,0,1.00179145989269,2.01455126294268,0.934450562382103,1.29123323441576,0.84473233291,0.468129052643987,0.513653904676515,2.15384829287408,0.684802919724823,1.66098764596095,0.333109761815663,0.404950534779652,0.699561878128147,0.946386496074713,1.23402990245165,0.42438965179803,3.40173160604279,1.98581902401771,3.13439746966722,0.47997726838022,0.68822784320151,1.14846392823004,0,0.430942465371778,0.760093677825496,1.26015064879965,0.665191531965914,0.635030673459631,1.23012957516914,0,1.1554064790051,0.831173226792462,0.408338712524738,0,0,0.523523743973798,0,0,0.971020706062307,2.14024590558481,1.62203089951223,0.734187008646726,1.56478268869608,0.218025156380447,0.219686182734472,0.388859798148567,0.279972843250725,0,0,0,0.672187598284928,0.257259436035947,2.0057340795713,1.03134418455488,2.02316460859598,2.64495489636016,0,0.338844532069132,0.889294796111139,1.3498495759221,0,0.7104801149461,1.49800055259202,0,4.45865332926454,5.40023753326763,6.52007380189284,2.28520787523043,2.87129103237098,2.57230678351403,1.53352753629178,0.919218786610021,1.10115880999389,1.65993539510744,1.99688493233117,2.50583946687368,1.82975287204819,1.56274011167028,1.67509799400829,0.56276261003168,1.22238598221448,2.94628585473668,2.42031857358475,3.72798891650601,1.59025005999687,1.5870027622425,1.73918693221007,0,0,1.61910957491345,1.29955283489534,0.896053774194671,0.983110940922263,2.04516387093669,1.81850203222008,1.41335829804136,1.26759077799012,1.28326477414318,0,7.11066703153331,1.5154372870785,0.506719730950197,0.505524445014783,1.48439043634778,0.517875767294343,0.445326417194474,0.520455980298408,0.304465478312141,0.230615497256059,1.3565037649736,1.64624189989987,0.502666365318702,0.494389935468748,0.578397427679647,0,1.13236794963186,0.883366073841574,0.484875253135222,0,0.585561594023094,0.628340120440365,0.255457055208591,0.958520996047362,0,2.03312363316904,0.149790639404823,0.915001205637253,1.88481528169297,0.521472960576829,1.27857728665165,0.62336413367868,0.324482526135515,1.32391173005411,0.870848794270651,1.76905930903572,0.420883711772948,1.43132487258974,0.459804208866946,0.180062129805349,1.65775299619287,0.884474488967262,0.512454881139399,0.843315521037559,0.517406741478031,1.5089759505299,1.70195472151037,2.28736461413134,0.876782929710299,1.66828349535359,2.43776516565517,1.85203922767149,0.995171334092466,1.40442637462647,0,0.568326998791185,0.621377317606506,1.64168241986767,1.2604344302271,0.473489471170421,0.787056926989615,1.23413690309903,1.16266972375204,0.804820204198858,0.700592054203017,0.658239399653922,1.31333971263276,0.891756905004413,0.730999937126662,0.658650345873152,0.671032093801859,0,1.9551876352064,0,0,1.70630600428187,2.32236671860439,0.515469845288373,0.403367049246685,0.22237804384487,0.190225626112559,1.42358718463353,0.658795818896044,1.50801125280162,0.994782360205754,0.974820435595601,0,0.864552199498777,0.995706366271836,0.379335801906163,1.37098215131675,0,0.814605311381257,0.775809948670503,1.40271639780637,0.758838445491087,1.18088118383682,1.41298855057237,1.23397163921801,0.296452627087149,0.166845105716094,0.196558995113203,0.899448449539415,0,0.482354319504834,0,0.287696137450811,0.810676133875177,0,1.43768206527355,0.744281895337007,0.936113019343682,0.505157755894224,0.717589654087649,0.964887042726734,0.923765950833023,0.757965647081939,0.651859905768103,1.18821560042632,1.40814148973101,0.502518772325447,0.714130922658041,1.36593553500459,1.10344600874334,1.7717175171902,1.11618338060241,1.47476983244164,0.172684981865896,0.723245292907558,0,0,1.47529281905711,0,0.160550589987792,0.820481806145422,0.819674726883377,0.757412781613119,1.89304931649754,1.56175497718655,2.15423397732799,1.91175038362042,2.67358408898873,2.26461224631066,1.21443210502468,2.92255857911312,0.790575555893047,0.963963949265421,0.851640511249612,1.78065603667255,1.14020871547503,0.164970122972535,0,1.45668381692989,0.906970670894253,1.32023555829129,0,0.614870295887855,1.80899805217755,0.363533729477506,1.78248689192361,1.26414703174326,1.05418608574999,2.06271086496374,0.340439605753788,2.52085531643834,1.4229455216103,1.92903331528433,0.886701168211368,1.42695054081656,0.493647061806363,1.2178597964584,0.23467170806371,0.21183207086382,0.882113592219848,0.49465875882444,1.61464426695906,1.38719727334758,0.954978752025092,0.984845398470368,0.874442509889552,0.370850604021019,0.512612642393558,1.23832120777933,0.925972636848558,0,0.820165366326151,1.14389086603261,0.679913719975421,0.979660166265606,0.414599921413271,0,1.73984796469624,1.21991680276109,1.62008011232702,0.836353184057875,1.31017538247707,1.75323650300267,0.743881101528023,0.523511883968059,0.90730481304255,0.621339313086926,6.20062232552609,2.0932316446157,0.992750942742586,0.972255941720238,1.54991788173277,1.85851738039856,1.5256441023948,1.43224823328345,0.838874755405687,2.89900944991207,3.16833006883652,0.316011120628178,1.01362607645082,0.8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| |||
|short_description=p4@Tdrd3 | |||
}} |
Latest revision as of 11:15, 26 September 2015
Short description: | p4@Tdrd3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Tdrd3_5end |
Coexpression cluster: | NA |
Association with transcript: | 28bp_to_ENSMUST00000170865_5end |
EntrezGene: | Tdrd3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 4.88e-14 | 39 |
electrically active cell | 4.88e-14 | 39 |
neuron | 5.33e-14 | 33 |
neuronal stem cell | 5.33e-14 | 33 |
neuroblast | 5.33e-14 | 33 |
electrically signaling cell | 5.33e-14 | 33 |
embryonic cell | 9.83e-12 | 70 |
ectodermal cell | 1.58e-11 | 44 |
neurectodermal cell | 1.58e-11 | 44 |
neural cell | 2.27e-11 | 43 |
CNS neuron (sensu Vertebrata) | 7.26e-10 | 23 |
neuroblast (sensu Vertebrata) | 7.26e-10 | 23 |
somatic stem cell | 7.71e-07 | 91 |
multi fate stem cell | 7.71e-07 | 91 |