FFCP PHASE1:Hg19::chr4:16036122..16036130,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr4:16036122..16036130,- | |||
|description=CAGE_peak_at_chr4:16036122..16036130,- | |||
|id=chr4:16036122..16036130,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002586;2.74e-12;3!CL:0000149;1.50e-09;4!CL:0000333;5.35e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002586,3.24e-12,3;CL:0000149,1.70e-09,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!1.33e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:4362;6.78e-08;5!DOID:169;7.17e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,6.55e-08,5;DOID:169,7.17e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0000200!1.03e-09!6;UBERON:0001869!3.71e-09!32;UBERON:0001893!1.57e-08!34;UBERON:0001950!9.49e-08!20;UBERON:0002791!3.58e-07!33;UBERON:0002619!5.39e-07!22;UBERON:0002020!6.32e-07!34;UBERON:0003528!6.32e-07!34;UBERON:0002780!8.18e-07!41;UBERON:0001890!8.18e-07!41;UBERON:0006240!8.18e-07!41 | |||
|ontology_enrichment_uberon_v019=UBERON:0006562;6.48e-18;2!UBERON:0001781;2.74e-12;3!UBERON:0001782;2.74e-12;3!UBERON:0000013;5.35e-08;5!UBERON:0002410;5.35e-08;5!UBERON:0000966;6.78e-08;5!UBERON:0005388;6.78e-08;5!UBERON:0001802;6.78e-08;5!UBERON:0000002;8.72e-07;6!UBERON:0001560;8.72e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001782,3.24e-12,3;UBERON:0005424,3.24e-12,3;UBERON:0001781,1.70e-09,4;UBERON:0000013,5.35e-08,5;UBERON:0002410,5.35e-08,5;UBERON:0000002,8.48e-07,6;UBERON:0001560,8.48e-07,6;UBERON:0000966,9.49e-07,6;UBERON:0005388,9.49e-07,6;UBERON:0001802,9.49e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30151357865721,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0.165284915360978,0,0,0.4046311234222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.537063524026827,0,0,0,0,0,0,0,0,0.174919999992391,0,0,0,0,0,0.583209226766509,0,0,0.120596438625408,0,0,0,0,0.10893846351899,1.39423744278603,0,0.91153644677601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0,0,0.0967563312890851,0.219267951258557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77169466726548,0,0,0,0,0,0,0,0,0.121499113316049,0,0,0,0,0,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0.327872630709804,0,0,0.122026264901963,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464033759878494,0,0,0,0,0,0,0,1.30497145982606,0.226705925512272,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0.279759015438889,0,0,0,4.4034463719651,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0.252071696221718,0,0.161475645631851,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0.546974809018219,0,0,0.175871244359621,3.44958554626907,0,0,0,0,0,0,0.171488009437418,0,0.0657727735628491,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269475606319761,0,0,0,0,0,0 | |||
|short_description=p@chr4:16036122..16036130,- | |||
}} |
Latest revision as of 02:55, 30 July 2015
Short description: | p@chr4:16036122..16036130, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:16036122..16036130, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 3.24e-12 | 3 |
visual pigment cell | 1.70e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
pigmented layer of retina | 3.24e-12 | 3 |
presumptive retinal pigmented epithelium | 3.24e-12 | 3 |
layer of retina | 1.70e-09 | 4 |
sympathetic nervous system | 5.35e-08 | 5 |
autonomic nervous system | 5.35e-08 | 5 |
uterine cervix | 8.48e-07 | 6 |
neck of organ | 8.48e-07 | 6 |
retina | 9.49e-07 | 6 |
photoreceptor array | 9.49e-07 | 6 |
posterior segment of eyeball | 9.49e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 6.55e-08 | 5 |
neuroendocrine tumor | 7.17e-07 | 6 |