FFCP PHASE1:Hg19::chr4:154681317..154681353,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=285533 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27735 | |||
|TSSclassifier=strong | |||
|UniProt=Q8N4F7,Q8NB61 | |||
|association_with_transcript=33bp_to_ENST00000347063,NM_173662,uc003int.2,uc003inu.1_5end | |||
|cluster_id=chr4:154681317..154681353,- | |||
|description=CAGE_peak_2_at_RNF175_5end | |||
|id=chr4:154681317..154681353,- | |||
|ontology_enrichment_celltype=CL:0002322!5.67e-08!5 | |||
|ontology_enrichment_celltype_v019=CL:0002322;4.18e-12;5!CL:0002321;3.86e-08;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,7.59e-12,5;CL:0000047,1.34e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;8.35e-09;82!UBERON:0010122;1.02e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002780!9.47e-46!41;UBERON:0001890!9.47e-46!41;UBERON:0006240!9.47e-46!41;UBERON:0001049!4.61e-45!57;UBERON:0005068!4.61e-45!57;UBERON:0006241!4.61e-45!57;UBERON:0007135!4.61e-45!57;UBERON:0001017!1.54e-44!82;UBERON:0003080!2.37e-44!42;UBERON:0002020!4.04e-43!34;UBERON:0003528!4.04e-43!34;UBERON:0001893!4.04e-43!34;UBERON:0005743!4.27e-43!86;UBERON:0002791!1.18e-41!33;UBERON:0001869!1.38e-41!32;UBERON:0002616!5.34e-41!59;UBERON:0000073!9.83e-41!94;UBERON:0001016!9.83e-41!94;UBERON:0000955!1.94e-37!69;UBERON:0006238!1.94e-37!69;UBERON:0002346!1.12e-33!90;UBERON:0000956!8.01e-32!25;UBERON:0000203!8.01e-32!25;UBERON:0003075!3.41e-31!86;UBERON:0007284!3.41e-31!86;UBERON:0003056!6.31e-31!61;UBERON:0002619!5.24e-29!22;UBERON:0001950!1.13e-26!20;UBERON:0000033!1.63e-22!123;UBERON:0000924!9.93e-22!173;UBERON:0006601!9.93e-22!173;UBERON:0007023!1.74e-21!115;UBERON:0000153!1.16e-20!129;UBERON:0007811!1.16e-20!129;UBERON:0004121!7.57e-20!169;UBERON:0002420!3.71e-13!9;UBERON:0007245!3.71e-13!9;UBERON:0010009!3.71e-13!9;UBERON:0010011!3.71e-13!9;UBERON:0000454!3.71e-13!9;UBERON:0002308!1.42e-12!9;UBERON:0000125!1.42e-12!9;UBERON:0009663!2.10e-10!7;UBERON:0000200!4.99e-10!6;UBERON:0001871!1.83e-09!7;UBERON:0000349!3.66e-08!5;UBERON:0001872!4.06e-08!5;UBERON:0002021!4.49e-08!5;UBERON:0000369!1.54e-07!4;UBERON:0002435!1.54e-07!4;UBERON:0000204!1.54e-07!4;UBERON:0010082!1.54e-07!4;UBERON:0000025!2.32e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;6.06e-60;32!UBERON:0002619;2.64e-57;22!UBERON:0001950;5.56e-57;20!UBERON:0001893;2.12e-56;34!UBERON:0002791;1.24e-55;32!UBERON:0000956;2.20e-55;25!UBERON:0000203;2.20e-55;25!UBERON:0003528;3.84e-52;34!UBERON:0002020;3.84e-52;34!UBERON:0002780;8.45e-38;41!UBERON:0001890;8.45e-38;41!UBERON:0000073;1.19e-28;53!UBERON:0002616;1.19e-28;53!UBERON:0000200;1.52e-21;6!UBERON:0000955;4.98e-19;68!UBERON:0001871;4.75e-18;6!UBERON:0002021;2.71e-17;5!UBERON:0001017;1.93e-16;75!UBERON:0000369;6.68e-16;4!UBERON:0002435;6.68e-16;4!UBERON:0000204;6.68e-16;4!UBERON:0001016;3.50e-15;83!UBERON:0002420;9.14e-15;9!UBERON:0007245;9.14e-15;9!UBERON:0010009;9.14e-15;9!UBERON:0010011;9.14e-15;9!UBERON:0000454;9.14e-15;9!UBERON:0005383;2.10e-12;3!UBERON:0005382;2.10e-12;3!UBERON:0000349;5.66e-12;5!UBERON:0001870;7.77e-12;3!UBERON:0001872;1.14e-11;5!UBERON:0009663;4.30e-09;7!UBERON:0001873;1.02e-08;2!UBERON:0002771;2.55e-08;2!UBERON:0001876;2.55e-08;2!UBERON:0002702;2.55e-08;2!UBERON:0000125;4.58e-07;9!UBERON:0002308;4.58e-07;9!UBERON:0007023;6.28e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,3.78e-68,32;UBERON:0001893,7.25e-64,34;UBERON:0002791,1.24e-62,32;UBERON:0003528,1.11e-58,34;UBERON:0002020,1.11e-58,34;UBERON:0002619,1.01e-57,22;UBERON:0001950,2.24e-57,20;UBERON:0002780,1.65e-56,41;UBERON:0001890,1.65e-56,41;UBERON:0003080,1.65e-56,41;UBERON:0006240,1.65e-56,41;UBERON:0000956,1.32e-55,25;UBERON:0000203,1.32e-55,25;UBERON:0000073,2.21e-49,53;UBERON:0002616,2.21e-49,53;UBERON:0001049,2.17e-46,56;UBERON:0005068,2.17e-46,56;UBERON:0006241,2.17e-46,56;UBERON:0007135,2.17e-46,56;UBERON:0001016,2.79e-45,89;UBERON:0001017,2.90e-45,81;UBERON:0000955,3.87e-39,68;UBERON:0006238,3.87e-39,68;UBERON:0003056,5.08e-36,61;UBERON:0002346,3.41e-30,86;UBERON:0003075,1.56e-29,82;UBERON:0007284,1.56e-29,82;UBERON:0000200,5.47e-22,6;UBERON:0010371,8.19e-22,104;UBERON:0004121,3.57e-21,171;UBERON:0000924,3.57e-21,171;UBERON:0006601,3.57e-21,171;UBERON:0001871,3.43e-18,6;UBERON:0002021,2.83e-17,5;UBERON:0010314,3.94e-17,132;UBERON:0007023,1.14e-16,114;UBERON:0000369,5.48e-16,4;UBERON:0002435,5.48e-16,4;UBERON:0000204,5.48e-16,4;UBERON:0010082,5.48e-16,4;UBERON:0002420,7.24e-15,9;UBERON:0007245,7.24e-15,9;UBERON:0010009,7.24e-15,9;UBERON:0010011,7.24e-15,9;UBERON:0000454,7.24e-15,9;UBERON:0011216,4.16e-14,223;UBERON:0005383,2.12e-12,3;UBERON:0005382,2.12e-12,3;UBERON:0000349,3.92e-12,5;UBERON:0001870,6.50e-12,3;UBERON:0001872,8.04e-12,5;UBERON:0009663,3.85e-09,7;UBERON:0001873,1.03e-08,2;UBERON:0010122,1.03e-08,2;UBERON:0000025,1.05e-08,192;UBERON:0002771,1.34e-08,2;UBERON:0002702,2.09e-08,2;UBERON:0001876,2.17e-08,2;UBERON:0000125,4.22e-07,9;UBERON:0002308,4.22e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14494394852423,0.273748850145768,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,1.10799081706375,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37696839079683,0,0.205601498999509,0.334372990781356,6.19252306603822,6.15482147455153,1.94826728407911,0,0.294605907474837,0.664601683750863,0,0,0,0,0,0,1.77943875794473,2.1403266247177,5.22677619024884,0,0,0,0.506039384039006,0.637130828648193,0.651083453856419,0,0.301150238155546,0.383959833463255,0,0.236777252044017,0,0,0,0.289648807765598,0,0,0,0,0,0,0,0,0.378139268656271,0,0.087834785693126,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23486899728753,0,0.280901613404497,0.408308342509787,0.368502951935304,0.103325781175765,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365921118388786,3.04818467139416,2.67246068599892,1.24393266018445,1.00928340350251,3.6497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0.215627574859517,0.641715181398742,0.508189248444927,2.60279707715243,0,1.67516265334349,0,0,0,0,0.24538298343828,0,0,0,0,0,0,0,0,0,0,0,0.173767228936166,0,0,1.44737618286021,0.215714200818617,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0.784349769176855,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0.183138929636687,0.577566499444116,0,0,0,0.096670718292122,0,0,0,0.107420244868274,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0.649243880549111,0,10.9552645935932,0,0,0,0,0.201799707191048,0,0,1.22896305723383,0.671028323677248,1.33479313369527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98244294329889,1.40669416410513,0,0,0.211125408127993,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0.969332746095218,1.39152147242777,0,0,0,0,0.1137934482855,0,0,0,0.291604613383254,0,2.65722415744152,2.53252521113357,0,0.552896299656123,1.77328571372128,2.4132393686937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202203398942031,0,2.10838001152805,0,0,0,0,0,1.22429104652196,0.189559738885464,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0.17472666824203,0,0,0,0,0,0,0.451961481561065,0,0.19871461170299,2.59574263419103,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0.600420288709789,0.684526894459965,0,0,0,0,0,0,0,0,0,0.268733889946905,0,0,0,0,0,0,0,1.59045937961861,0.408610218334727,1.92903778158023,2.20063098555574,0.415440338029185,0,0,2.61223093629506,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.646414781807753,0.52893040697076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65820453990096,2.80660409274515,1.502291168478,0,0.221858103073705,0.496771223531068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7973596699725,0,0,0,0.327609848846413,0,0,0,0.533458648470704,0,0,0,0,0,1.40683808434017,0,1.88719130227076,0,0.509197589862076,2.97604888142356,0,0,0,0,0,0,0,2.6976274540513,1.41696576325585,1.27707087245721,1.23069818544453,1.76450187355203,1.86724581653388,2.58361033010962,0,0,0,0,0,0,0,0.596748666348824,0,0,0,0,0,0,2.4988906308806,2.34323429584154,0.620060389503552,1.64881106504158,1.64092442705466,0,0.496211178389294,0.527613733078862,0,0,0.336283722218824,0,0.227662191351298,0,0,0,1.42736439251347,1.77586488619693,0,0,0,3.61365856806804,0,0,0,0,0.142953088353313,0,0,0.695433089210318,0,0.62164849248911,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0.233939463462106,0,0,0,0,0.150962843566674,0,0,0,0,0,0.392616934229891,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,1.49581278420012,0.872701380680755,0,0,0,0,0,0.109265571963696,0,0,0.26721740526556,0,0,0,0,0.829169439458779,0.517164979309476,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0.332660356546013,0.89543595472072,0.106727345877715,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p2@RNF175 | |||
}} |
Latest revision as of 05:29, 16 September 2015
Short description: | p2@RNF175 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RNF175_5end |
Coexpression cluster: | NA |
Association with transcript: | 33bp_to_ENST00000347063, NM_173662, uc003int.2, uc003inu.1_5end |
EntrezGene: | RNF175 |
HGNC: | 27735 |
UniProt: | Q8N4F7Q8NB61 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 7.59e-12 | 5 |
neuronal stem cell | 1.34e-07 | 8 |