FFCP PHASE1:Hg19::chr4:144106080..144106144,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84640 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20067 | |||
|TSSclassifier=strong | |||
|UniProt=Q8NB14 | |||
|association_with_transcript=0bp_to_ENST00000307017_5end | |||
|cluster_id=chr4:144106080..144106144,+ | |||
|description=CAGE_peak_1_at_USP38_5end | |||
|id=chr4:144106080..144106144,+ | |||
|ontology_enrichment_celltype=CL:0000738!8.59e-25!140;CL:0002031!1.81e-20!124;CL:0002087!2.76e-19!119;CL:0000037!1.94e-18!172;CL:0000566!1.94e-18!172;CL:0002032!1.44e-16!165;CL:0000837!1.44e-16!165;CL:0000988!6.53e-16!182;CL:0000766!2.61e-13!76;CL:0002057!9.81e-13!42;CL:0000839!9.72e-11!70;CL:0000860!2.26e-10!45;CL:0000838!3.30e-10!52;CL:0000557!3.38e-10!71;CL:0000542!1.08e-09!53;CL:0000051!1.08e-09!53;CL:0002009!4.39e-09!65;CL:0002194!4.54e-09!63;CL:0000576!4.54e-09!63;CL:0000040!4.54e-09!63;CL:0000559!4.54e-09!63;CL:0000791!4.08e-08!18;CL:0000789!4.08e-08!18;CL:0002420!4.08e-08!18;CL:0002419!4.08e-08!18;CL:0000790!4.08e-08!18;CL:0000763!5.38e-08!112;CL:0000049!5.38e-08!112;CL:0000084!6.45e-07!25;CL:0000827!6.45e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.29e-09;33!CL:0002057;3.29e-09;33!CL:0000576;2.37e-08;48!CL:0000473;2.80e-08;39!CL:0000234;2.80e-08;39!CL:0000791;5.33e-08;18!CL:0000789;5.33e-08;18!CL:0002419;5.33e-08;18!CL:0000766;7.58e-08;69!CL:0002087;2.19e-07;104!CL:0000084;7.62e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,9.22e-27,136;CL:0002031,2.41e-22,120;CL:0002087,3.89e-21,115;CL:0000037,7.45e-20,168;CL:0002032,6.35e-18,161;CL:0000837,6.35e-18,161;CL:0000988,1.36e-17,177;CL:0000766,2.98e-15,72;CL:0000473,2.91e-13,48;CL:0000234,2.91e-13,48;CL:0000860,9.81e-13,42;CL:0002057,9.81e-13,42;CL:0000839,1.68e-12,66;CL:0000557,7.07e-12,67;CL:0002194,9.59e-11,59;CL:0000576,9.59e-11,59;CL:0000040,9.59e-11,59;CL:0000559,9.59e-11,59;CL:0002009,1.00e-10,61;CL:0000838,3.30e-10,52;CL:0000542,1.08e-09,53;CL:0000051,1.08e-09,53;CL:0000763,4.79e-09,108;CL:0000049,4.79e-09,108;CL:0000791,4.08e-08,18;CL:0000789,4.08e-08,18;CL:0002420,4.08e-08,18;CL:0002419,4.08e-08,18;CL:0000790,4.08e-08,18;CL:0000084,6.45e-07,25;CL:0000827,6.45e-07,25 | |||
|ontology_enrichment_development_v019=CL:0002057;1.55e-09;42!CL:0000790;5.33e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.31e-20!115;UBERON:0002390!6.36e-12!102;UBERON:0003061!6.36e-12!102;UBERON:0002193!1.67e-10!112;UBERON:0002371!4.36e-08!80;UBERON:0001474!1.79e-07!86;UBERON:0001049!6.31e-07!57;UBERON:0005068!6.31e-07!57;UBERON:0006241!6.31e-07!57;UBERON:0007135!6.31e-07!57 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.10e-19,114;UBERON:0002390,2.15e-13,98;UBERON:0003061,2.15e-13,98;UBERON:0002193,8.97e-12,108;UBERON:0002371,2.13e-09,76;UBERON:0002405,2.15e-09,93;UBERON:0001474,1.18e-08,82;UBERON:0004765,9.70e-08,90;UBERON:0001434,5.41e-07,100 | |||
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| |||
|short_description=p1@USP38 | |||
}} |
Latest revision as of 21:24, 15 September 2015
Short description: | p1@USP38 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_USP38_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000307017_5end |
EntrezGene: | USP38 |
HGNC: | 20067 |
UniProt: | Q8NB14 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.10e-19 | 114 |
hematopoietic system | 2.15e-13 | 98 |
blood island | 2.15e-13 | 98 |
hemolymphoid system | 8.97e-12 | 108 |
bone marrow | 2.13e-09 | 76 |
immune system | 2.15e-09 | 93 |
bone element | 1.18e-08 | 82 |
skeletal element | 9.70e-08 | 90 |
skeletal system | 5.41e-07 | 100 |