FFCP PHASE1:Hg19::chr4:141016098..141016114,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr4:141016098..141016114,- | |||
|coexpression_cluster_id=C2422 | |||
|description=CAGE_peak_at_chr4:141016098..141016114,- | |||
|id=chr4:141016098..141016114,- | |||
|ontology_enrichment_celltype=CL:0002057!1.06e-31!42;CL:0000860!3.48e-29!45;CL:0000766!3.21e-28!76;CL:0000839!2.97e-24!70;CL:0000557!8.09e-24!71;CL:0000738!9.15e-24!140;CL:0000763!9.68e-23!112;CL:0000049!9.68e-23!112;CL:0000037!1.20e-22!172;CL:0000566!1.20e-22!172;CL:0000988!7.88e-21!182;CL:0002032!8.90e-20!165;CL:0000837!8.90e-20!165;CL:0002194!9.14e-19!63;CL:0000576!9.14e-19!63;CL:0000040!9.14e-19!63;CL:0000559!9.14e-19!63;CL:0002031!3.23e-18!124;CL:0002009!5.07e-18!65;CL:0002087!8.90e-18!119;CL:0002274!3.24e-11!5;CL:0000457!3.24e-11!5;CL:0002191!3.24e-11!5;CL:0000097!3.24e-11!5;CL:0000831!3.24e-11!5;CL:0002028!3.24e-11!5;CL:0000842!9.45e-11!3;CL:0000623!3.00e-10!3;CL:0000825!3.00e-10!3;CL:0002393!5.25e-09!9;CL:0002397!5.25e-09!9;CL:0000224!3.74e-08!4;CL:0000134!7.44e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0000097;3.85e-33;5!CL:0002393;1.02e-27;6!CL:0002397;1.02e-27;6!CL:0000226;7.01e-25;3!CL:0000842;7.01e-25;3!CL:0000163;9.20e-19;9!CL:0000766;6.81e-12;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,4.31e-33,5;CL:0002028,4.31e-33,5;CL:0000226,4.31e-25,3;CL:0000842,4.31e-25,3;CL:0000163,9.79e-19,9;CL:0002393,9.79e-19,9;CL:0002397,9.79e-19,9;CL:0000839,8.94e-17,66;CL:0000557,1.60e-16,67;CL:0000766,2.31e-15,72;CL:0000738,2.78e-15,136;CL:0000037,2.92e-12,168;CL:0000988,1.32e-11,177;CL:0002031,1.68e-11,120;CL:0000860,8.02e-11,42;CL:0002057,8.02e-11,42;CL:0000763,3.93e-10,108;CL:0000049,3.93e-10,108;CL:0002087,1.77e-09,115;CL:0000473,1.78e-09,48;CL:0000234,1.78e-09,48;CL:0002032,2.01e-08,161;CL:0000837,2.01e-08,161;CL:0002194,1.38e-07,59;CL:0000576,1.38e-07,59;CL:0000040,1.38e-07,59;CL:0000559,1.38e-07,59;CL:0002009,2.42e-07,61 | |||
|ontology_enrichment_development_v019=CL:0002057;3.84e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.00e-20!102;UBERON:0003061!1.00e-20!102;UBERON:0002371!2.14e-20!80;UBERON:0002193!1.37e-19!112;UBERON:0001474!1.64e-18!86;UBERON:0004765!8.61e-15!101;UBERON:0001434!8.61e-15!101;UBERON:0002405!1.23e-14!115;UBERON:0003081!1.28e-08!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.32e-17,98;UBERON:0003061,1.32e-17,98;UBERON:0002193,6.17e-16,108;UBERON:0002371,1.53e-14,76;UBERON:0001474,1.85e-13,82;UBERON:0004765,3.10e-12,90;UBERON:0002405,7.89e-12,93;UBERON:0001434,5.64e-11,100;UBERON:0003081,3.46e-08,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0,0.77408061658038,0,0,0,0,0,0,2.76997704265939,1.40381113229099,1.08505435357926,0,0,0,0.290796477559129,0,0.485168122375632,0.232429036905685,0,0,0.28769239232215,0,0.709446689665756,1.03423704220986,0,1.35426486594342,0,0,0.224723484445085,0,0.641858054152187,0.639337125799041,0,0,0.852449501065388,0,0,0.622822248995575,0,0,0.217188844705117,0,0.368277635987565,0,0.211255286311942,0.212604299965044,0,0.673971786878971,0.300353785683013,0.48217676009124,0,0,0,0,0,0,0,0,0,0,0,0,1.17447437874188,0,0,0.560508562981536,0,0.196709770113833,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264145302039678,1.24396869324463,5.04419836959365,1.13618190083742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0.431255149719035,0.513372145118994,0,0,0.773288812777695,0,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24060815673732,1.50999940573032,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0.556812347790485,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470940769185074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5085370753095,0,0,0,0,0.164185041498678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0.138348634936231,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218419276384028,0,0,0,0,0,0.157723490002507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0.397901550322736,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr4:141016098..141016114,- | |||
}} |
Latest revision as of 01:48, 30 July 2015
Short description: | p@chr4:141016098..141016114, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:141016098..141016114, - |
Coexpression cluster: | C2422_CD14_Mast_Eosinophils_Neutrophils_CD19_Peripheral_Alveolar |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 4.31e-33 | 5 |
basophil mast progenitor cell | 4.31e-33 | 5 |
single nucleate cell | 4.31e-25 | 3 |
mononuclear cell | 4.31e-25 | 3 |
endocrine cell | 9.79e-19 | 9 |
intermediate monocyte | 9.79e-19 | 9 |
CD14-positive, CD16-positive monocyte | 9.79e-19 | 9 |
myeloid lineage restricted progenitor cell | 8.94e-17 | 66 |
granulocyte monocyte progenitor cell | 1.60e-16 | 67 |
myeloid leukocyte | 2.31e-15 | 72 |
leukocyte | 2.78e-15 | 136 |
hematopoietic stem cell | 2.92e-12 | 168 |
hematopoietic cell | 1.32e-11 | 177 |
hematopoietic lineage restricted progenitor cell | 1.68e-11 | 120 |
classical monocyte | 8.02e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.02e-11 | 42 |
myeloid cell | 3.93e-10 | 108 |
common myeloid progenitor | 3.93e-10 | 108 |
nongranular leukocyte | 1.77e-09 | 115 |
defensive cell | 1.78e-09 | 48 |
phagocyte | 1.78e-09 | 48 |
hematopoietic oligopotent progenitor cell | 2.01e-08 | 161 |
hematopoietic multipotent progenitor cell | 2.01e-08 | 161 |
monopoietic cell | 1.38e-07 | 59 |
monocyte | 1.38e-07 | 59 |
monoblast | 1.38e-07 | 59 |
promonocyte | 1.38e-07 | 59 |
macrophage dendritic cell progenitor | 2.42e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.32e-17 | 98 |
blood island | 1.32e-17 | 98 |
hemolymphoid system | 6.17e-16 | 108 |
bone marrow | 1.53e-14 | 76 |
bone element | 1.85e-13 | 82 |
skeletal element | 3.10e-12 | 90 |
immune system | 7.89e-12 | 93 |
skeletal system | 5.64e-11 | 100 |
lateral plate mesoderm | 3.46e-08 | 203 |