FFCP PHASE1:Hg19::chr4:103790191..103790204,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=493856 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24212 | |||
|TSSclassifier=strong | |||
|UniProt=Q8N5K1 | |||
|association_with_transcript=56bp_to_ENST00000273986,NM_001008388,uc003hwt.3_5end | |||
|cluster_id=chr4:103790191..103790204,+ | |||
|description=CAGE_peak_3_at_CISD2_5end | |||
|id=chr4:103790191..103790204,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002616!1.32e-08!59;UBERON:0000955!2.07e-08!69;UBERON:0006238!2.07e-08!69;UBERON:0001017!2.66e-08!82;UBERON:0000119!3.12e-08!312;UBERON:0000483!6.07e-08!309;UBERON:0005743!7.02e-08!86;UBERON:0001049!1.09e-07!57;UBERON:0005068!1.09e-07!57;UBERON:0006241!1.09e-07!57;UBERON:0007135!1.09e-07!57;UBERON:0000025!2.34e-07!194;UBERON:0000073!2.79e-07!94;UBERON:0001016!2.79e-07!94;UBERON:0000481!9.14e-07!347 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,4.40e-11,132;UBERON:0000955,1.74e-08,68;UBERON:0006238,1.74e-08,68;UBERON:0001017,2.02e-08,81;UBERON:0001016,5.57e-08,89;UBERON:0001049,1.19e-07,56;UBERON:0005068,1.19e-07,56;UBERON:0006241,1.19e-07,56;UBERON:0007135,1.19e-07,56;UBERON:0000119,1.78e-07,309;UBERON:0000073,1.97e-07,53;UBERON:0002616,1.97e-07,53;UBERON:0000025,3.07e-07,192;UBERON:0000483,3.37e-07,306 | |||
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| |||
|short_description=p3@CISD2 | |||
}} |
Latest revision as of 05:21, 20 September 2015
Short description: | p3@CISD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CISD2_5end |
Coexpression cluster: | NA |
Association with transcript: | 56bp_to_ENST00000273986, NM_001008388, uc003hwt.3_5end |
EntrezGene: | CISD2 |
HGNC: | 24212 |
UniProt: | Q8N5K1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 4.40e-11 | 132 |
brain | 1.74e-08 | 68 |
future brain | 1.74e-08 | 68 |
central nervous system | 2.02e-08 | 81 |
nervous system | 5.57e-08 | 89 |
neural tube | 1.19e-07 | 56 |
neural rod | 1.19e-07 | 56 |
future spinal cord | 1.19e-07 | 56 |
neural keel | 1.19e-07 | 56 |
cell layer | 1.78e-07 | 309 |
regional part of nervous system | 1.97e-07 | 53 |
regional part of brain | 1.97e-07 | 53 |
tube | 3.07e-07 | 192 |
epithelium | 3.37e-07 | 306 |