FFCP PHASE1:Mm9::chr14:26427376..26427419,+: Difference between revisions
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{{FFCP|EntrezGene=328365|HGNC=|MCL_coexpression_id=22|UniProt=E0CX95|association_with_transcript=52bp_to_ENSMUST00000160229_5end|description=CAGE_peak_4_at_Zmiz1_5end|id=chr14:26427376..26427419,+|ontology_enrichment_celltype=CL:0000540!2.45e-20!33;CL:0000047!2.45e-20!33;CL:0000031!2.45e-20!33;CL:0000404!2.45e-20!33;CL:0000117!2.25e-15!23;CL:0000337!2.25e-15!23;CL:0000221!3.02e-15!44;CL:0000133!3.02e-15!44;CL:0002319!3.14e-15!43;CL:0000393!8.24e-13!39;CL:0000211!8.24e-13!39;CL:0000055!2.04e-09!50|ontology_enrichment_celltype_v019_2=CL:0000540,8.36e-21,33;CL:0000047,8.36e-21,33;CL:0000031,8.36e-21,33;CL:0000404,8.36e-21,33;CL:0000221,5.63e-16,44;CL:0000133,5.63e-16,44;CL:0002319,5.80e-16,43;CL:0000117,1.02e-15,23;CL:0000337,1.02e-15,23;CL:0000393,9.19e-14,39;CL:0000211,9.19e-14,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!9.60e-31!73;UBERON:0005743!9.60e-31!73;UBERON:0000073!3.98e-30!75;UBERON:0001016!3.98e-30!75;UBERON:0004121!1.42e-29!102;UBERON:0000924!1.42e-29!102;UBERON:0006601!1.42e-29!102;UBERON:0002346!3.71e-26!71;UBERON:0003075!3.71e-26!71;UBERON:0007284!3.71e-26!71;UBERON:0001049!6.60e-22!52;UBERON:0005068!6.60e-22!52;UBERON:0006241!6.60e-22!52;UBERON:0007135!6.60e-22!52;UBERON:0000033!1.02e-20!63;UBERON:0000955!4.50e-20!50;UBERON:0006238!4.50e-20!50;UBERON:0002616!1.09e-19!49;UBERON:0003056!1.38e-19!49;UBERON:0003080!1.23e-17!40;UBERON:0002780!4.86e-17!39;UBERON:0001890!4.86e-17!39;UBERON:0006240!4.86e-17!39;UBERON:0002020!1.62e-16!34;UBERON:0002791!2.79e-13!29;UBERON:0003528!2.79e-13!29;UBERON:0001893!2.79e-13!29;UBERON:0007811!9.87e-11!86;UBERON:0000153!9.25e-10!94;UBERON:0000956!4.70e-09!21;UBERON:0001869!4.70e-09!21;UBERON:0000203!4.70e-09!21;UBERON:0002619!8.51e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.23e-32,73;UBERON:0001016,2.73e-31,75;UBERON:0004121,8.62e-30,95;UBERON:0000924,8.62e-30,95;UBERON:0006601,8.62e-30,95;UBERON:0002346,8.72e-27,64;UBERON:0003075,8.72e-27,64;UBERON:0007284,8.72e-27,64;UBERON:0010371,3.69e-25,73;UBERON:0000073,7.36e-24,54;UBERON:0001049,1.28e-22,52;UBERON:0005068,1.28e-22,52;UBERON:0006241,1.28e-22,52;UBERON:0007135,1.28e-22,52;UBERON:0010314,1.45e-21,92;UBERON:0003056,4.97e-20,49;UBERON:0000955,6.13e-19,47;UBERON:0006238,6.13e-19,47;UBERON:0002616,1.49e-18,46;UBERON:0003080,4.97e-18,40;UBERON:0002780,2.03e-17,39;UBERON:0001890,2.03e-17,39;UBERON:0006240,2.03e-17,39;UBERON:0002020,6.96e-17,34;UBERON:0003528,1.45e-13,29;UBERON:0002791,1.45e-13,29;UBERON:0001893,1.45e-13,29;UBERON:0000956,3.10e-09,21;UBERON:0001869,3.10e-09,21;UBERON:0000203,3.10e-09,21;UBERON:0002619,6.36e-07,17|phase1_expression=7.04654927261093,0.348975407639361,3.18499467572675,0,0,0.503637815735669,0.700837921786577,1.03298658753261,1.68946466582,0.936258105287974,0.171217968225505,1.27635454392538,0.856003649656029,1.83582845079895,1.66554880907831,1.01237633694913,0,4.41647031501533,3.42786084014347,2.97072756258621,2.55129870453209,0.992909512008853,0.522399578277871,1.27993938234725,0.22940928106717,0,0,1.72376986148711,0,0.252030129759931,0.665191531965914,0.635030673459631,1.23012957516914,0,0,0,0,0.837063261473815,1.5626706890476,1.0470474879476,0.588231488031014,0.683045484958446,0.485510353031154,0.125896817975577,0.405507724878058,0.183546752161682,0,6.5407546914134,2.19686182734472,0.388859798148567,0.279972843250725,0,3.35565212115473,2.17608642603403,0.672187598284928,0,0,0,47.7466847628651,38.6163414868584,42.466704034914,0.338844532069132,0.889294796111139,5.84934816232909,6.92206453796882,6.3943210345149,8.68840320503374,12.6792040756113,29.6552291202246,31.0513658162889,32.8106939708156,29.4220513935918,22.0868540951614,29.0303194139441,29.3287141315803,33.0918763179608,15.4162233399144,17.8762273319263,15.2070467923681,52.0950836534266,40.7120014030723,44.2776364973246,9.77140496504833,11.8180148106653,15.1270265299042,33.2930301585245,27.4777343942269,40.6350791899155,1.59025005999687,2.64500460373749,3.18850937571846,0.860423876981386,0,0,0,0,0.983110940922263,0,0,0,3.66192891419369,0,0,0,0.865964164044856,1.01343946190039,0,0.68510327831436,7.50919862576798,3.11728492036132,5.55153045651635,5.1759131313064,3.45923245884088,3.61734337326294,4.70354828542819,1.75933227861546,1.23597483867187,0.86759614151947,0.884610551949874,0.970601099684455,1.32504911076236,0.969750506270444,3.72783522436244,5.85561594023094,4.1889341362691,0.766371165625774,2.51611761462433,0.599902730993408,1.01656181658452,21.12048015608,10.0650132620098,21.4868942112998,13.7321212951898,13.2972037811772,14.3373750746096,13.4660248346239,1.52759045775474,0.746441823660558,1.76905930903572,3.57751155007006,5.07469727554544,3.44853156650209,6.30217454318722,5.42537344208574,13.2671173345089,8.71173297936978,9.46387418053261,5.95017752699736,5.38919982332106,1.70195472151037,1.58356011747554,0.876782929710299,1.11218899690239,0.696504333044333,1.4404749548556,1.79130840136644,0,1.02939162845886,1.13665399758237,2.2783834978905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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=328365 | |||
|HGNC= | |||
|MCL_coexpression_id=22 | |||
|TSSclassifier=NA | |||
|UniProt=E0CX95 | |||
|association_with_transcript=52bp_to_ENSMUST00000160229_5end | |||
|cluster_id=chr14:26427376..26427419,+ | |||
|description=CAGE_peak_4_at_Zmiz1_5end | |||
|id=chr14:26427376..26427419,+ | |||
|ontology_enrichment_celltype=CL:0000540!2.45e-20!33;CL:0000047!2.45e-20!33;CL:0000031!2.45e-20!33;CL:0000404!2.45e-20!33;CL:0000117!2.25e-15!23;CL:0000337!2.25e-15!23;CL:0000221!3.02e-15!44;CL:0000133!3.02e-15!44;CL:0002319!3.14e-15!43;CL:0000393!8.24e-13!39;CL:0000211!8.24e-13!39;CL:0000055!2.04e-09!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,8.36e-21,33;CL:0000047,8.36e-21,33;CL:0000031,8.36e-21,33;CL:0000404,8.36e-21,33;CL:0000221,5.63e-16,44;CL:0000133,5.63e-16,44;CL:0002319,5.80e-16,43;CL:0000117,1.02e-15,23;CL:0000337,1.02e-15,23;CL:0000393,9.19e-14,39;CL:0000211,9.19e-14,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!9.60e-31!73;UBERON:0005743!9.60e-31!73;UBERON:0000073!3.98e-30!75;UBERON:0001016!3.98e-30!75;UBERON:0004121!1.42e-29!102;UBERON:0000924!1.42e-29!102;UBERON:0006601!1.42e-29!102;UBERON:0002346!3.71e-26!71;UBERON:0003075!3.71e-26!71;UBERON:0007284!3.71e-26!71;UBERON:0001049!6.60e-22!52;UBERON:0005068!6.60e-22!52;UBERON:0006241!6.60e-22!52;UBERON:0007135!6.60e-22!52;UBERON:0000033!1.02e-20!63;UBERON:0000955!4.50e-20!50;UBERON:0006238!4.50e-20!50;UBERON:0002616!1.09e-19!49;UBERON:0003056!1.38e-19!49;UBERON:0003080!1.23e-17!40;UBERON:0002780!4.86e-17!39;UBERON:0001890!4.86e-17!39;UBERON:0006240!4.86e-17!39;UBERON:0002020!1.62e-16!34;UBERON:0002791!2.79e-13!29;UBERON:0003528!2.79e-13!29;UBERON:0001893!2.79e-13!29;UBERON:0007811!9.87e-11!86;UBERON:0000153!9.25e-10!94;UBERON:0000956!4.70e-09!21;UBERON:0001869!4.70e-09!21;UBERON:0000203!4.70e-09!21;UBERON:0002619!8.51e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.23e-32,73;UBERON:0001016,2.73e-31,75;UBERON:0004121,8.62e-30,95;UBERON:0000924,8.62e-30,95;UBERON:0006601,8.62e-30,95;UBERON:0002346,8.72e-27,64;UBERON:0003075,8.72e-27,64;UBERON:0007284,8.72e-27,64;UBERON:0010371,3.69e-25,73;UBERON:0000073,7.36e-24,54;UBERON:0001049,1.28e-22,52;UBERON:0005068,1.28e-22,52;UBERON:0006241,1.28e-22,52;UBERON:0007135,1.28e-22,52;UBERON:0010314,1.45e-21,92;UBERON:0003056,4.97e-20,49;UBERON:0000955,6.13e-19,47;UBERON:0006238,6.13e-19,47;UBERON:0002616,1.49e-18,46;UBERON:0003080,4.97e-18,40;UBERON:0002780,2.03e-17,39;UBERON:0001890,2.03e-17,39;UBERON:0006240,2.03e-17,39;UBERON:0002020,6.96e-17,34;UBERON:0003528,1.45e-13,29;UBERON:0002791,1.45e-13,29;UBERON:0001893,1.45e-13,29;UBERON:0000956,3.10e-09,21;UBERON:0001869,3.10e-09,21;UBERON:0000203,3.10e-09,21;UBERON:0002619,6.36e-07,17 | |||
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| |||
|short_description=p4@Zmiz1 | |||
}} |
Latest revision as of 19:49, 25 September 2015
Short description: | p4@Zmiz1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Zmiz1_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | 52bp_to_ENSMUST00000160229_5end |
EntrezGene: | Zmiz1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 8.36e-21 | 33 |
neuronal stem cell | 8.36e-21 | 33 |
neuroblast | 8.36e-21 | 33 |
electrically signaling cell | 8.36e-21 | 33 |
ectodermal cell | 5.63e-16 | 44 |
neurectodermal cell | 5.63e-16 | 44 |
neural cell | 5.80e-16 | 43 |
CNS neuron (sensu Vertebrata) | 1.02e-15 | 23 |
neuroblast (sensu Vertebrata) | 1.02e-15 | 23 |
electrically responsive cell | 9.19e-14 | 39 |
electrically active cell | 9.19e-14 | 39 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 6.23e-32 | 73 |
nervous system | 2.73e-31 | 75 |
ectoderm-derived structure | 8.62e-30 | 95 |
ectoderm | 8.62e-30 | 95 |
presumptive ectoderm | 8.62e-30 | 95 |
neurectoderm | 8.72e-27 | 64 |
neural plate | 8.72e-27 | 64 |
presumptive neural plate | 8.72e-27 | 64 |
ecto-epithelium | 3.69e-25 | 73 |
regional part of nervous system | 7.36e-24 | 54 |
neural tube | 1.28e-22 | 52 |
neural rod | 1.28e-22 | 52 |
future spinal cord | 1.28e-22 | 52 |
neural keel | 1.28e-22 | 52 |
structure with developmental contribution from neural crest | 1.45e-21 | 92 |
pre-chordal neural plate | 4.97e-20 | 49 |
brain | 6.13e-19 | 47 |
future brain | 6.13e-19 | 47 |
regional part of brain | 1.49e-18 | 46 |
anterior neural tube | 4.97e-18 | 40 |
regional part of forebrain | 2.03e-17 | 39 |
forebrain | 2.03e-17 | 39 |
future forebrain | 2.03e-17 | 39 |
gray matter | 6.96e-17 | 34 |
brain grey matter | 1.45e-13 | 29 |
regional part of telencephalon | 1.45e-13 | 29 |
telencephalon | 1.45e-13 | 29 |
cerebral cortex | 3.10e-09 | 21 |
cerebral hemisphere | 3.10e-09 | 21 |
pallium | 3.10e-09 | 21 |
regional part of cerebral cortex | 6.36e-07 | 17 |