FFCP PHASE1:Hg19::chr4:103422471..103422495,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4790 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7794 | |||
|TSSclassifier=strong | |||
|UniProt=P19838 | |||
|association_with_transcript=0bp_to_ENST00000226574,ENST00000394820,NM_001165412,NM_003998,uc011cep.1,uc011ceq.1_5end | |||
|cluster_id=chr4:103422471..103422495,+ | |||
|description=CAGE_peak_2_at_NFKB1_5end | |||
|id=chr4:103422471..103422495,+ | |||
|ontology_enrichment_celltype=CL:0000738!2.04e-18!140;CL:0002031!5.24e-13!124;CL:0000037!1.05e-12!172;CL:0000566!1.05e-12!172;CL:0000988!2.04e-12!182;CL:0002087!5.14e-12!119;CL:0002032!2.43e-11!165;CL:0000837!2.43e-11!165;CL:0002057!9.51e-10!42;CL:0000860!1.02e-09!45;CL:0000766!1.69e-09!76;CL:0000557!5.10e-09!71;CL:0002009!3.08e-07!65;CL:0000839!6.08e-07!70 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.68e-12;33!CL:0002057;4.68e-12;33!CL:0000473;1.39e-08;39!CL:0000234;1.39e-08;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.10e-18,136;CL:0000037,6.29e-13,168;CL:0002031,8.65e-13,120;CL:0000988,1.44e-12,177;CL:0002087,7.28e-12,115;CL:0002032,1.60e-11,161;CL:0000837,1.60e-11,161;CL:0000860,7.60e-10,42;CL:0002057,7.60e-10,42;CL:0000766,3.20e-09,72;CL:0000557,9.89e-09,67;CL:0000473,1.27e-08,48;CL:0000234,1.27e-08,48;CL:0002009,6.46e-07,61 | |||
|ontology_enrichment_development_v019=CL:0002057;6.60e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002405,7.34e-07,93 | |||
|phase1_expression=1.81678379270557,0.428201047781966,0.704772020479856,0,0.446961094427288,0.872338524100369,5.06599756336621,0.631719873426831,2.35067065379855,1.22866968250754,0,1.09220686065086,1.05506791291381,2.72285976512103,1.65698687863958,3.36162573225888,3.61616716814386,2.19093027116212,3.41552959153355,0.861847406537515,0.612002073732759,1.56727360739044,0.85870796139317,0.821246550437305,2.25976751270645,6.49513948857586,7.63535481884495,6.92654875560377,2.36018566109342,4.60595277716655,5.10893206943051,0,0.90361775633475,0.369754010166788,1.16200800870452,2.98555388223585,1.46800219667424,7.75593571944628,12.0326668482085,11.718587018656,1.79132379391939,1.6194683300949,2.06060454107349,1.01778767145695,3.77875943688809,3.88134497900506,4.88100977501938,8.63452564845834,8.6717783850629,8.05538698502021,6.40401766322752,5.43909128743746,6.20542225325913,9.03678557017357,6.77132432971709,3.01187743268168,7.36846605156184,8.09004544002305,7.34601341690166,12.5162320559677,12.1474053901818,1.31940520074686,4.3882004676759,1.70489900213078,8.12585868160035,19.8584828641899,21.1759564658495,2.00998932205395,7.82224377630302,3.25783267057675,10.2917915447673,15.4676607114777,16.1395817594851,1.05627643155971,0.850417199860174,1.67726916406701,2.02191536063691,0.750884464207532,0.48217676009124,1.14005097496499,0.39783335439818,0.365328307529268,0,1.09227722252426,0.889509253863555,2.13365111283254,0.800791974072025,4.02326707968138,1.98313461835459,2.86216126360609,6.26134266020393,5.87237189370939,4.58727873750275,1.32171328579026,10.6496626966492,3.423993102076,11.2124568964885,9.82526906872912,2.87842098599313,2.00623794468814,4.56291173287027,0.946895611469467,0,2.33961959458865,2.65145316727353,0,0.270803863765016,1.0247305578054,1.04047478047903,1.31550323682941,0.276350017785848,2.60822777161547,5.04174314751005,1.33770414044857,0,1.69964014046349,4.98186641682498,1.03088233644789,1.01207876807801,4.14135038621326,3.90650072313851,3.8018081777935,1.20460095262218,0,0,3.78843603270427,2.46338399076314,6.45141578319144,4.81392352410313,7.24122019413995,0,0.670700859703636,3.19656404608826,0.722878304769133,1.50401373190767,1.44846518960824,2.3858578411533,3.89307896242109,1.89069634328136,1.33037638477538,2.19586964232815,1.76821751921912,2.91436230634034,0.370784442784429,0.97364218096405,1.39303789839414,1.59549552622638,5.72377498332821,2.85997455390064,4.45749001595478,1.98762407366705,0,2.77712401286075,3.95715559346807,0.838998872419812,1.10047216776027,1.46296476575767,2.06733407335463,2.13459757612026,2.00832367658802,0.402829317109147,0.760272105718513,1.95249646038536,0,0,0.535798369704479,0.898117490504679,1.23872628531654,0,0.949265659568129,1.46561395144326,1.31780417436063,15.511210565933,0.436094052142534,2.48485975847659,1.64619665163954,3.31022952033047,1.14734648299525,0.354668382198357,2.24271040056923,1.06748995729705,1.2333377420858,3.11211035399766,1.88594940897563,0.653847612453835,0.908144565869588,1.72852777344,3.28050004567315,0.624320153660641,0.570471821544449,2.39117888882882,0.23486899728753,0.971237666208789,0.842704840213491,1.83738754129404,0.491337269247072,1.96318984233954,7.12801714369232,2.22540236350701,0,1.43723628363248,1.0100166837244,1.25118519871964,2.77064115484183,1.31693286264251,0.919463387397059,1.65261864797256,1.81491493056034,1.79389635688862,3.20336083227851,1.48352330811693,0.900273288253207,1.23663035086127,0.772921620136887,1.67505170698431,2.53164498361899,0.779496041289589,1.26216887122057,2.57739716198438,1.93975268182574,2.13005755509969,0.705264687593482,1.18692414617341,1.15956511897978,3.00020732649918,0.286804595389004,0.243947412259191,0.132529768321485,0.116193942869518,0.829288440122964,0.252320850875628,0,3.12899064659632,1.92972281457866,2.76269842704961,0.928735856063958,0.721879481669586,0.828147600278907,1.18009283054671,0.482022059766964,0.330881918197182,0.217879444092406,0.71181185733329,1.21348177344148,0.784885860501384,0,0,1.40241773803446,0.8231480226628,0,1.26755034821831,1.96565443335525,1.77236972004421,2.20731549707325,0.122988438543114,1.71567810298526,1.53650399572076,2.24803506515239,2.91534019993729,3.61094936118265,0.651616610620649,0,2.88662684050547,1.97081688457631,0.821860859650752,3.3204282985047,1.85194205030644,0.951270761172991,1.58040879591855,0.858486162094873,1.23108503043699,2.10603838625314,1.93220510975347,2.81201501960331,1.6798212819886,1.27597587518148,2.86587272649115,4.94077695473735,1.91691339582606,1.47798971368783,2.90559832243646,33.5871547176051,19.4561937112898,34.7166691922545,2.41291998310242,0.763976851116555,1.17217447210047,3.4214489204541,1.23392991243988,1.20137223137567,3.42991719156694,0.448524337381443,0.43596006883328,1.3200891447771,2.58543431515556,3.57656445851882,5.071816515336,2.92531928243358,1.04007436911366,0.514414748524284,0,0.799266537048298,1.14382394926518,1.08524321078289,0.823240336780769,1.95441710576241,0.355391948742546,0.791951872933429,0.602878754119172,2.61460037580088,2.69927076191554,4.86495122564762,0.502257091432126,0,1.67737398844108,3.44585807502342,1.42636905040718,2.89562613335158,1.84928690295345,1.79060963239896,1.68127715990291,6.30498432646167,7.11570997036407,5.13372145118993,0.76228387266739,3.90419561572865,0.773288812777695,1.67516265334349,1.91381625495949,2.24702107184155,2.99161459204025,14.5045429702612,4.04881922673162,0,1.62759014219841,2.07970861530807,3.92543775353756,2.20783381047509,3.27995961979597,2.10662269809403,0,0,1.32845119707087,2.21243002250044,3.99664626553181,2.15381273209015,0.343143423810856,3.3082884179662,4.74571241800957,4.26910231213777,0.303127571446259,0,0.30239029332968,1.24053903909388,1.99500565274481,1.12264037773229,0.384417447767103,2.04682899626681,1.28683136914886,0,2.15893571323718,3.72879623157567,3.36721339656617,0.519254429183621,1.39452454151951,1.20859449591622,1.40354529212299,1.01289087829486,1.95184561879831,1.63882051206045,3.67148361886388,1.80479845162965,1.23224539367064,0,0,2.95544560900052,1.13733384070897,1.70093705276516,1.94324324491925,1.54227252690289,1.08378575017541,5.51858751240339,1.01950509218015,0,2.68649705666614,0.657779629937804,0.522870902049801,0.512900250232778,0.984043937099117,0,2.67906630284078,0.457847324091717,0.907604499126468,2.87132768998086,1.95018073810956,0,2.41676795730305,1.3864375540318,1.5350367472613,1.65403886981437,1.18162269355101,2.75531718437034,2.81247870473133,1.51354460599453,1.15699440752685,2.69066094311149,8.0396008871588,3.0347334256665,0.929691098594572,1.88887408098384,5.5762981612848,2.46426864140871,1.06461206063404,1.73986598415015,1.48259375283136,0.715624433709956,1.116475108079,1.89827654831236,2.66882271493355,1.02359116524534,4.2793898803392,3.5002357271853,1.56989728039846,0.899362287916574,1.92175920815238,1.29593642580255,2.02182481573316,3.17020642346017,0,3.41343617362713,2.19342140668156,0,0.545999645631943,2.12108147930569,1.13008116620243,3.30819206127675,0,0.876901770507525,1.15755106853338,2.62357900818653,1.62328301570163,2.16876448669825,0.845086807596724,2.72481569187698,2.25972794330179,1.426684205925,0.709522128141196,2.11107635297664,2.96365403663912,2.27683904259429,2.44954304171488,5.29221619990316,1.34060455107157,0,2.54188262097304,2.15252686335615,0,3.10401107475673,3.21612760289743,0,0,2.27858874869665,0.952927101831156,0,2.59389324477087,0.540031437238115,2.37937552888281,1.38871292465715,0,0.980160863924127,0.371606350251437,0.577076851905779,1.42283686696828,2.39139409093234,0.399158742865633,0.766021480529467,0.211673582723883,1.62310970137278,1.12318871245384,2.73881614839831,0,5.01268954180134,1.52362600021443,2.40882112655549,0.605399121573143,0,0.343505344755765,0.307240764308458,1.11838053946208,0.834245708559542,0.586164286206121,4.73290495621912,0,0.811367035427949,2.33150377598474,4.22961015263549,3.7428108081644,3.36968812325356,2.30584991324076,0.780103689942349,0.568272293612826,5.01363417949149,2.96964680832639,1.22864280839693,0,2.11004124615769,1.78093928036649,1.6480387422676,0.422250816255987,2.78947183551498,2.76283915531148,0.503865495708552,0.818149460017238,3.32328974744888,2.79935628895627,3.6846023970404,2.32727527078292,0,3.84709281984041,0,0,0.969332746095218,1.48428957058962,0,1.82299432759663,2.97363999987065,2.89999830173917,0.910347586283997,2.2882828526349,1.18193840883968,0,0.583209226766509,0.520874984799877,1.77148277162768,1.32656082487949,1.52581736317083,2.32216445855572,2.06883333267483,0.658156191461918,0.653630781113941,2.23077990845765,3.77056266668606,0.227884111694002,2.07507513949254,1.07709173291727,1.62971057883012,5.42301971544263,2.47313502185028,0.533034776018635,1.02193298195737,1.09886179476517,3.8228686837036,0.225595660617181,0.392125068635479,0.671286347903371,1.13852239634511,3.49660473756833,3.79796516150449,2.44849212238722,0.424059214301822,1.51472047819464,2.98578579323551,4.86516604768365,1.83309043480088,1.77912677208373,1.60633120630454,0.939797545549098,3.57226004797588,0,0.937057782901357,1.45963831372533,2.54364004611717,0.728341138602278,1.18375320854817,1.20990716048664,0.91821828489147,2.52746318513952,4.50970258243478,1.03688191397247,1.32930774541437,0.661983911750998,0.627865836814451,1.19472429772959,0.569219092059585,0.554698692052555,2.08271686002157,5.6835590500339,2.26353937109047,3.14508002835654,1.20390222730132,2.41890828222713,1.90032224424082,1.97077096927702,4.07353869251362,3.17722056089401,0.90392296312213,0.822251547880505,0.794858446811959,1.2029051231617,0.977756913674015,2.64524106830061,4.4825128895264,0.599428828746391,2.59362750877391,1.03082936549324,2.57392496792947,1.4405479798815,4.72159635148644,1.64985824231757,0.951329442515298,0.627617077873999,0.407992870545287,2.02265412931063,0.600420288709789,3.01191833562385,11.4971929260275,2.57859264851974,2.89176089707246,1.67569440763353,0.687481272035051,6.46085722119133,2.1964690054889,0.858452096273142,3.12440040418622,2.41860500952215,2.52209918479682,1.16495949527454,4.25429184459008,3.54388191039016,3.50498428041761,2.55911451938347,4.40301326742079,0,3.26888174667781,0.482259445395058,0.275078873194468,0.415440338029185,35.3209009735856,21.6664547276226,0.971992906528395,3.01891218839339,2.67939404817274,1.94081976099493,1.16160370171347,0.537862017998534,0.575745591958336,2.85878130549347,1.98627591109629,0.76280561296425,0.542999601753713,0.864221491201268,1.95952416065645,1.19730191562487,2.38068310173083,1.5334921960688,0.339936274560377,2.63794020620548,0,1.55139547633861,2.6446520348538,2.39521573038061,0,3.9511342650047,1.25763444079733,4.14239055347196,4.46549419630756,0.395223263795889,4.74991133685494,11.4901426398633,11.424373870759,5.5151776684994,7.04594826555962,2.62298104567844,1.88464915500281,1.77213635993397,1.83039397352945,2.253436752717,1.72022758707021,2.77322628842131,2.98062734118641,1.798532254171,0.499921631848426,1.81978941049977,2.28372266835974,1.41159491818903,0,0.28984205722165,0.74627401443437,2.10341978862502,0,1.51522404220071,0.50313580350515,0.889811221596536,1.14420034198462,2.57092570397506,0.621748802331122,1.62640664988597,1.91156120596443,3.14862178514523,3.88157392190648,0.829412415681711,1.32920857278997,3.1304703708704,3.15540978894159,2.66563648518157,0.813741466409323,2.00033525122815,3.86678005352958,3.71227007902795,2.3885753321917,0.400027764663154,4.12074846219351,2.02049693259551,2.52369796457302,2.50405779529494,4.07439023612359,2.60994291965212,0,0.694567422971502,3.67105056759701,1.25362188757041,0.617602894321944,0.877136198314828,0.176689145945881,0.771656153083659,1.8583668471838,0.512483037175893,2.41801239211839,1.21543982470953,2.07387654227596,14.029942236436,9.69913334287551,7.0333119530013,0,2.70350199629091,1.90180911022764,2.99981093782395,1.60037594541211,0.516644938982447,0.567515953566836,1.28874165176289,1.39879507719444,1.86623178009892,1.02315497042921,1.83302179374359,0.314531883711793,0.327628914576042,0.169732529954025,0.637724760305049,0.867550349813015,1.67593475391973,2.22603045457393,0.867479195013787,0.80057074828547,1.41070377476274,2.7562092961788,2.24802287837608,0,3.35231104020018,0,0.756215088665154,1.59061680667701,1.61475645631851,2.85538840518309,0.981477185010256,1.76954585021611,2.93485757634686,1.15525666150338,1.1441462864015,6.21323933454091,0.795664888465099,4.81346101435246,1.81534561833168,3.90757005616546,1.57144016688853,0.982631505060581,2.51355346568977,1.35075169236789,3.12431239445539,1.44680757550829,2.21955335678674,0,1.09651553371436,1.98484471355718,0.703484977438482,1.40538670403555,1.60710550763486,0.672567444437648,1.82089681270989,2.04895972216168,0.975726071789027,3.11131766400604,2.05785611324902,1.76721305739762,1.05236437700559,3.07303986298317,2.22462803784138,3.29670989972159,1.41404030924402,2.5224494698241,3.65263488203798,1.72742072974897,6.21077194253165,1.6439605160631,0.316027223465453,2.09234565662625,1.21700790611806,0.801711364730253,0.828864656652147,1.53646629384555,1.38251932362818,0.430227358820278,1.18332000730565,2.72682895229305,2.54032230114557,2.7492824225286,1.5510319283216,0,0.782988022584546,1.07965256976767,1.34109717480496,1.29485767437579,2.46390736454993,2.3196288626764,2.4285549652957,2.10545517115895,0,0.951360726220549,0.22589216407792,0,0.150962843566674,3.55001127296545,3.93407208907123,0.940634592723046,3.18692818280077,1.64973582971138,1.57046773691956,1.48523200163543,2.113278637917,1.86919826156599,1.50374268767766,2.8361470708374,2.89829352182294,2.85686301769052,0.352894871715692,0.240724100067505,1.46067277649303,1.37618785021362,3.01013124618048,1.89325874631822,1.56380427439104,2.61810414204226,1.5870805215462,1.11598505450025,1.84870251452567,3.46101249699031,0.504665699340316,0.437062287854782,0.126698501011437,0.713921808193872,0,0,0,3.63737751447549,1.60778478093707,3.31667775783512,4.13731983447581,2.77204176471275,1.66645102024618,4.52122368852043,4.7176782864852,1.23345048838675,1.84576759006678,2.82964064541507,1.95945073107265,2.05339980651169,3.03084238565644,2.86888821570705,2.32862249582209,2.76771113277313,1.28072815053259,3.8614456457388,1.79650404213174,0,1.22241444182866,1.22068853494722,1.33151354837103,2.21401172950129,1.28227396921293 | |||
|short_description=p2@NFKB1 | |||
}} |
Latest revision as of 03:57, 20 September 2015
Short description: | p2@NFKB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NFKB1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000226574, ENST00000394820, NM_001165412, NM_003998, uc011cep.1, uc011ceq.1_5end |
EntrezGene: | NFKB1 |
HGNC: | 7794 |
UniProt: | P19838 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 2.10e-18 | 136 |
hematopoietic stem cell | 6.29e-13 | 168 |
hematopoietic lineage restricted progenitor cell | 8.65e-13 | 120 |
hematopoietic cell | 1.44e-12 | 177 |
nongranular leukocyte | 7.28e-12 | 115 |
hematopoietic oligopotent progenitor cell | 1.60e-11 | 161 |
hematopoietic multipotent progenitor cell | 1.60e-11 | 161 |
classical monocyte | 7.60e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.60e-10 | 42 |
myeloid leukocyte | 3.20e-09 | 72 |
granulocyte monocyte progenitor cell | 9.89e-09 | 67 |
defensive cell | 1.27e-08 | 48 |
phagocyte | 1.27e-08 | 48 |
macrophage dendritic cell progenitor | 6.46e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
immune system | 7.34e-07 | 93 |