FFCP PHASE1:Hg19::chr4:103422232..103422241,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4790 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7794 | |||
|TSSclassifier=strong | |||
|UniProt=P19838 | |||
|association_with_transcript=-244bp_to_ENST00000226574,NM_001165412,NM_003998,uc011cep.1,uc011ceq.1_5end | |||
|cluster_id=chr4:103422232..103422241,+ | |||
|description=CAGE_peak_6_at_NFKB1_5end | |||
|id=chr4:103422232..103422241,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000453;6.13e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000557,1.02e-10,67;CL:0000860,6.53e-09,42;CL:0002057,6.53e-09,42;CL:0000473,1.67e-08,48;CL:0000234,1.67e-08,48;CL:0000453,9.03e-08,5;CL:0002009,1.15e-07,61;CL:0000839,1.16e-07,66 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002405,1.47e-10,93;UBERON:0002371,9.18e-10,76;UBERON:0001474,1.30e-09,82;UBERON:0002193,5.75e-09,108;UBERON:0002390,8.27e-09,98;UBERON:0003061,8.27e-09,98;UBERON:0004765,3.21e-08,90;UBERON:0001434,8.10e-07,100 | |||
|phase1_expression=0.363356758541113,0,0.140954404095971,0,0,0,0,0,0,0.245733936501509,0,0,0,0.123766352960047,0.331397375727916,0,0.602694528023977,0,0,0.984968464614303,0.612002073732759,0.313454721478088,0.572471974262113,0.410623275218653,0.627713197974014,0.152826811495903,0.246301768349837,0,0.786728553697808,0,0.928896739896456,0,0.6024118375565,0,0,0,0.293600439334847,6.64794490238253,11.8321224007384,8.68043482863407,0.447830948479849,0,0.257575567634187,0,0.755751887377619,0,0.464858073811369,0.411167888021826,0.929119112685311,0.28769239232215,0.512321413058201,0.945928919554341,2.06847408441971,1.29096936716765,2.70852973188684,0.376484679085209,0.545812300115692,1.12361742222542,1.22433556948361,4.17207735198922,3.83602275479425,0,0,0,2.03146467040009,2.8369261234557,5.60540024096017,0,0,0.217188844705117,0.605399502633369,8.47038562771399,3.16462387440884,0.211255286311942,0,0,0.112328631146495,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,1.52909291250092,1.32171328579026,1.12101712596307,0.263384084775077,0.393419540227666,1.96505381374582,0,0.167186495390678,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0.113309342697566,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0.604820229674197,2.13952156626806,1.15859523106239,0,0,0.12786256184353,0.361439152384566,0.50133791063589,0.144846518960824,0,0.486634870302636,0.378139268656271,0.443458794925128,0.351339142772504,0.523916301990851,0,0.370784442784429,0,0.348259474598534,0.26591592103773,0.476981248610684,0,0.371457501329565,0,0,0.347140501607594,0,0.419499436209906,0,0.626984899610432,0.516833518338658,0,0,0.402829317109147,0,0.488124115096339,0.367663080345869,0,0.0892997282840798,0.44905874525234,0.337834441449967,0,0,0,0,0,0,0.496971951695318,0.379891534993739,0.132409180813219,0.286836620748814,0.354668382198357,0.560677600142307,0,0,0.311211035399766,0.404132016209064,0.490385709340376,0.302714855289863,0,0.70296429550139,0,0,0.149448680551801,0,0.323745888736263,0.280901613404497,0,0,0,2.37600571456411,0.247266929278557,0,0,0,0.375355559615893,0.554128230968366,0,0,0,0.113432183160021,0.358779271377724,1.06778694409284,0.423863802319124,0,0.206105058476878,0,1.11670113798954,0.168776332241266,0.194874010322397,0,0.368199594569197,0.969876340912871,0,0.302256294682921,0,0,0.272746120590835,0.286804595389004,0.365921118388786,0.132529768321485,0.464775771478074,0.518305275076852,1.00928340350251,0,0,0.643240938192885,1.38134921352481,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0.603173834469785,0.462942225792648,1.62904152655162,0,0,1.39116485970092,0.117408694235822,1.44366447761074,1.38895653772983,0.380508304469197,0,0,0,0,0,0,0.16798212819886,0,0.179117045405697,0.581267877027924,0,0,0,3.10992173311158,2.16179930125442,1.76739406796932,2.92090313743978,1.14596527667483,2.34434894420094,0,0.719792448923265,0.600686115687835,3.42991719156694,0.224262168690721,0,0.22001485746285,1.42198887333556,0,0,1.06375246633948,1.04007436911366,0,1.41849132023278,0,0,0,0,0.65147236858747,0.355391948742546,0,0,0,0.199945982364114,0,0,2.10833939483032,0.239624855491583,1.14861935834114,0,0.289562613335158,0.205476322550383,0.358121926479791,0,0.985153801009636,1.94064817373566,0.641715181398742,0,1.30139853857622,0,0.167516265334349,1.27587750330633,0,0,0.414415513436035,0.24538298343828,0,0,0.415941723061614,0.535286966391485,0.157702415033935,1.17141414992713,0,0,0,0,0.184369168541703,0.347534457872331,1.56640925970192,0.343143423810856,0.413536052245775,0.431428401637234,1.70764092485511,0.303127571446259,0,0.30239029332968,0,0,0.280660094433074,0.128139149255701,0,0,0,0.462629081407967,0.177561725313127,0.246381468041427,0,0.464841513839837,0.362578348774867,1.00253235151642,0.0920809889358963,0.574072240823034,0.546273504020151,0.131124414959424,0,0,0,0,0.422206515571503,0,0.170093705276516,0,0,0,1.00337954770971,0.509752546090077,0,0.895499018888713,0,0,0,0,0,0.412164046590889,0.0915694648183434,0.082509499920588,0.574265537996172,0,1.6068392984416,0.676695028044854,0.770243085573222,0.307007349452259,0.551346289938122,0,0.725083469571143,0.93749290157711,0.0890320356467374,0.495854746082934,0.384380134730212,0.765676274967505,0.4046311234222,0,0,0,0,0,0,0.18532421910392,0.143124886741991,0.372158369359667,0,0.571890581771475,0,0,0,0,0,0.54907405947211,0.471249609382746,0.202182481573316,0,0.421258456238981,0,0.243713489631284,0,0,0.989838023675989,0,0,0,1.31535265576129,0,0.655894752046633,0.202910376962704,0.30982349809975,0.281695602532241,0.286822704408103,0.0982490410131212,0.35667105148125,0,0.211107635297664,0.329294892959902,0.379473173765715,0.349934720244983,0.0962221127255121,0,0,0.847294206991012,0,0,0.886860307073351,1.37834040124176,0,0,0,0,0,0,0,0,0.427296284509893,0.962479855263359,0.245040215981032,0,0,0.142283686696828,0,0.199579371432817,0,0,0.324621940274555,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0.556812347790485,0,0.270455678475983,0.99921590399346,0,0.18714054040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| |||
|short_description=p6@NFKB1 | |||
}} |
Latest revision as of 03:51, 20 September 2015
Short description: | p6@NFKB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_NFKB1_5end |
Coexpression cluster: | NA |
Association with transcript: | -244bp_to_ENST00000226574, NM_001165412, NM_003998, uc011cep.1, uc011ceq.1_5end |
EntrezGene: | NFKB1 |
HGNC: | 7794 |
UniProt: | P19838 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 1.02e-10 | 67 |
classical monocyte | 6.53e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.53e-09 | 42 |
defensive cell | 1.67e-08 | 48 |
phagocyte | 1.67e-08 | 48 |
Langerhans cell | 9.03e-08 | 5 |
macrophage dendritic cell progenitor | 1.15e-07 | 61 |
myeloid lineage restricted progenitor cell | 1.16e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
immune system | 1.47e-10 | 93 |
bone marrow | 9.18e-10 | 76 |
bone element | 1.30e-09 | 82 |
hemolymphoid system | 5.75e-09 | 108 |
hematopoietic system | 8.27e-09 | 98 |
blood island | 8.27e-09 | 98 |
skeletal element | 3.21e-08 | 90 |
skeletal system | 8.10e-07 | 100 |