FFCP PHASE1:Mm9::chr14:119276115..119276118,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=87|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr14:119276115..119276118,-|id=chr14:119276115..119276118,-|ontology_enrichment_celltype=CL:0000393!3.63e-15!39;CL:0000211!3.63e-15!39;CL:0000117!8.76e-14!23;CL:0000337!8.76e-14!23;CL:0000540!1.28e-13!33;CL:0000047!1.28e-13!33;CL:0000031!1.28e-13!33;CL:0000404!1.28e-13!33;CL:0000055!2.10e-11!50;CL:0000221!5.58e-10!44;CL:0000133!5.58e-10!44;CL:0002319!6.36e-10!43|ontology_enrichment_celltype_v019_2=CL:0000117,2.28e-16,23;CL:0000337,2.28e-16,23;CL:0000393,2.53e-16,39;CL:0000211,2.53e-16,39;CL:0000540,1.99e-14,33;CL:0000047,1.99e-14,33;CL:0000031,1.99e-14,33;CL:0000404,1.99e-14,33;CL:0000221,1.62e-09,44;CL:0000133,1.62e-09,44;CL:0002319,1.96e-09,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!4.79e-22!73;UBERON:0005743!4.79e-22!73;UBERON:0000073!1.80e-20!75;UBERON:0001016!1.80e-20!75;UBERON:0002346!2.10e-18!71;UBERON:0003075!2.10e-18!71;UBERON:0007284!2.10e-18!71;UBERON:0001049!7.67e-18!52;UBERON:0005068!7.67e-18!52;UBERON:0006241!7.67e-18!52;UBERON:0007135!7.67e-18!52;UBERON:0004121!2.59e-17!102;UBERON:0000924!2.59e-17!102;UBERON:0006601!2.59e-17!102;UBERON:0000033!4.02e-17!63;UBERON:0007811!1.90e-16!86;UBERON:0000955!3.90e-16!50;UBERON:0006238!3.90e-16!50;UBERON:0000153!7.06e-16!94;UBERON:0002616!1.12e-15!49;UBERON:0003056!9.25e-15!49;UBERON:0003080!1.08e-13!40;UBERON:0002780!4.07e-13!39;UBERON:0001890!4.07e-13!39;UBERON:0006240!4.07e-13!39;UBERON:0002020!1.02e-12!34;UBERON:0002791!1.73e-09!29;UBERON:0003528!1.73e-09!29;UBERON:0001893!1.73e-09!29|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.87e-22,73;UBERON:0001016,9.27e-21,75;UBERON:0000073,6.09e-20,54;UBERON:0002346,6.34e-19,64;UBERON:0003075,6.34e-19,64;UBERON:0007284,6.34e-19,64;UBERON:0001049,1.92e-18,52;UBERON:0005068,1.92e-18,52;UBERON:0006241,1.92e-18,52;UBERON:0007135,1.92e-18,52;UBERON:0004121,1.86e-17,95;UBERON:0000924,1.86e-17,95;UBERON:0006601,1.86e-17,95;UBERON:0010371,1.31e-15,73;UBERON:0003056,2.14e-15,49;UBERON:0003080,9.75e-15,40;UBERON:0000955,2.07e-14,47;UBERON:0006238,2.07e-14,47;UBERON:0002780,4.66e-14,39;UBERON:0001890,4.66e-14,39;UBERON:0006240,4.66e-14,39;UBERON:0002616,6.76e-14,46;UBERON:0002020,6.80e-14,34;UBERON:0010314,1.95e-12,92;UBERON:0003528,4.25e-10,29;UBERON:0002791,4.25e-10,29;UBERON:0001893,4.25e-10,29;UBERON:0002420,5.52e-07,8;UBERON:0007245,5.52e-07,8;UBERON:0010009,5.52e-07,8;UBERON:0010011,5.52e-07,8;UBERON:0000454,5.52e-07,8|phase1_expression=4.16387002472464,0,0,0,0,0,0,0.258246646883153,0,0,0,0,1.36960583944965,1.39872643870396,0.333109761815663,0,0.699561878128147,0,0.274228867211478,0.42438965179803,1.53077922271926,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.39921408534059,3.4468156614635,4.03802854755699,0.782391344348039,0.65407546914134,0.439372365468944,0.972149495371417,1.81982348112971,0,0,0.725362142011344,2.01656279485478,1.28629718017973,1.71920063963254,1.03134418455488,3.64169629547276,19.0436752537932,6.97214543856797,0,1.77858959222228,0.449949858640699,0,0,0.599200221036809,1.15265491596466,1.65903379693564,2.29510095163874,2.10324961351382,14.8538511889978,15.6816664075646,1.46988959057945,2.68367318851062,8.27296907949019,6.60695285996332,5.36286819957788,4.76180253094355,4.48413378282659,7.13603620098795,7.29278718779464,8.93385596804419,11.2552522006336,7.18151764551008,25.6326869362091,26.1963892670349,9.87917062874093,0,0.151143120213571,0,0.860423876981386,0,0,0,0,0.561777680527007,2.38602451609281,4.41636207824877,4.24007489412408,1.26759077799012,1.28326477414318,2.54805239706646,0,0,0,0,0.22836775943812,0,0.29688427812965,1.21439728736295,2.43572382649713,0.461230994512117,1.50722640552623,1.29347577849275,0.251333182659351,0.247194967734374,0,0,0.485300549842228,0.441683036920787,0,0,0.585561594023094,1.04723353406728,0,0.11981512450592,0,0,4.6435098215495,3.20250421973039,3.01570445070875,1.73824320192276,2.55715457330331,7.06479351502504,3.89379031362618,0.916554274652847,0.373220911830279,0.252722758433675,0.420883711772948,3.90361328888111,1.14951052216736,0.900310649026746,3.16480117455002,1.15662048557257,2.562274405697,1.21812241927647,2.84573707812917,1.07783996466421,1.51284864134255,0.879755620819744,1.53437012699302,3.05851974148158,0,1.02891068203972,3.38358253591438,0,0,0,0.207125772535502,2.57978665979206,0.900310307305074,0.23674473558521,0.983821158737019,0.925602677324269,0.697601834251224,0,0.350296027101508,0.16455984991348,0.820837320395476,0.324275238183423,0.146199987425332,0,0,2.52347938276953,1.54356918568927,0,0.264450566663544,3.83918850963421,2.32236671860439,0.77320476793256,0.80673409849337,0.667134131534611,0.190225626112559,0,0.823494773620054,0,0.397912944082302,0.779856348476481,0,0.648414149624083,0,0.569003702859245,1.82797620175566,1.1270773567308,3.66572390121566,1.16371492300575,0.420814919341911,0.505892296994058,0.442830443938806,0.941992367048249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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=87 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr14:119276115..119276118,- | |||
|description=CAGE_peak_at_chr14:119276115..119276118,- | |||
|id=chr14:119276115..119276118,- | |||
|ontology_enrichment_celltype=CL:0000393!3.63e-15!39;CL:0000211!3.63e-15!39;CL:0000117!8.76e-14!23;CL:0000337!8.76e-14!23;CL:0000540!1.28e-13!33;CL:0000047!1.28e-13!33;CL:0000031!1.28e-13!33;CL:0000404!1.28e-13!33;CL:0000055!2.10e-11!50;CL:0000221!5.58e-10!44;CL:0000133!5.58e-10!44;CL:0002319!6.36e-10!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.28e-16,23;CL:0000337,2.28e-16,23;CL:0000393,2.53e-16,39;CL:0000211,2.53e-16,39;CL:0000540,1.99e-14,33;CL:0000047,1.99e-14,33;CL:0000031,1.99e-14,33;CL:0000404,1.99e-14,33;CL:0000221,1.62e-09,44;CL:0000133,1.62e-09,44;CL:0002319,1.96e-09,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.79e-22!73;UBERON:0005743!4.79e-22!73;UBERON:0000073!1.80e-20!75;UBERON:0001016!1.80e-20!75;UBERON:0002346!2.10e-18!71;UBERON:0003075!2.10e-18!71;UBERON:0007284!2.10e-18!71;UBERON:0001049!7.67e-18!52;UBERON:0005068!7.67e-18!52;UBERON:0006241!7.67e-18!52;UBERON:0007135!7.67e-18!52;UBERON:0004121!2.59e-17!102;UBERON:0000924!2.59e-17!102;UBERON:0006601!2.59e-17!102;UBERON:0000033!4.02e-17!63;UBERON:0007811!1.90e-16!86;UBERON:0000955!3.90e-16!50;UBERON:0006238!3.90e-16!50;UBERON:0000153!7.06e-16!94;UBERON:0002616!1.12e-15!49;UBERON:0003056!9.25e-15!49;UBERON:0003080!1.08e-13!40;UBERON:0002780!4.07e-13!39;UBERON:0001890!4.07e-13!39;UBERON:0006240!4.07e-13!39;UBERON:0002020!1.02e-12!34;UBERON:0002791!1.73e-09!29;UBERON:0003528!1.73e-09!29;UBERON:0001893!1.73e-09!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.87e-22,73;UBERON:0001016,9.27e-21,75;UBERON:0000073,6.09e-20,54;UBERON:0002346,6.34e-19,64;UBERON:0003075,6.34e-19,64;UBERON:0007284,6.34e-19,64;UBERON:0001049,1.92e-18,52;UBERON:0005068,1.92e-18,52;UBERON:0006241,1.92e-18,52;UBERON:0007135,1.92e-18,52;UBERON:0004121,1.86e-17,95;UBERON:0000924,1.86e-17,95;UBERON:0006601,1.86e-17,95;UBERON:0010371,1.31e-15,73;UBERON:0003056,2.14e-15,49;UBERON:0003080,9.75e-15,40;UBERON:0000955,2.07e-14,47;UBERON:0006238,2.07e-14,47;UBERON:0002780,4.66e-14,39;UBERON:0001890,4.66e-14,39;UBERON:0006240,4.66e-14,39;UBERON:0002616,6.76e-14,46;UBERON:0002020,6.80e-14,34;UBERON:0010314,1.95e-12,92;UBERON:0003528,4.25e-10,29;UBERON:0002791,4.25e-10,29;UBERON:0001893,4.25e-10,29;UBERON:0002420,5.52e-07,8;UBERON:0007245,5.52e-07,8;UBERON:0010009,5.52e-07,8;UBERON:0010011,5.52e-07,8;UBERON:0000454,5.52e-07,8 | |||
|phase1_expression=4.16387002472464,0,0,0,0,0,0,0.258246646883153,0,0,0,0,1.36960583944965,1.39872643870396,0.333109761815663,0,0.699561878128147,0,0.274228867211478,0.42438965179803,1.53077922271926,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.39921408534059,3.4468156614635,4.03802854755699,0.782391344348039,0.65407546914134,0.439372365468944,0.972149495371417,1.81982348112971,0,0,0.725362142011344,2.01656279485478,1.28629718017973,1.71920063963254,1.03134418455488,3.64169629547276,19.0436752537932,6.97214543856797,0,1.77858959222228,0.449949858640699,0,0,0.599200221036809,1.15265491596466,1.65903379693564,2.29510095163874,2.10324961351382,14.8538511889978,15.6816664075646,1.46988959057945,2.68367318851062,8.27296907949019,6.60695285996332,5.36286819957788,4.76180253094355,4.48413378282659,7.13603620098795,7.29278718779464,8.93385596804419,11.2552522006336,7.18151764551008,25.6326869362091,26.1963892670349,9.87917062874093,0,0.151143120213571,0,0.860423876981386,0,0,0,0,0.561777680527007,2.38602451609281,4.41636207824877,4.24007489412408,1.26759077799012,1.28326477414318,2.54805239706646,0,0,0,0,0.22836775943812,0,0.29688427812965,1.21439728736295,2.43572382649713,0.461230994512117,1.50722640552623,1.29347577849275,0.251333182659351,0.247194967734374,0,0,0.485300549842228,0.441683036920787,0,0,0.585561594023094,1.04723353406728,0,0.11981512450592,0,0,4.6435098215495,3.20250421973039,3.01570445070875,1.73824320192276,2.55715457330331,7.06479351502504,3.89379031362618,0.916554274652847,0.373220911830279,0.252722758433675,0.420883711772948,3.90361328888111,1.14951052216736,0.900310649026746,3.16480117455002,1.15662048557257,2.562274405697,1.21812241927647,2.84573707812917,1.07783996466421,1.51284864134255,0.879755620819744,1.53437012699302,3.05851974148158,0,1.02891068203972,3.38358253591438,0,0,0,0.207125772535502,2.57978665979206,0.900310307305074,0.23674473558521,0.983821158737019,0.925602677324269,0.697601834251224,0,0.350296027101508,0.16455984991348,0.820837320395476,0.324275238183423,0.146199987425332,0,0,2.52347938276953,1.54356918568927,0,0.264450566663544,3.83918850963421,2.32236671860439,0.77320476793256,0.80673409849337,0.667134131534611,0.190225626112559,0,0.823494773620054,0,0.397912944082302,0.779856348476481,0,0.648414149624083,0,0.569003702859245,1.82797620175566,1.1270773567308,3.66572390121566,1.16371492300575,0.420814919341911,0.505892296994058,0.442830443938806,0.941992367048249,0.246794327843601,0,0.667380422864376,0.196558995113203,0.224862112384854,0,0,0,0,0.324270453550071,0.274561413188081,0,0.372140947668503,0.312037673114561,0,0,0,0.554259570499814,0.568474235311454,0.651859905768103,2.03694102930226,2.34690248288502,1.00503754465089,0.476087281772027,0.390267295715598,0.157635144106191,1.10732344824387,0.478364305972461,0.491589944147214,1.72684981865896,0.433947175744535,0,0,0,0,4.97706828962155,4.10240903072711,3.44263385291018,0.504941854408746,0.94652465824877,1.56175497718655,1.29254038639679,0.716906393857656,1.33679204449436,0.849229592366497,1.21443210502468,3.21481443702443,1.18586333383957,3.21321316421807,0.283880170416537,1.78065603667255,0.81443479676788,1.48473110675282,0,0.728341908464944,0.906970670894253,1.13163047853539,0.295301892880773,0,0.516856586336442,0.727067458955011,0.712994756769443,0.632073515871632,0,0,3.06395645178409,2.52085531643834,3.10460841078611,3.64372959553707,2.30542303734956,3.21063871683727,3.62007845324666,0.608929898229199,0.469343416127421,0.21183207086382,0.441056796109924,0.32977250588296,0.322928853391811,0.180938774784468,0.596861720015682,0.492422699235184,0,4.63563255026274,0,1.857481811669,0.185194527369712,0.565105371014073,0.136694227721025,0,0,0.279902904647316,0.276399947608848,1.90934123603023,1.10717597753397,0.406638934253697,2.26811215725783,1.04544148007234,2.18362563746178,0.539457385539283,0.247960367176008,0.26175594198403,0.388844919875379,1.24267862617385,5.6369293868419,1.19613236835183,1.65458490457098,1.55560950675238,1.29159823477731,2.36538575687089,1.76035857968631,0.2604087696879,0.524296722128554,3.62376181239009,3.16833006883652,1.26404448251271,1.82452693761148,1.43795340030758,0.909445760844565,0.537080087002444,0.596044064343795,1.44234539423963,1.62458479892035,1.41353029927407,1.5241361331,3.62974266492626,3.21611006441183,2.50150788264857,4.32444538071805,0,0,0.269141569828427,0.503653849092235,1.15913756419314,0.750729901804728,0.549454872801795,0.214368379079066,0,1.12950368523413,3.22227665555024,1.14579102687879,3.78077001156113,2.74033007908257,3.7769694869485,3.37511250115903,2.2516060161211,2.26571204492102,0.51776031175182,4.98179268404048,0.798049746802062,2.39027048055788,1.70174701947806,2.09613162627982,0.919217542250071,1.33348036680969,1.85431551515005,1.28367683836726,1.01078884705519,1.01391719956096,0.754505365544305,1.49826411951812,1.02440243847791,0.861532034334199,0.952587382566147,0.927074607558844,1.54327376370964,0.824171801606613,1.91358596174717,2.0572155143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| |||
|short_description=p@chr14:119276115..119276118,- | |||
}} |
Latest revision as of 23:36, 3 August 2015
Short description: | p@chr14:119276115..119276118, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:119276115..119276118, - |
Coexpression cluster: | MCL_coexpression_mm9:87 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.28e-16 | 23 |
neuroblast (sensu Vertebrata) | 2.28e-16 | 23 |
electrically responsive cell | 2.53e-16 | 39 |
electrically active cell | 2.53e-16 | 39 |
neuron | 1.99e-14 | 33 |
neuronal stem cell | 1.99e-14 | 33 |
neuroblast | 1.99e-14 | 33 |
electrically signaling cell | 1.99e-14 | 33 |
ectodermal cell | 1.62e-09 | 44 |
neurectodermal cell | 1.62e-09 | 44 |
neural cell | 1.96e-09 | 43 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 4.87e-22 | 73 |
nervous system | 9.27e-21 | 75 |
regional part of nervous system | 6.09e-20 | 54 |
neurectoderm | 6.34e-19 | 64 |
neural plate | 6.34e-19 | 64 |
presumptive neural plate | 6.34e-19 | 64 |
neural tube | 1.92e-18 | 52 |
neural rod | 1.92e-18 | 52 |
future spinal cord | 1.92e-18 | 52 |
neural keel | 1.92e-18 | 52 |
ectoderm-derived structure | 1.86e-17 | 95 |
ectoderm | 1.86e-17 | 95 |
presumptive ectoderm | 1.86e-17 | 95 |
ecto-epithelium | 1.31e-15 | 73 |
pre-chordal neural plate | 2.14e-15 | 49 |
anterior neural tube | 9.75e-15 | 40 |
brain | 2.07e-14 | 47 |
future brain | 2.07e-14 | 47 |
regional part of forebrain | 4.66e-14 | 39 |
forebrain | 4.66e-14 | 39 |
future forebrain | 4.66e-14 | 39 |
regional part of brain | 6.76e-14 | 46 |
gray matter | 6.80e-14 | 34 |
structure with developmental contribution from neural crest | 1.95e-12 | 92 |
brain grey matter | 4.25e-10 | 29 |
regional part of telencephalon | 4.25e-10 | 29 |
telencephalon | 4.25e-10 | 29 |
basal ganglion | 5.52e-07 | 8 |
nuclear complex of neuraxis | 5.52e-07 | 8 |
aggregate regional part of brain | 5.52e-07 | 8 |
collection of basal ganglia | 5.52e-07 | 8 |
cerebral subcortex | 5.52e-07 | 8 |