FFCP PHASE1:Hg19::chr9:98638233..98638306,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr9:98638233..98638306,-
|short_description=p1@LINC00476
|description=CAGE_peak_1_at_LINC00476_5end
|association_with_transcript=0bp_to_ENST00000321517,ENST000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=100128782 | |EntrezGene=100128782 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=27858 | |HGNC=27858 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000321517,ENST00000412446,NR_023389,NR_023390,uc004avp.3,uc004avr.2,uc004avs.2_5end | |||
|cluster_id=chr9:98638233..98638306,- | |||
|coexpression_cluster_id=C57 | |||
|description=CAGE_peak_1_at_LINC00476_5end | |||
|id=chr9:98638233..98638306,- | |||
|ontology_enrichment_celltype=CL:0000738!4.68e-31!140;CL:0000037!7.14e-28!172;CL:0000566!7.14e-28!172;CL:0000988!2.46e-27!182;CL:0002032!5.21e-25!165;CL:0000837!5.21e-25!165;CL:0002031!2.14e-24!124;CL:0002087!9.08e-24!119;CL:0000838!9.65e-16!52;CL:0000542!1.43e-15!53;CL:0000051!1.43e-15!53;CL:0000766!6.27e-13!76;CL:0000791!1.10e-11!18;CL:0000789!1.10e-11!18;CL:0002420!1.10e-11!18;CL:0002419!1.10e-11!18;CL:0000790!1.10e-11!18;CL:0000763!8.18e-11!112;CL:0000049!8.18e-11!112;CL:0000557!2.55e-10!71;CL:0000860!3.16e-10!45;CL:0000084!8.97e-10!25;CL:0000827!8.97e-10!25;CL:0002057!2.56e-09!42;CL:0000839!4.48e-09!70;CL:0002009!6.41e-09!65;CL:0002194!3.39e-08!63;CL:0000576!3.39e-08!63;CL:0000040!3.39e-08!63;CL:0000559!3.39e-08!63;CL:0000625!5.09e-08!11;CL:0000236!8.54e-08!14 | |||
|ontology_enrichment_celltype_v019=CL:0000791;4.61e-12;18!CL:0000789;4.61e-12;18!CL:0002419;4.61e-12;18!CL:0000084;5.10e-10;25!CL:0000542;5.43e-10;53!CL:0000625;3.25e-08;11!CL:0002087;3.67e-08;104!CL:0000236;6.99e-08;13!CL:0000738;4.40e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,3.67e-31,136;CL:0000037,5.67e-28,168;CL:0000988,3.26e-27,177;CL:0002032,4.47e-25,161;CL:0000837,4.47e-25,161;CL:0002031,2.01e-24,120;CL:0002087,8.47e-24,115;CL:0000838,1.38e-15,52;CL:0000542,2.02e-15,53;CL:0000051,2.02e-15,53;CL:0000766,4.27e-13,72;CL:0000791,8.34e-12,18;CL:0000789,8.34e-12,18;CL:0002420,8.34e-12,18;CL:0002419,8.34e-12,18;CL:0000790,8.34e-12,18;CL:0000763,6.54e-11,108;CL:0000049,6.54e-11,108;CL:0000557,2.07e-10,67;CL:0000084,7.18e-10,25;CL:0000827,7.18e-10,25;CL:0000860,1.52e-09,42;CL:0002057,1.52e-09,42;CL:0000839,4.00e-09,66;CL:0002009,5.56e-09,61;CL:0000473,2.82e-08,48;CL:0000234,2.82e-08,48;CL:0002194,3.09e-08,59;CL:0000576,3.09e-08,59;CL:0000040,3.09e-08,59;CL:0000559,3.09e-08,59;CL:0000625,4.27e-08,11;CL:0000236,7.21e-08,14 | |||
|ontology_enrichment_development_v019=CL:0000790;4.61e-12;18!CL:0000051;5.43e-10;53!CL:0002057;4.28e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.10e-17!102;UBERON:0003061!7.10e-17!102;UBERON:0002193!1.13e-15!112;UBERON:0007023!3.48e-13!115;UBERON:0002371!2.57e-11!80;UBERON:0001474!2.48e-10!86;UBERON:0004765!1.02e-08!101;UBERON:0001434!1.02e-08!101;UBERON:0002405!3.07e-08!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.64e-17,98;UBERON:0003061,4.64e-17,98;UBERON:0002193,5.99e-16,108;UBERON:0007023,4.03e-13,114;UBERON:0002405,5.26e-12,93;UBERON:0002371,2.08e-11,76;UBERON:0001474,2.53e-10,82;UBERON:0004765,3.65e-10,90;UBERON:0001434,4.97e-09,100 | |||
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| ||
|short_description=p1@LINC00476 | |||
}} | }} |
Latest revision as of 11:10, 18 September 2015
Short description: | p1@LINC00476 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LINC00476_5end |
Coexpression cluster: | C57_Neutrophils_Eosinophils_Whole_CD4_CD8_CD19_Natural |
Association with transcript: | 0bp_to_ENST00000321517, ENST00000412446, NR_023389, NR_023390, uc004avp.3, uc004avr.2, uc004avs.2_5end |
EntrezGene: | LINC00476 |
HGNC: | 27858 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.64e-17 | 98 |
blood island | 4.64e-17 | 98 |
hemolymphoid system | 5.99e-16 | 108 |
adult organism | 4.03e-13 | 114 |
immune system | 5.26e-12 | 93 |
bone marrow | 2.08e-11 | 76 |
bone element | 2.53e-10 | 82 |
skeletal element | 3.65e-10 | 90 |
skeletal system | 4.97e-09 | 100 |