FFCP PHASE1:Mm9::chr13:94074021..94074093,+: Difference between revisions
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{{FFCP|EntrezGene=26556|HGNC=|MCL_coexpression_id=413|UniProt=D3Z6A9|association_with_transcript=0bp_to_ENSMUST00000109493_5end|description=CAGE_peak_1_at_Homer1_5end|id=chr13:94074021..94074093,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!6.07e-12!34;UBERON:0002791!4.22e-10!29;UBERON:0003528!4.22e-10!29;UBERON:0001893!4.22e-10!29;UBERON:0000956!8.12e-09!21;UBERON:0001869!8.12e-09!21;UBERON:0000203!8.12e-09!21;UBERON:0000468!3.84e-08!333;UBERON:0001049!4.98e-08!52;UBERON:0005068!4.98e-08!52;UBERON:0006241!4.98e-08!52;UBERON:0007135!4.98e-08!52;UBERON:0002021!5.94e-08!10;UBERON:0000411!5.94e-08!10;UBERON:0001950!5.94e-08!10;UBERON:0000033!1.46e-07!63;UBERON:0000955!3.67e-07!50;UBERON:0006238!3.67e-07!50;UBERON:0002346!4.93e-07!71;UBERON:0003075!4.93e-07!71;UBERON:0007284!4.93e-07!71;UBERON:0002619!7.31e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0010314,1.82e-12,92;UBERON:0002020,6.07e-12,34;UBERON:0003528,4.22e-10,29;UBERON:0002791,4.22e-10,29;UBERON:0001893,4.22e-10,29;UBERON:0000956,8.12e-09,21;UBERON:0001869,8.12e-09,21;UBERON:0000203,8.12e-09,21;UBERON:0000073,2.82e-08,54;UBERON:0001049,4.98e-08,52;UBERON:0005068,4.98e-08,52;UBERON:0006241,4.98e-08,52;UBERON:0007135,4.98e-08,52;UBERON:0002021,5.94e-08,10;UBERON:0000411,5.94e-08,10;UBERON:0001950,5.94e-08,10;UBERON:0002346,1.95e-07,64;UBERON:0003075,1.95e-07,64;UBERON:0007284,1.95e-07,64;UBERON:0000922,2.80e-07,320;UBERON:0010371,2.88e-07,73;UBERON:0002619,7.31e-07,17;UBERON:0000955,9.28e-07,47;UBERON:0006238,9.28e-07,47|phase1_expression=18.0968197228417,10.8182376368202,11.3749809847384,32.9685990324445,41.0734498556005,20.3133919013387,15.8856595604957,6.84353614240354,20.4143647119917,24.8108397901313,18.320322600129,16.5128369120346,1.54080656938085,3.93391810885488,6.99530499812892,5.26435695213547,4.19737126876888,1.89277299214943,2.33094537129756,2.54633791078818,15.3928355173436,7.04965753526286,7.05239430675126,7.1996590257033,8.48814339948529,8.03924749761028,9.04600191934057,8.18790684206378,14.251756459228,12.3494763582366,8.64748991555688,7.62036808151557,9.84103660135312,0,8.08784535303569,7.14808975041517,11.637653306955,0.837063261473815,2.3440060335714,0.523523743973798,1.76469446409304,2.04913645487534,2.91306211818692,3.52511090331616,3.75094645512204,5.68994931701213,2.34717403304412,2.8343270329458,1.75748946187577,3.11087838518853,2.37976916763116,0,5.20126078778983,5.80289713609076,4.03312558970957,3.08711323243136,0.85960031981627,5.67239301505187,16.7922662513466,15.340738398889,15.2119536841483,3.72728985276045,1.77858959222228,3.1496490104849,1.97773272513395,2.1314403448383,4.19440154725767,1.53687322128622,21.9821978093973,21.4659441947388,19.1395714829758,15.4251531578054,16.3442720304194,19.4760370751777,11.9806838772795,17.4651569455904,12.1127469099328,14.1732945274558,15.5142598588806,13.9799464994005,12.1678565991205,18.2319679694866,9.49222196604695,10.1297269805702,16.6550090076723,24.4541725943144,18.7930618654816,20.1311401491325,14.4637029266382,9.52201657345497,3.47837386442013,7.74381489283248,8.83962733820076,7.55584468292944,9.09686984426737,6.72040330646003,16.431997155415,2.89731548382698,2.33807404142582,1.7666978725517,13.0984380392313,2.56652954828636,2.54805239706646,21.3320010945999,9.52560580449342,8.36087556067825,11.1215377903252,9.36307813696292,5.17875767294343,12.6175818205101,13.1848848342263,9.43842982767638,9.91646638201052,10.399862198131,6.11461277105665,9.42499434972566,4.6967043869531,9.10975948595443,8.84610551949874,16.1766849947409,13.0296495891632,7.75800405016355,7.45567044872489,22.2513405728776,19.0596503200244,11.240110429178,2.03685711660064,0,1.90605340609597,17.8250860891739,65.4225862030636,28.6491922817331,63.6197011903732,67.5088807352073,21.4021685896347,30.9880812459417,6.31404055871961,5.97153458928446,7.07623723614289,17.6771158944638,14.8337304977482,12.1848115349741,11.884100567153,10.0972227949929,9.0488543871266,10.249097622788,10.4945931506896,11.1242449417777,13.1496475689034,16.2631228944325,11.2608719464927,10.9597866213787,9.17555922444473,8.70630416305416,10.2891068203972,9.15557627365069,0.702213187313235,1.28673953557358,2.55747149456033,28.9976081549703,27.2050229578072,20.3470129450947,24.3847077652767,30.1049274573528,24.9912722877553,33.2523540993083,29.7783475553577,37.7152055845957,38.013325330014,23.9684497555479,32.1843173897047,30.8481973467451,22.1745616443961,25.9018388207517,40.3756701243124,26.5493899938554,15.8601015832223,15.073682299822,16.8497717922835,11.3795969211615,11.3403365963442,12.5043785266472,11.3412802360884,8.3699275489526,12.3377556001573,9.22314146454461,6.78605063760728,7.95825888164603,8.77338392036041,13.4822911298133,10.1584883441106,12.5459002150251,4.93136542478012,11.1963542357534,12.3978509240388,8.14605311381257,8.72786192254316,5.75113723100612,5.31186911843761,5.75679577120448,6.59394656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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=26556 | |||
|HGNC= | |||
|MCL_coexpression_id=413 | |||
|TSSclassifier=NA | |||
|UniProt=D3Z6A9 | |||
|association_with_transcript=0bp_to_ENSMUST00000109493_5end | |||
|cluster_id=chr13:94074021..94074093,+ | |||
|description=CAGE_peak_1_at_Homer1_5end | |||
|id=chr13:94074021..94074093,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!6.07e-12!34;UBERON:0002791!4.22e-10!29;UBERON:0003528!4.22e-10!29;UBERON:0001893!4.22e-10!29;UBERON:0000956!8.12e-09!21;UBERON:0001869!8.12e-09!21;UBERON:0000203!8.12e-09!21;UBERON:0000468!3.84e-08!333;UBERON:0001049!4.98e-08!52;UBERON:0005068!4.98e-08!52;UBERON:0006241!4.98e-08!52;UBERON:0007135!4.98e-08!52;UBERON:0002021!5.94e-08!10;UBERON:0000411!5.94e-08!10;UBERON:0001950!5.94e-08!10;UBERON:0000033!1.46e-07!63;UBERON:0000955!3.67e-07!50;UBERON:0006238!3.67e-07!50;UBERON:0002346!4.93e-07!71;UBERON:0003075!4.93e-07!71;UBERON:0007284!4.93e-07!71;UBERON:0002619!7.31e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,1.82e-12,92;UBERON:0002020,6.07e-12,34;UBERON:0003528,4.22e-10,29;UBERON:0002791,4.22e-10,29;UBERON:0001893,4.22e-10,29;UBERON:0000956,8.12e-09,21;UBERON:0001869,8.12e-09,21;UBERON:0000203,8.12e-09,21;UBERON:0000073,2.82e-08,54;UBERON:0001049,4.98e-08,52;UBERON:0005068,4.98e-08,52;UBERON:0006241,4.98e-08,52;UBERON:0007135,4.98e-08,52;UBERON:0002021,5.94e-08,10;UBERON:0000411,5.94e-08,10;UBERON:0001950,5.94e-08,10;UBERON:0002346,1.95e-07,64;UBERON:0003075,1.95e-07,64;UBERON:0007284,1.95e-07,64;UBERON:0000922,2.80e-07,320;UBERON:0010371,2.88e-07,73;UBERON:0002619,7.31e-07,17;UBERON:0000955,9.28e-07,47;UBERON:0006238,9.28e-07,47 | |||
|phase1_expression=18.0968197228417,10.8182376368202,11.3749809847384,32.9685990324445,41.0734498556005,20.3133919013387,15.8856595604957,6.84353614240354,20.4143647119917,24.8108397901313,18.320322600129,16.5128369120346,1.54080656938085,3.93391810885488,6.99530499812892,5.26435695213547,4.19737126876888,1.89277299214943,2.33094537129756,2.54633791078818,15.3928355173436,7.04965753526286,7.05239430675126,7.1996590257033,8.48814339948529,8.03924749761028,9.04600191934057,8.18790684206378,14.251756459228,12.3494763582366,8.64748991555688,7.62036808151557,9.84103660135312,0,8.08784535303569,7.14808975041517,11.637653306955,0.837063261473815,2.3440060335714,0.523523743973798,1.76469446409304,2.04913645487534,2.91306211818692,3.52511090331616,3.75094645512204,5.68994931701213,2.34717403304412,2.8343270329458,1.75748946187577,3.11087838518853,2.37976916763116,0,5.20126078778983,5.80289713609076,4.03312558970957,3.08711323243136,0.85960031981627,5.67239301505187,16.7922662513466,15.340738398889,15.2119536841483,3.72728985276045,1.77858959222228,3.1496490104849,1.97773272513395,2.1314403448383,4.19440154725767,1.53687322128622,21.9821978093973,21.4659441947388,19.1395714829758,15.4251531578054,16.3442720304194,19.4760370751777,11.9806838772795,17.4651569455904,12.1127469099328,14.1732945274558,15.5142598588806,13.9799464994005,12.1678565991205,18.2319679694866,9.49222196604695,10.1297269805702,16.6550090076723,24.4541725943144,18.7930618654816,20.1311401491325,14.4637029266382,9.52201657345497,3.47837386442013,7.74381489283248,8.83962733820076,7.55584468292944,9.09686984426737,6.72040330646003,16.431997155415,2.89731548382698,2.33807404142582,1.7666978725517,13.0984380392313,2.56652954828636,2.54805239706646,21.3320010945999,9.52560580449342,8.36087556067825,11.1215377903252,9.36307813696292,5.17875767294343,12.6175818205101,13.1848848342263,9.43842982767638,9.91646638201052,10.399862198131,6.11461277105665,9.42499434972566,4.6967043869531,9.10975948595443,8.84610551949874,16.1766849947409,13.0296495891632,7.75800405016355,7.45567044872489,22.2513405728776,19.0596503200244,11.240110429178,2.03685711660064,0,1.90605340609597,17.8250860891739,65.4225862030636,28.6491922817331,63.6197011903732,67.5088807352073,21.4021685896347,30.9880812459417,6.31404055871961,5.97153458928446,7.07623723614289,17.6771158944638,14.8337304977482,12.1848115349741,11.884100567153,10.0972227949929,9.0488543871266,10.249097622788,10.4945931506896,11.1242449417777,13.1496475689034,16.2631228944325,11.2608719464927,10.9597866213787,9.17555922444473,8.70630416305416,10.2891068203972,9.15557627365069,0.702213187313235,1.28673953557358,2.55747149456033,28.9976081549703,27.2050229578072,20.3470129450947,24.3847077652767,30.1049274573528,24.9912722877553,33.2523540993083,29.7783475553577,37.7152055845957,38.013325330014,23.9684497555479,32.1843173897047,30.8481973467451,22.1745616443961,25.9018388207517,40.3756701243124,26.5493899938554,15.8601015832223,15.073682299822,16.8497717922835,11.3795969211615,11.3403365963442,12.5043785266472,11.3412802360884,8.3699275489526,12.3377556001573,9.22314146454461,6.78605063760728,7.95825888164603,8.77338392036041,13.4822911298133,10.1584883441106,12.5459002150251,4.93136542478012,11.1963542357534,12.3978509240388,8.14605311381257,8.72786192254316,5.75113723100612,5.31186911843761,5.75679577120448,6.59394656933774,6.41665252393363,17.4907049981418,11.5123122944105,15.528160613943,13.0420025183215,12.9830477688642,14.9529839046498,10.1850340712568,10.3570609482292,5.0261920300261,9.88421087477093,8.62609239164127,8.93138274404408,11.8574315783533,12.3763650194085,14.5311904952749,10.6137574699941,4.80358294433172,12.127450353311,9.94086356296358,7.63852885988347,10.5610611729826,7.20276906999808,6.9032655856944,9.56154874503214,5.2019597555043,3.76489972402917,5.74037167166954,4.58817281204066,4.48980952851328,3.61622646453779,1.50791283939272,5.98296252200581,18.1952781017043,9.93372286697037,15.5734072288158,11.7211686592203,4.26230857979356,33.3261623909772,5.04813151066011,8.98009111882268,8.61693590931196,8.36390792833932,6.90675889655422,12.4553673547086,7.69140333182299,7.01414058987149,8.30104333687699,44.6636629826312,13.7681882652021,7.30068975035746,8.95878276444668,18.6416238958965,9.2921596837974,9.71122544619926,11.4882951646605,9.43025398779491,3.83892460745005,13.2197113615889,6.46070732920553,3.99887102425256,5.70395805415554,6.95280867458795,7.37930260024991,12.3762651897824,7.48967132658334,8.46287141947158,4.52755393239641,6.64444808597936,5.49754724291048,4.99432689285798,3.62007845324666,1.2178597964584,6.8054795338476,6.77862626764225,4.19003956304428,6.26567761177624,7.10443477461984,10.5547618624273,7.87857470420701,11.1615811826642,12.2421951384537,14.4631735568198,4.27177201994632,11.144890870014,8.70414278637645,4.89757988212197,6.83471138605126,5.94823250336959,0.849892149969277,2.79902904647316,3.59319931891502,5.72802370809068,13.6024477239888,12.1991680276109,8.6404272657441,7.9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| |||
|short_description=p1@Homer1 | |||
}} |
Latest revision as of 00:27, 2 October 2015
Short description: | p1@Homer1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Homer1_5end |
Coexpression cluster: | MCL_coexpression_mm9:413 |
Association with transcript: | 0bp_to_ENSMUST00000109493_5end |
EntrezGene: | Homer1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 1.82e-12 | 92 |
gray matter | 6.07e-12 | 34 |
brain grey matter | 4.22e-10 | 29 |
regional part of telencephalon | 4.22e-10 | 29 |
telencephalon | 4.22e-10 | 29 |
cerebral cortex | 8.12e-09 | 21 |
cerebral hemisphere | 8.12e-09 | 21 |
pallium | 8.12e-09 | 21 |
regional part of nervous system | 2.82e-08 | 54 |
neural tube | 4.98e-08 | 52 |
neural rod | 4.98e-08 | 52 |
future spinal cord | 4.98e-08 | 52 |
neural keel | 4.98e-08 | 52 |
occipital lobe | 5.94e-08 | 10 |
visual cortex | 5.94e-08 | 10 |
neocortex | 5.94e-08 | 10 |
neurectoderm | 1.95e-07 | 64 |
neural plate | 1.95e-07 | 64 |
presumptive neural plate | 1.95e-07 | 64 |
embryo | 2.80e-07 | 320 |
ecto-epithelium | 2.88e-07 | 73 |
regional part of cerebral cortex | 7.31e-07 | 17 |
brain | 9.28e-07 | 47 |
future brain | 9.28e-07 | 47 |