FFCP PHASE1:Mm9::chr13:9275915..9275960,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=208440|HGNC=|UniProt=B2RQ71|association_with_transcript=141bp_to_ENSMUST00000174552_5end|description=CAGE_peak_2_at_Dip2c_5end|id=chr13:9275915..9275960,+|ontology_enrichment_celltype=CL:0000393!1.02e-10!39;CL:0000211!1.02e-10!39;CL:0000540!1.29e-10!33;CL:0000047!1.29e-10!33;CL:0000031!1.29e-10!33;CL:0000404!1.29e-10!33;CL:0000221!9.72e-09!44;CL:0000133!9.72e-09!44;CL:0000055!1.03e-08!50;CL:0002319!1.86e-08!43;CL:0000117!6.62e-07!23;CL:0000337!6.62e-07!23|ontology_enrichment_celltype_v019_2=CL:0000393,4.64e-11,39;CL:0000211,4.64e-11,39;CL:0000540,5.96e-11,33;CL:0000047,5.96e-11,33;CL:0000031,5.96e-11,33;CL:0000404,5.96e-11,33;CL:0000221,1.14e-08,44;CL:0000133,1.14e-08,44;CL:0002319,2.22e-08,43;CL:0000117,4.18e-07,23;CL:0000337,4.18e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!2.18e-13!102;UBERON:0000924!2.18e-13!102;UBERON:0006601!2.18e-13!102;UBERON:0000073!2.97e-11!75;UBERON:0001016!2.97e-11!75;UBERON:0001017!3.07e-10!73;UBERON:0005743!3.07e-10!73;UBERON:0002346!1.60e-09!71;UBERON:0003075!1.60e-09!71;UBERON:0007284!1.60e-09!71;UBERON:0000468!4.01e-09!333;UBERON:0004111!3.28e-08!122;UBERON:0000025!3.44e-08!114;UBERON:0000922!3.29e-07!328|ontology_enrichment_uberon_v019_2=UBERON:0010314,6.74e-15,92;UBERON:0004121,1.71e-12,95;UBERON:0000924,1.71e-12,95;UBERON:0006601,1.71e-12,95;UBERON:0001016,3.40e-11,75;UBERON:0001017,3.67e-10,73;UBERON:0002346,3.87e-09,64;UBERON:0003075,3.87e-09,64;UBERON:0007284,3.87e-09,64;UBERON:0010371,4.68e-09,73;UBERON:0004111,1.75e-07,122;UBERON:0000025,1.79e-07,114;UBERON:0000010,7.28e-07,11|phase1_expression=1.76163731815273,0,0,0.30246421130683,0,0.839396359559449,0.700837921786577,0.129123323441576,0,0.234064526321993,0.171217968225505,0.0797721589953364,0.171200729931206,0.174840804837995,1.33243904726265,0.404950534779652,0.699561878128147,0,0,0,1.7008658030214,0.297872853602656,0,0.799962113967033,0,0,0,0.646413698057667,0,0,0,0,0,0,1.1554064790051,0.166234645358492,0.816677425049476,0,0,1.0470474879476,0,0,0,2.64383317748712,2.63580021170738,2.56965453026354,2.34717403304412,0.436050312760893,0.439372365468944,1.55543919259427,0.699932108126813,1.43752564364972,0,0.725362142011344,0,3.34437266846731,1.14613375975503,1.54701627683233,3.84401275633236,2.64495489636016,3.1691570175309,1.0165335962074,0,0,0,0.7104801149461,0.898800331555214,1.15265491596466,1.97010263386108,1.4850653216486,1.68259969081106,5.14171771926846,4.19650227808066,1.95985278743926,2.39613677545591,1.83843757322004,1.10115880999389,2.68143409978894,4.45458946443106,3.82470234417562,4.66586982372289,3.12548022334056,5.30447698102624,5.06486349028512,3.97275444219706,5.30331453852602,4.8406371471695,4.28718725398191,6.36100023998746,5.97015324843606,2.02905142091174,1.72084775396277,2.719885334831,0.539703191637817,2.59910566979068,3.13618820968135,2.38755514223978,2.21559419351475,1.81850203222008,0.70667914902068,2.95771181531029,3.84979432242953,12.7402619853323,0,0.432982082022428,0.253359865475099,0.505524445014783,0.91347103775248,0.776813650941515,1.7813056687779,0.867426633830679,1.52232739156071,2.99800146432876,3.3158980921577,3.64524992120685,2.26199864393416,0.988779870937496,1.3013942122792,0.884610551949874,2.58826959915855,1.10420759230197,0.484875253135222,0,1.75668478206928,1.67557365450764,0.255457055208591,0.479260498023681,0,0.254140454146129,3.2953940669061,2.74500361691176,2.89005009859588,2.60736480288415,2.04572365864264,2.28566849015516,2.92034273521964,2.03678727700633,0.497627882440372,1.0108910337347,2.31486041475121,2.34216797332867,1.83921683546778,1.44049703844279,3.0140963567143,4.01415344992834,3.84341160854549,4.12287588062807,1.55222022443409,0.862271971731369,1.13463648100692,0.879755620819744,1.09597866213787,1.94633074457919,3.48252166522167,2.46938563689532,1.39323986772945,0.702213187313235,0,0.284163499395593,1.24275463521301,1.64168241986767,2.88099298337624,1.65721314909647,4.72234156193769,3.23960937063494,3.95307706075693,3.75582761959467,3.73649095574942,4.44311594766397,7.55170334763838,7.70153690685629,5.4093995347373,4.39100230582101,6.84452735677896,3.15434922846191,1.64647379806855,0.991256348951394,0.264450566663544,1.49301775374664,1.85789337488351,1.9330119198314,1.21010114774006,1.55664630691409,1.33157938278791,0.474529061544512,1.97638745668813,1.50801125280162,1.39269530428806,0.974820435595601,0,1.08069024937347,0.995706366271836,1.32767530667157,1.71372768914593,2.25415471346161,1.83286195060783,4.07300223052014,2.80543279561274,2.84564417059158,3.39503340353085,2.19798218977925,3.33172342588861,2.07516838961004,0.83422552858047,0.196558995113203,0.449724224769707,0.811440485554012,0.964708639009667,0.50925170356284,0.575392274901621,0.810676133875177,0.549122826376163,7.18841032636773,0.372140947668503,1.87222603868736,0.505157755894224,0.717589654087649,1.4473305640901,0.923765950833023,1.70542270593436,1.46668478797823,1.35796068620151,2.58159273117352,2.34508760418542,1.19021820443007,3.70753930929818,3.31033802623001,3.32197034473162,2.23236676120482,2.29408640602033,2.24490476425664,2.60368305446721,0,0,1.47529281905711,1.10374698521893,3.69266356971921,2.93029216480508,0.327869890753351,1.76729649043061,3.47059041357882,3.90438744296638,6.46270193198397,5.4962823529087,6.01556420022464,7.35998980050964,1.21443210502468,5.84511715822624,6.32460444714438,3.85585579706168,4.82596289708113,1.42452482933804,2.93196526836437,2.47455184458803,1.32745138339963,0.728341908464944,0.906970670894253,0.754420319023592,0.590603785761546,2.15204603560749,2.06742634534577,2.54473610634254,1.78248689192361,2.21225730555071,2.10837217149998,1.03135543248187,2.7235168460303,3.24109969256358,1.81102157295856,0.643011105094777,1.59606210278046,0.891844088010353,1.64549020602121,1.2178597964584,1.17335854031855,2.1183207086382,1.10264199027481,1.48397627647332,2.74489525383039,2.23157822234177,2.02932984805332,1.80554989719567,2.04036585640896,4.45020724825223,0.512612642393558,2.06386867963222,1.66675074632741,0.376736914009382,0.410082683163076,0.686334519619568,1.35982743995084,0.69975726161829,0.829199842826543,0,1.10717597753397,3.04979200690273,1.29606408986162,2.50905955217362,1.52853794622324,2.29269388854195,2.89287095038676,2.35580347785627,1.55537967950151,2.4853572523477,0,1.79419855252775,0.66183396182839,2.72231663681667,1.6790777052105,2.87225413334323,2.11243029562357,1.8228613878153,1.78260885523708,0.241584120826006,0.576060012515731,0.316011120628178,0.608175645870493,1.1298205288131,0.909445760844565,0.716106782669926,0.993406773906324,0.480781798079875,0.295379054349154,0.403865799792591,0.457240839929999,0.302478555410522,0.38983152295901,0.288635524920988,0.350630706544707,2.0405734525369,0.221985953374065,0.717710852875806,0.335769232728157,2.89784391048286,2.064507229963,2.93042598827624,1.07184189539533,0.501572104035363,3.95326289831947,2.30162618253588,2.29158205375759,1.54667864109319,0,7.55393897389701,2.02506750069542,2.70192721934532,3.62513927187364,2.07104124700728,1.24544817101012,2.39414924040619,2.90247129782028,1.45864030240976,0.838452650511929,2.38996560985018,1.77797382241292,1.64828045791115,2.88827288632634,3.03236654116557,3.29523089857312,2.45214243801899,2.06011316433741,2.68905640100451,2.64203157195821,2.85776214769844,3.36064545240081,2.70072908649187,3.29668720642645,2.20798380201596,3.42869252385415,1.77475806159337,2.86123427936785,2.32554266611726,2.91739079287525,3.21535509988371,3.29270351170991,2.89376682581627,2.30866993537965,1.68342681497322,3.6776855618494,2.65962102414021,2.86461730218783,1.70430525304563,2.3148793317737,3.2475375131933,3.27504251823572,2.36358159453128,2.10417165275728,3.52946270591225,1.15933917810211|short_description=p2@Dip2c}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=208440 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=B2RQ71 | |||
|association_with_transcript=141bp_to_ENSMUST00000174552_5end | |||
|cluster_id=chr13:9275915..9275960,+ | |||
|description=CAGE_peak_2_at_Dip2c_5end | |||
|id=chr13:9275915..9275960,+ | |||
|ontology_enrichment_celltype=CL:0000393!1.02e-10!39;CL:0000211!1.02e-10!39;CL:0000540!1.29e-10!33;CL:0000047!1.29e-10!33;CL:0000031!1.29e-10!33;CL:0000404!1.29e-10!33;CL:0000221!9.72e-09!44;CL:0000133!9.72e-09!44;CL:0000055!1.03e-08!50;CL:0002319!1.86e-08!43;CL:0000117!6.62e-07!23;CL:0000337!6.62e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000393,4.64e-11,39;CL:0000211,4.64e-11,39;CL:0000540,5.96e-11,33;CL:0000047,5.96e-11,33;CL:0000031,5.96e-11,33;CL:0000404,5.96e-11,33;CL:0000221,1.14e-08,44;CL:0000133,1.14e-08,44;CL:0002319,2.22e-08,43;CL:0000117,4.18e-07,23;CL:0000337,4.18e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!2.18e-13!102;UBERON:0000924!2.18e-13!102;UBERON:0006601!2.18e-13!102;UBERON:0000073!2.97e-11!75;UBERON:0001016!2.97e-11!75;UBERON:0001017!3.07e-10!73;UBERON:0005743!3.07e-10!73;UBERON:0002346!1.60e-09!71;UBERON:0003075!1.60e-09!71;UBERON:0007284!1.60e-09!71;UBERON:0000468!4.01e-09!333;UBERON:0004111!3.28e-08!122;UBERON:0000025!3.44e-08!114;UBERON:0000922!3.29e-07!328 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,6.74e-15,92;UBERON:0004121,1.71e-12,95;UBERON:0000924,1.71e-12,95;UBERON:0006601,1.71e-12,95;UBERON:0001016,3.40e-11,75;UBERON:0001017,3.67e-10,73;UBERON:0002346,3.87e-09,64;UBERON:0003075,3.87e-09,64;UBERON:0007284,3.87e-09,64;UBERON:0010371,4.68e-09,73;UBERON:0004111,1.75e-07,122;UBERON:0000025,1.79e-07,114;UBERON:0000010,7.28e-07,11 | |||
|phase1_expression=1.76163731815273,0,0,0.30246421130683,0,0.839396359559449,0.700837921786577,0.129123323441576,0,0.234064526321993,0.171217968225505,0.0797721589953364,0.171200729931206,0.174840804837995,1.33243904726265,0.404950534779652,0.699561878128147,0,0,0,1.7008658030214,0.297872853602656,0,0.799962113967033,0,0,0,0.646413698057667,0,0,0,0,0,0,1.1554064790051,0.166234645358492,0.816677425049476,0,0,1.0470474879476,0,0,0,2.64383317748712,2.63580021170738,2.56965453026354,2.34717403304412,0.436050312760893,0.439372365468944,1.55543919259427,0.699932108126813,1.43752564364972,0,0.725362142011344,0,3.34437266846731,1.14613375975503,1.54701627683233,3.84401275633236,2.64495489636016,3.1691570175309,1.0165335962074,0,0,0,0.7104801149461,0.898800331555214,1.15265491596466,1.97010263386108,1.4850653216486,1.68259969081106,5.14171771926846,4.19650227808066,1.95985278743926,2.39613677545591,1.83843757322004,1.10115880999389,2.68143409978894,4.45458946443106,3.82470234417562,4.66586982372289,3.12548022334056,5.30447698102624,5.06486349028512,3.97275444219706,5.30331453852602,4.8406371471695,4.28718725398191,6.36100023998746,5.97015324843606,2.02905142091174,1.72084775396277,2.719885334831,0.539703191637817,2.59910566979068,3.13618820968135,2.38755514223978,2.21559419351475,1.81850203222008,0.70667914902068,2.95771181531029,3.84979432242953,12.7402619853323,0,0.432982082022428,0.253359865475099,0.505524445014783,0.91347103775248,0.776813650941515,1.7813056687779,0.867426633830679,1.52232739156071,2.99800146432876,3.3158980921577,3.64524992120685,2.26199864393416,0.988779870937496,1.3013942122792,0.884610551949874,2.58826959915855,1.10420759230197,0.484875253135222,0,1.75668478206928,1.67557365450764,0.255457055208591,0.479260498023681,0,0.254140454146129,3.2953940669061,2.74500361691176,2.89005009859588,2.60736480288415,2.04572365864264,2.28566849015516,2.92034273521964,2.03678727700633,0.497627882440372,1.0108910337347,2.31486041475121,2.34216797332867,1.83921683546778,1.44049703844279,3.0140963567143,4.01415344992834,3.84341160854549,4.12287588062807,1.55222022443409,0.862271971731369,1.13463648100692,0.879755620819744,1.09597866213787,1.94633074457919,3.48252166522167,2.46938563689532,1.39323986772945,0.702213187313235,0,0.284163499395593,1.24275463521301,1.64168241986767,2.88099298337624,1.65721314909647,4.72234156193769,3.23960937063494,3.95307706075693,3.75582761959467,3.73649095574942,4.44311594766397,7.55170334763838,7.70153690685629,5.4093995347373,4.39100230582101,6.84452735677896,3.15434922846191,1.64647379806855,0.991256348951394,0.264450566663544,1.49301775374664,1.85789337488351,1.9330119198314,1.21010114774006,1.55664630691409,1.33157938278791,0.474529061544512,1.97638745668813,1.50801125280162,1.39269530428806,0.974820435595601,0,1.08069024937347,0.995706366271836,1.32767530667157,1.71372768914593,2.25415471346161,1.83286195060783,4.07300223052014,2.80543279561274,2.84564417059158,3.39503340353085,2.19798218977925,3.33172342588861,2.07516838961004,0.83422552858047,0.196558995113203,0.449724224769707,0.811440485554012,0.964708639009667,0.50925170356284,0.575392274901621,0.810676133875177,0.549122826376163,7.18841032636773,0.372140947668503,1.87222603868736,0.505157755894224,0.717589654087649,1.4473305640901,0.923765950833023,1.70542270593436,1.46668478797823,1.35796068620151,2.58159273117352,2.34508760418542,1.19021820443007,3.70753930929818,3.31033802623001,3.32197034473162,2.23236676120482,2.29408640602033,2.24490476425664,2.60368305446721,0,0,1.47529281905711,1.10374698521893,3.69266356971921,2.93029216480508,0.327869890753351,1.76729649043061,3.47059041357882,3.90438744296638,6.46270193198397,5.4962823529087,6.01556420022464,7.35998980050964,1.21443210502468,5.84511715822624,6.32460444714438,3.85585579706168,4.82596289708113,1.42452482933804,2.93196526836437,2.47455184458803,1.32745138339963,0.728341908464944,0.906970670894253,0.754420319023592,0.590603785761546,2.15204603560749,2.06742634534577,2.54473610634254,1.78248689192361,2.21225730555071,2.10837217149998,1.03135543248187,2.7235168460303,3.24109969256358,1.81102157295856,0.643011105094777,1.59606210278046,0.891844088010353,1.64549020602121,1.2178597964584,1.17335854031855,2.1183207086382,1.10264199027481,1.48397627647332,2.74489525383039,2.23157822234177,2.02932984805332,1.80554989719567,2.04036585640896,4.45020724825223,0.512612642393558,2.06386867963222,1.66675074632741,0.376736914009382,0.410082683163076,0.686334519619568,1.35982743995084,0.69975726161829,0.829199842826543,0,1.10717597753397,3.04979200690273,1.29606408986162,2.50905955217362,1.52853794622324,2.29269388854195,2.89287095038676,2.35580347785627,1.55537967950151,2.4853572523477,0,1.79419855252775,0.66183396182839,2.72231663681667,1.6790777052105,2.87225413334323,2.11243029562357,1.8228613878153,1.78260885523708,0.241584120826006,0.576060012515731,0.316011120628178,0.608175645870493,1.1298205288131,0.909445760844565,0.716106782669926,0.993406773906324,0.480781798079875,0.295379054349154,0.403865799792591,0.457240839929999,0.302478555410522,0.38983152295901,0.288635524920988,0.350630706544707,2.0405734525369,0.221985953374065,0.717710852875806,0.335769232728157,2.89784391048286,2.064507229963,2.93042598827624,1.07184189539533,0.501572104035363,3.95326289831947,2.30162618253588,2.29158205375759,1.54667864109319,0,7.55393897389701,2.02506750069542,2.70192721934532,3.62513927187364,2.07104124700728,1.24544817101012,2.39414924040619,2.90247129782028,1.45864030240976,0.838452650511929,2.38996560985018,1.77797382241292,1.64828045791115,2.88827288632634,3.03236654116557,3.29523089857312,2.45214243801899,2.06011316433741,2.68905640100451,2.64203157195821,2.85776214769844,3.36064545240081,2.70072908649187,3.29668720642645,2.20798380201596,3.42869252385415,1.77475806159337,2.86123427936785,2.32554266611726,2.91739079287525,3.21535509988371,3.29270351170991,2.89376682581627,2.30866993537965,1.68342681497322,3.6776855618494,2.65962102414021,2.86461730218783,1.70430525304563,2.3148793317737,3.2475375131933,3.27504251823572,2.36358159453128,2.10417165275728,3.52946270591225,1.15933917810211 | |||
|short_description=p2@Dip2c | |||
}} |
Latest revision as of 00:17, 2 October 2015
Short description: | p2@Dip2c |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Dip2c_5end |
Coexpression cluster: | NA |
Association with transcript: | 141bp_to_ENSMUST00000174552_5end |
EntrezGene: | Dip2c |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 4.64e-11 | 39 |
electrically active cell | 4.64e-11 | 39 |
neuron | 5.96e-11 | 33 |
neuronal stem cell | 5.96e-11 | 33 |
neuroblast | 5.96e-11 | 33 |
electrically signaling cell | 5.96e-11 | 33 |
ectodermal cell | 1.14e-08 | 44 |
neurectodermal cell | 1.14e-08 | 44 |
neural cell | 2.22e-08 | 43 |
CNS neuron (sensu Vertebrata) | 4.18e-07 | 23 |
neuroblast (sensu Vertebrata) | 4.18e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 6.74e-15 | 92 |
ectoderm-derived structure | 1.71e-12 | 95 |
ectoderm | 1.71e-12 | 95 |
presumptive ectoderm | 1.71e-12 | 95 |
nervous system | 3.40e-11 | 75 |
central nervous system | 3.67e-10 | 73 |
neurectoderm | 3.87e-09 | 64 |
neural plate | 3.87e-09 | 64 |
presumptive neural plate | 3.87e-09 | 64 |
ecto-epithelium | 4.68e-09 | 73 |
anatomical conduit | 1.75e-07 | 122 |
tube | 1.79e-07 | 114 |
peripheral nervous system | 7.28e-07 | 11 |