FFCP PHASE1:Mm9::chr13:88961199..88961208,+: Difference between revisions
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{{FFCP|EntrezGene=13612|HGNC=|MCL_coexpression_id=1|UniProt=|association_with_transcript=-10bp_to_ENSMUST00000137921_5end|description=CAGE_peak_8_at_Edil3_5end|id=chr13:88961199..88961208,+|ontology_enrichment_celltype=CL:0000540!1.51e-17!33;CL:0000047!1.51e-17!33;CL:0000031!1.51e-17!33;CL:0000404!1.51e-17!33;CL:0000117!1.13e-16!23;CL:0000337!1.13e-16!23;CL:0000393!4.99e-13!39;CL:0000211!4.99e-13!39;CL:0002319!2.57e-12!43;CL:0000221!9.01e-12!44;CL:0000133!9.01e-12!44;CL:0000055!5.08e-09!50|ontology_enrichment_celltype_v019_2=CL:0000117,1.34e-19,23;CL:0000337,1.34e-19,23;CL:0000540,1.57e-12,33;CL:0000047,1.57e-12,33;CL:0000031,1.57e-12,33;CL:0000404,1.57e-12,33;CL:0000393,4.79e-10,39;CL:0000211,4.79e-10,39;CL:0002319,8.80e-09,43;CL:0000221,1.67e-08,44;CL:0000133,1.67e-08,44;CL:0002610,6.91e-08,3;CL:0002614,6.28e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!5.02e-33!75;UBERON:0001016!5.02e-33!75;UBERON:0001017!1.97e-32!73;UBERON:0005743!1.97e-32!73;UBERON:0001049!1.22e-27!52;UBERON:0005068!1.22e-27!52;UBERON:0006241!1.22e-27!52;UBERON:0007135!1.22e-27!52;UBERON:0000955!1.38e-26!50;UBERON:0006238!1.38e-26!50;UBERON:0002616!9.16e-26!49;UBERON:0004121!2.49e-25!102;UBERON:0000924!2.49e-25!102;UBERON:0006601!2.49e-25!102;UBERON:0000033!1.54e-24!63;UBERON:0002346!2.88e-24!71;UBERON:0003075!2.88e-24!71;UBERON:0007284!2.88e-24!71;UBERON:0002020!8.08e-23!34;UBERON:0003080!4.46e-22!40;UBERON:0003056!6.05e-22!49;UBERON:0002780!3.23e-21!39;UBERON:0001890!3.23e-21!39;UBERON:0006240!3.23e-21!39;UBERON:0002791!3.34e-19!29;UBERON:0003528!3.34e-19!29;UBERON:0001893!3.34e-19!29;UBERON:0000956!1.65e-13!21;UBERON:0001869!1.65e-13!21;UBERON:0000203!1.65e-13!21;UBERON:0000153!6.04e-13!94;UBERON:0007811!8.20e-13!86;UBERON:0002619!3.84e-11!17;UBERON:0002021!1.58e-10!10;UBERON:0000411!1.58e-10!10;UBERON:0001950!1.58e-10!10;UBERON:0000025!2.07e-07!114;UBERON:0002420!6.56e-07!8;UBERON:0007245!6.56e-07!8;UBERON:0010009!6.56e-07!8;UBERON:0010011!6.56e-07!8;UBERON:0000454!6.56e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.99e-39,54;UBERON:0001017,5.00e-37,73;UBERON:0001016,7.98e-36,75;UBERON:0001049,5.77e-35,52;UBERON:0005068,5.77e-35,52;UBERON:0006241,5.77e-35,52;UBERON:0007135,5.77e-35,52;UBERON:0002020,1.06e-32,34;UBERON:0000955,2.45e-29,47;UBERON:0006238,2.45e-29,47;UBERON:0002616,9.68e-28,46;UBERON:0003080,1.49e-27,40;UBERON:0003528,3.26e-27,29;UBERON:0002791,3.26e-27,29;UBERON:0001893,3.26e-27,29;UBERON:0002346,4.93e-27,64;UBERON:0003075,4.93e-27,64;UBERON:0007284,4.93e-27,64;UBERON:0004121,1.43e-26,95;UBERON:0000924,1.43e-26,95;UBERON:0006601,1.43e-26,95;UBERON:0002780,7.99e-26,39;UBERON:0001890,7.99e-26,39;UBERON:0006240,7.99e-26,39;UBERON:0002021,3.39e-23,10;UBERON:0000411,3.39e-23,10;UBERON:0001950,3.39e-23,10;UBERON:0010371,8.52e-23,73;UBERON:0003056,2.23e-21,49;UBERON:0002619,3.75e-21,17;UBERON:0000956,2.46e-19,21;UBERON:0001869,2.46e-19,21;UBERON:0000203,2.46e-19,21;UBERON:0010314,1.42e-16,92;UBERON:0000025,5.72e-12,114;UBERON:0004111,1.04e-10,122;UBERON:0002420,6.63e-09,8;UBERON:0007245,6.63e-09,8;UBERON:0010009,6.63e-09,8;UBERON:0010011,6.63e-09,8;UBERON:0000454,6.63e-09,8;UBERON:0002950,7.08e-09,4;UBERON:0001891,7.08e-09,4;UBERON:0009616,7.08e-09,4;UBERON:0010286,7.08e-09,4;UBERON:0011216,8.96e-09,194;UBERON:0002240,2.23e-08,6;UBERON:0005174,2.23e-08,6;UBERON:0001137,2.23e-08,6;UBERON:0004684,6.91e-08,3;UBERON:0002275,6.91e-08,3;UBERON:0003076,1.15e-07,12;UBERON:0003057,1.15e-07,12;UBERON:0002038,6.28e-07,3;UBERON:0009663,6.28e-07,3;UBERON:0009661,6.28e-07,3;UBERON:0000125,6.28e-07,3;UBERON:0002308,6.28e-07,3|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61853168687678,1.5869729378161,1.26766280701236,0,0,0,0,0,0,0,0.933206510776299,0.270011876663381,0.841299845405528,1.42825492201902,0.662605622854841,0.367472397644862,0.383381884072945,2.75765635983006,5.50579404996943,3.83062014255563,2.76491759861238,0.527545150920775,1.18933936683133,1.04182674111352,1.11673199600552,3.93933827022176,1.83357897332172,1.17851434189467,1.99320353118744,1.4911955666024,0.075726193333184,0.302286240427142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0.150722640552623,0.117588707135705,0,0,0,0,0,0,0,0,0.292780797011547,0.83778682725382,0,0,0,0,3.2953940669061,4.11750542536764,0.502617408451458,3.65031072403781,3.58001640262463,3.74018480207208,2.92034273521964,0,0,0,0,0.650602214813519,0,0.180062129805349,0.452114453507145,0.204109497453984,0.512454881139399,0.187403449119458,0,0,0.378212160335639,0.351902248327898,0.219195732427575,0,0,0.411564272815887,0.199034266818493,0.702213187313235,0,0,0,0.469052119962192,0.180062061461015,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0,2.10289948564127,1.85228302282712,0,0,0.213288250535234,0.232236671860439,0.257734922644187,0.201683524623343,0,0,0,0,0,0.198956472041151,0,0,0,0,0.1896679009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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=13612 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-10bp_to_ENSMUST00000137921_5end | |||
|cluster_id=chr13:88961199..88961208,+ | |||
|description=CAGE_peak_8_at_Edil3_5end | |||
|id=chr13:88961199..88961208,+ | |||
|ontology_enrichment_celltype=CL:0000540!1.51e-17!33;CL:0000047!1.51e-17!33;CL:0000031!1.51e-17!33;CL:0000404!1.51e-17!33;CL:0000117!1.13e-16!23;CL:0000337!1.13e-16!23;CL:0000393!4.99e-13!39;CL:0000211!4.99e-13!39;CL:0002319!2.57e-12!43;CL:0000221!9.01e-12!44;CL:0000133!9.01e-12!44;CL:0000055!5.08e-09!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.34e-19,23;CL:0000337,1.34e-19,23;CL:0000540,1.57e-12,33;CL:0000047,1.57e-12,33;CL:0000031,1.57e-12,33;CL:0000404,1.57e-12,33;CL:0000393,4.79e-10,39;CL:0000211,4.79e-10,39;CL:0002319,8.80e-09,43;CL:0000221,1.67e-08,44;CL:0000133,1.67e-08,44;CL:0002610,6.91e-08,3;CL:0002614,6.28e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!5.02e-33!75;UBERON:0001016!5.02e-33!75;UBERON:0001017!1.97e-32!73;UBERON:0005743!1.97e-32!73;UBERON:0001049!1.22e-27!52;UBERON:0005068!1.22e-27!52;UBERON:0006241!1.22e-27!52;UBERON:0007135!1.22e-27!52;UBERON:0000955!1.38e-26!50;UBERON:0006238!1.38e-26!50;UBERON:0002616!9.16e-26!49;UBERON:0004121!2.49e-25!102;UBERON:0000924!2.49e-25!102;UBERON:0006601!2.49e-25!102;UBERON:0000033!1.54e-24!63;UBERON:0002346!2.88e-24!71;UBERON:0003075!2.88e-24!71;UBERON:0007284!2.88e-24!71;UBERON:0002020!8.08e-23!34;UBERON:0003080!4.46e-22!40;UBERON:0003056!6.05e-22!49;UBERON:0002780!3.23e-21!39;UBERON:0001890!3.23e-21!39;UBERON:0006240!3.23e-21!39;UBERON:0002791!3.34e-19!29;UBERON:0003528!3.34e-19!29;UBERON:0001893!3.34e-19!29;UBERON:0000956!1.65e-13!21;UBERON:0001869!1.65e-13!21;UBERON:0000203!1.65e-13!21;UBERON:0000153!6.04e-13!94;UBERON:0007811!8.20e-13!86;UBERON:0002619!3.84e-11!17;UBERON:0002021!1.58e-10!10;UBERON:0000411!1.58e-10!10;UBERON:0001950!1.58e-10!10;UBERON:0000025!2.07e-07!114;UBERON:0002420!6.56e-07!8;UBERON:0007245!6.56e-07!8;UBERON:0010009!6.56e-07!8;UBERON:0010011!6.56e-07!8;UBERON:0000454!6.56e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.99e-39,54;UBERON:0001017,5.00e-37,73;UBERON:0001016,7.98e-36,75;UBERON:0001049,5.77e-35,52;UBERON:0005068,5.77e-35,52;UBERON:0006241,5.77e-35,52;UBERON:0007135,5.77e-35,52;UBERON:0002020,1.06e-32,34;UBERON:0000955,2.45e-29,47;UBERON:0006238,2.45e-29,47;UBERON:0002616,9.68e-28,46;UBERON:0003080,1.49e-27,40;UBERON:0003528,3.26e-27,29;UBERON:0002791,3.26e-27,29;UBERON:0001893,3.26e-27,29;UBERON:0002346,4.93e-27,64;UBERON:0003075,4.93e-27,64;UBERON:0007284,4.93e-27,64;UBERON:0004121,1.43e-26,95;UBERON:0000924,1.43e-26,95;UBERON:0006601,1.43e-26,95;UBERON:0002780,7.99e-26,39;UBERON:0001890,7.99e-26,39;UBERON:0006240,7.99e-26,39;UBERON:0002021,3.39e-23,10;UBERON:0000411,3.39e-23,10;UBERON:0001950,3.39e-23,10;UBERON:0010371,8.52e-23,73;UBERON:0003056,2.23e-21,49;UBERON:0002619,3.75e-21,17;UBERON:0000956,2.46e-19,21;UBERON:0001869,2.46e-19,21;UBERON:0000203,2.46e-19,21;UBERON:0010314,1.42e-16,92;UBERON:0000025,5.72e-12,114;UBERON:0004111,1.04e-10,122;UBERON:0002420,6.63e-09,8;UBERON:0007245,6.63e-09,8;UBERON:0010009,6.63e-09,8;UBERON:0010011,6.63e-09,8;UBERON:0000454,6.63e-09,8;UBERON:0002950,7.08e-09,4;UBERON:0001891,7.08e-09,4;UBERON:0009616,7.08e-09,4;UBERON:0010286,7.08e-09,4;UBERON:0011216,8.96e-09,194;UBERON:0002240,2.23e-08,6;UBERON:0005174,2.23e-08,6;UBERON:0001137,2.23e-08,6;UBERON:0004684,6.91e-08,3;UBERON:0002275,6.91e-08,3;UBERON:0003076,1.15e-07,12;UBERON:0003057,1.15e-07,12;UBERON:0002038,6.28e-07,3;UBERON:0009663,6.28e-07,3;UBERON:0009661,6.28e-07,3;UBERON:0000125,6.28e-07,3;UBERON:0002308,6.28e-07,3 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61853168687678,1.5869729378161,1.26766280701236,0,0,0,0,0,0,0,0.933206510776299,0.270011876663381,0.841299845405528,1.42825492201902,0.662605622854841,0.367472397644862,0.383381884072945,2.75765635983006,5.50579404996943,3.83062014255563,2.76491759861238,0.527545150920775,1.18933936683133,1.04182674111352,1.11673199600552,3.93933827022176,1.83357897332172,1.17851434189467,1.99320353118744,1.4911955666024,0.075726193333184,0.302286240427142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0.150722640552623,0.117588707135705,0,0,0,0,0,0,0,0,0.292780797011547,0.83778682725382,0,0,0,0,3.2953940669061,4.11750542536764,0.502617408451458,3.65031072403781,3.58001640262463,3.74018480207208,2.92034273521964,0,0,0,0,0.650602214813519,0,0.180062129805349,0.452114453507145,0.204109497453984,0.512454881139399,0.187403449119458,0,0,0.378212160335639,0.351902248327898,0.219195732427575,0,0,0.411564272815887,0.199034266818493,0.702213187313235,0,0,0,0.469052119962192,0.180062061461015,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0,2.10289948564127,1.85228302282712,0,0,0.213288250535234,0.232236671860439,0.257734922644187,0.201683524623343,0,0,0,0,0,0.198956472041151,0,0,0,0,0.189667900953082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0.714130922658041,0,0.315270288212382,0.221464689648775,0,0,0.172684981865896,0.144649058581512,0,0,0,0,2.56880943980467,3.28192722458169,0.163934945376675,0,0,0,0.215423397732799,0.238968797952552,0.445597348164788,0.283076530788832,0.404810701674894,0.584511715822624,0.395287777946524,1.92792789853084,0,0.178065603667255,0.162886959353576,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,1.70219802876894,0.36012218806262,0.129358683782755,0.428674070063185,0,0.178368817602071,0.329098041204242,0,0,0,0,0,0,0,0,0,0,3.33765543618917,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0,0,0,0.404593039154462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.51801474093653,2.76195141904306,5.15605962095457,3.43706364687375,4.7955776383945,6.7985450765073,4.72515750162264,4.05289082901798,3.62513927187364,4.65984280576638,0.103787347584177,0,1.19513524027894,0,0,0.183843508450014,1.11123363900808,0.412070114477788,0.320919209591815,1.01078884705519,0.50695859978048,0.377252682772152,0.0936415074698824,0.448176066834085,0.34461281373368,0,0.347652977834566,0.192909220463705,0,0.588795680537589,0.342869252385415,0.354951612318675,0,0.290692833264657,0.282328141245992,0.169229215783353,0.182927972872773,0,0.135804113845862,0.561142271657738,0.237270036248348,0.197008964751127,0,0.309873682371932,0,0.249810577937946,0.233931608445408,0.429742108096597,0,0,0.927471342481686 | |||
|short_description=p8@Edil3 | |||
}} |
Latest revision as of 23:51, 1 October 2015
Short description: | p8@Edil3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Edil3_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -10bp_to_ENSMUST00000137921_5end |
EntrezGene: | Edil3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.34e-19 | 23 |
neuroblast (sensu Vertebrata) | 1.34e-19 | 23 |
neuron | 1.57e-12 | 33 |
neuronal stem cell | 1.57e-12 | 33 |
neuroblast | 1.57e-12 | 33 |
electrically signaling cell | 1.57e-12 | 33 |
electrically responsive cell | 4.79e-10 | 39 |
electrically active cell | 4.79e-10 | 39 |
neural cell | 8.80e-09 | 43 |
ectodermal cell | 1.67e-08 | 44 |
neurectodermal cell | 1.67e-08 | 44 |
raphe nuclei neuron | 6.91e-08 | 3 |
neuron of the substantia nigra | 6.28e-07 | 3 |