FFCP PHASE1:Mm9::chr13:83878479..83878492,+: Difference between revisions
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{{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=76|UniProt=|association_with_transcript=0bp_to_ENSMUST00000052354_5end|description=CAGE_peak_1_at_ENSMUST00000052354_5end|id=chr13:83878479..83878492,+|ontology_enrichment_celltype=CL:0000540!6.57e-18!33;CL:0000047!6.57e-18!33;CL:0000031!6.57e-18!33;CL:0000404!6.57e-18!33;CL:0000117!6.97e-17!23;CL:0000337!6.97e-17!23;CL:0000393!1.75e-15!39;CL:0000211!1.75e-15!39;CL:0000221!8.24e-15!44;CL:0000133!8.24e-15!44;CL:0002319!4.71e-14!43;CL:0000055!4.00e-12!50;CL:0002609!6.71e-08!6|ontology_enrichment_celltype_v019_2=CL:0000117,9.10e-26,23;CL:0000337,9.10e-26,23;CL:0000540,8.69e-19,33;CL:0000047,8.69e-19,33;CL:0000031,8.69e-19,33;CL:0000404,8.69e-19,33;CL:0002609,1.44e-15,6;CL:0000393,3.16e-15,39;CL:0000211,3.16e-15,39;CL:0000221,1.18e-14,44;CL:0000133,1.18e-14,44;CL:0002319,2.08e-13,43;CL:0002608,2.36e-08,3;CL:0002321,1.43e-07,70;CL:0000120,1.61e-07,3;CL:0002612,1.98e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!5.29e-27!75;UBERON:0001016!5.29e-27!75;UBERON:0001017!3.41e-26!73;UBERON:0005743!3.41e-26!73;UBERON:0000033!3.78e-26!63;UBERON:0004121!1.56e-25!102;UBERON:0000924!1.56e-25!102;UBERON:0006601!1.56e-25!102;UBERON:0002346!8.56e-25!71;UBERON:0003075!8.56e-25!71;UBERON:0007284!8.56e-25!71;UBERON:0002020!1.20e-23!34;UBERON:0003056!2.56e-22!49;UBERON:0001049!5.92e-22!52;UBERON:0005068!5.92e-22!52;UBERON:0006241!5.92e-22!52;UBERON:0007135!5.92e-22!52;UBERON:0002791!1.34e-19!29;UBERON:0003528!1.34e-19!29;UBERON:0001893!1.34e-19!29;UBERON:0000955!3.29e-19!50;UBERON:0006238!3.29e-19!50;UBERON:0002616!1.73e-18!49;UBERON:0003080!6.81e-16!40;UBERON:0000956!9.21e-16!21;UBERON:0001869!9.21e-16!21;UBERON:0000203!9.21e-16!21;UBERON:0002780!3.73e-15!39;UBERON:0001890!3.73e-15!39;UBERON:0006240!3.73e-15!39;UBERON:0007811!1.24e-14!86;UBERON:0000153!4.77e-12!94;UBERON:0002619!8.46e-12!17;UBERON:0000020!3.65e-08!12;UBERON:0001032!3.65e-08!12;UBERON:0004456!3.65e-08!12;UBERON:0002021!4.28e-08!10;UBERON:0000411!4.28e-08!10;UBERON:0001950!4.28e-08!10;UBERON:0000970!1.32e-07!9;UBERON:0000019!1.32e-07!9;UBERON:0000047!1.32e-07!9;UBERON:0004088!1.32e-07!9;UBERON:0002104!1.32e-07!9;UBERON:0001456!1.32e-07!9;UBERON:0003072!1.32e-07!9;UBERON:0003071!1.32e-07!9;UBERON:0004128!1.32e-07!9;UBERON:0005085!2.75e-07!13;UBERON:0003076!8.80e-07!12;UBERON:0003057!8.80e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.00e-31,34;UBERON:0002346,9.26e-29,64;UBERON:0003075,9.26e-29,64;UBERON:0007284,9.26e-29,64;UBERON:0004121,2.96e-28,95;UBERON:0000924,2.96e-28,95;UBERON:0006601,2.96e-28,95;UBERON:0010371,4.57e-28,73;UBERON:0003528,4.86e-28,29;UBERON:0002791,4.86e-28,29;UBERON:0001893,4.86e-28,29;UBERON:0000073,1.80e-27,54;UBERON:0003056,6.85e-27,49;UBERON:0000956,4.54e-26,21;UBERON:0001869,4.54e-26,21;UBERON:0000203,4.54e-26,21;UBERON:0001017,1.19e-25,73;UBERON:0001016,8.91e-25,75;UBERON:0001049,2.21e-24,52;UBERON:0005068,2.21e-24,52;UBERON:0006241,2.21e-24,52;UBERON:0007135,2.21e-24,52;UBERON:0002616,1.67e-21,46;UBERON:0003080,5.60e-21,40;UBERON:0000955,6.31e-21,47;UBERON:0006238,6.31e-21,47;UBERON:0010314,9.34e-21,92;UBERON:0002780,1.40e-19,39;UBERON:0001890,1.40e-19,39;UBERON:0006240,1.40e-19,39;UBERON:0002619,8.13e-18,17;UBERON:0002021,1.69e-13,10;UBERON:0000411,1.69e-13,10;UBERON:0001950,1.69e-13,10;UBERON:0000020,9.12e-09,12;UBERON:0001032,9.12e-09,12;UBERON:0004456,9.12e-09,12;UBERON:0004111,1.66e-08,122;UBERON:0000033,5.22e-08,13;UBERON:0005085,5.22e-08,13;UBERON:0000025,8.16e-08,114;UBERON:0000483,1.69e-07,174;UBERON:0002257,1.98e-07,3;UBERON:0000119,2.50e-07,176|phase1_expression=1.12104192973356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0.183546752161682,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,1.61853168687678,2.11596391708813,1.26766280701236,0,0,0,0,0,0,0,10.6800300677732,6.34527910158946,6.94072372459561,0.856952953211411,0.441737081903227,3.42974237801871,2.77951865952885,2.75765635983006,0,1.0214987046815,2.15049146558741,1.05509030184155,1.00636407962651,0,0.279182999001381,1.12552522006336,0.61119299110724,2.65165726926301,1.56608848879013,1.1183966749518,0.227178579999552,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,1.26759077799012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.878342391034642,1.46612694769419,0,0,0,0,1.04853447583376,0.457500602818626,2.1361239859187,1.04294592115366,1.27857728665165,0.20778804455956,0.811206315338788,0,0,0,0.210441855886474,0.130120442962704,1.14951052216736,0.360124259610698,2.26057226753573,2.65342346690179,4.61209393025459,3.09215691047105,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,4.32199371992995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210407459670956,0,0.147610147979602,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12385412991454,0.703270119553219,0,0,0.631016438832513,0,0.861693590931196,0,0.222798674082394,0.283076530788832,0.404810701674894,0,0.395287777946524,0.963963949265421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0.220528398054962,0,0,0,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0,0,0,0,0,0,3.95326289831947,1.38097570952153,1.71868654031819,1.89038500578056,1.37016503954128,0,1.35004500046361,1.35096360967266,0.906284817968409,1.03552062350364,0.62272408550506,0.399024873401031,0.853668028770671,0.486213434136588,0.419226325255965,0,0.888986911206461,0.206035057238894,0,0.252697211763798,0.50695859978048,0.188626341386076,0.280924522409647,0.256100609619477,0.287177344778066,0.476293691283074,0.811190281613988,0.964546102318525,0,0.147198920134397,0.342869252385415,0.532427418478012,1.1921809497366,0.145346416632329,0.282328141245992,0.507687647350059,0.548783918618318,0,0.950628796921032,0.561142271657738,0,0.591026894253381,0.409231043169689,0,0.578719832943424,0.749431733813838,0.233931608445408,0.214871054048298,0,0,0.231867835620421|short_description=p1@ENSMUST00000052354}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=76 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000052354_5end | |||
|cluster_id=chr13:83878479..83878492,+ | |||
|description=CAGE_peak_1_at_ENSMUST00000052354_5end | |||
|id=chr13:83878479..83878492,+ | |||
|ontology_enrichment_celltype=CL:0000540!6.57e-18!33;CL:0000047!6.57e-18!33;CL:0000031!6.57e-18!33;CL:0000404!6.57e-18!33;CL:0000117!6.97e-17!23;CL:0000337!6.97e-17!23;CL:0000393!1.75e-15!39;CL:0000211!1.75e-15!39;CL:0000221!8.24e-15!44;CL:0000133!8.24e-15!44;CL:0002319!4.71e-14!43;CL:0000055!4.00e-12!50;CL:0002609!6.71e-08!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,9.10e-26,23;CL:0000337,9.10e-26,23;CL:0000540,8.69e-19,33;CL:0000047,8.69e-19,33;CL:0000031,8.69e-19,33;CL:0000404,8.69e-19,33;CL:0002609,1.44e-15,6;CL:0000393,3.16e-15,39;CL:0000211,3.16e-15,39;CL:0000221,1.18e-14,44;CL:0000133,1.18e-14,44;CL:0002319,2.08e-13,43;CL:0002608,2.36e-08,3;CL:0002321,1.43e-07,70;CL:0000120,1.61e-07,3;CL:0002612,1.98e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!5.29e-27!75;UBERON:0001016!5.29e-27!75;UBERON:0001017!3.41e-26!73;UBERON:0005743!3.41e-26!73;UBERON:0000033!3.78e-26!63;UBERON:0004121!1.56e-25!102;UBERON:0000924!1.56e-25!102;UBERON:0006601!1.56e-25!102;UBERON:0002346!8.56e-25!71;UBERON:0003075!8.56e-25!71;UBERON:0007284!8.56e-25!71;UBERON:0002020!1.20e-23!34;UBERON:0003056!2.56e-22!49;UBERON:0001049!5.92e-22!52;UBERON:0005068!5.92e-22!52;UBERON:0006241!5.92e-22!52;UBERON:0007135!5.92e-22!52;UBERON:0002791!1.34e-19!29;UBERON:0003528!1.34e-19!29;UBERON:0001893!1.34e-19!29;UBERON:0000955!3.29e-19!50;UBERON:0006238!3.29e-19!50;UBERON:0002616!1.73e-18!49;UBERON:0003080!6.81e-16!40;UBERON:0000956!9.21e-16!21;UBERON:0001869!9.21e-16!21;UBERON:0000203!9.21e-16!21;UBERON:0002780!3.73e-15!39;UBERON:0001890!3.73e-15!39;UBERON:0006240!3.73e-15!39;UBERON:0007811!1.24e-14!86;UBERON:0000153!4.77e-12!94;UBERON:0002619!8.46e-12!17;UBERON:0000020!3.65e-08!12;UBERON:0001032!3.65e-08!12;UBERON:0004456!3.65e-08!12;UBERON:0002021!4.28e-08!10;UBERON:0000411!4.28e-08!10;UBERON:0001950!4.28e-08!10;UBERON:0000970!1.32e-07!9;UBERON:0000019!1.32e-07!9;UBERON:0000047!1.32e-07!9;UBERON:0004088!1.32e-07!9;UBERON:0002104!1.32e-07!9;UBERON:0001456!1.32e-07!9;UBERON:0003072!1.32e-07!9;UBERON:0003071!1.32e-07!9;UBERON:0004128!1.32e-07!9;UBERON:0005085!2.75e-07!13;UBERON:0003076!8.80e-07!12;UBERON:0003057!8.80e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.00e-31,34;UBERON:0002346,9.26e-29,64;UBERON:0003075,9.26e-29,64;UBERON:0007284,9.26e-29,64;UBERON:0004121,2.96e-28,95;UBERON:0000924,2.96e-28,95;UBERON:0006601,2.96e-28,95;UBERON:0010371,4.57e-28,73;UBERON:0003528,4.86e-28,29;UBERON:0002791,4.86e-28,29;UBERON:0001893,4.86e-28,29;UBERON:0000073,1.80e-27,54;UBERON:0003056,6.85e-27,49;UBERON:0000956,4.54e-26,21;UBERON:0001869,4.54e-26,21;UBERON:0000203,4.54e-26,21;UBERON:0001017,1.19e-25,73;UBERON:0001016,8.91e-25,75;UBERON:0001049,2.21e-24,52;UBERON:0005068,2.21e-24,52;UBERON:0006241,2.21e-24,52;UBERON:0007135,2.21e-24,52;UBERON:0002616,1.67e-21,46;UBERON:0003080,5.60e-21,40;UBERON:0000955,6.31e-21,47;UBERON:0006238,6.31e-21,47;UBERON:0010314,9.34e-21,92;UBERON:0002780,1.40e-19,39;UBERON:0001890,1.40e-19,39;UBERON:0006240,1.40e-19,39;UBERON:0002619,8.13e-18,17;UBERON:0002021,1.69e-13,10;UBERON:0000411,1.69e-13,10;UBERON:0001950,1.69e-13,10;UBERON:0000020,9.12e-09,12;UBERON:0001032,9.12e-09,12;UBERON:0004456,9.12e-09,12;UBERON:0004111,1.66e-08,122;UBERON:0000033,5.22e-08,13;UBERON:0005085,5.22e-08,13;UBERON:0000025,8.16e-08,114;UBERON:0000483,1.69e-07,174;UBERON:0002257,1.98e-07,3;UBERON:0000119,2.50e-07,176 | |||
|phase1_expression=1.12104192973356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0.183546752161682,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,1.61853168687678,2.11596391708813,1.26766280701236,0,0,0,0,0,0,0,10.6800300677732,6.34527910158946,6.94072372459561,0.856952953211411,0.441737081903227,3.42974237801871,2.77951865952885,2.75765635983006,0,1.0214987046815,2.15049146558741,1.05509030184155,1.00636407962651,0,0.279182999001381,1.12552522006336,0.61119299110724,2.65165726926301,1.56608848879013,1.1183966749518,0.227178579999552,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,1.26759077799012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.878342391034642,1.46612694769419,0,0,0,0,1.04853447583376,0.457500602818626,2.1361239859187,1.04294592115366,1.27857728665165,0.20778804455956,0.811206315338788,0,0,0,0.210441855886474,0.130120442962704,1.14951052216736,0.360124259610698,2.26057226753573,2.65342346690179,4.61209393025459,3.09215691047105,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,4.32199371992995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210407459670956,0,0.147610147979602,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12385412991454,0.703270119553219,0,0,0.631016438832513,0,0.861693590931196,0,0.222798674082394,0.283076530788832,0.404810701674894,0,0.395287777946524,0.963963949265421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0.220528398054962,0,0,0,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0,0,0,0,0,0,3.95326289831947,1.38097570952153,1.71868654031819,1.89038500578056,1.37016503954128,0,1.35004500046361,1.35096360967266,0.906284817968409,1.03552062350364,0.62272408550506,0.399024873401031,0.853668028770671,0.486213434136588,0.419226325255965,0,0.888986911206461,0.206035057238894,0,0.252697211763798,0.50695859978048,0.188626341386076,0.280924522409647,0.256100609619477,0.287177344778066,0.476293691283074,0.811190281613988,0.964546102318525,0,0.147198920134397,0.342869252385415,0.532427418478012,1.1921809497366,0.145346416632329,0.282328141245992,0.507687647350059,0.548783918618318,0,0.950628796921032,0.561142271657738,0,0.591026894253381,0.409231043169689,0,0.578719832943424,0.749431733813838,0.233931608445408,0.214871054048298,0,0,0.231867835620421 | |||
|short_description=p1@ENSMUST00000052354 | |||
}} |
Latest revision as of 09:08, 6 August 2015
Short description: | p1@ENSMUST00000052354 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000052354_5end |
Coexpression cluster: | MCL_coexpression_mm9:76 |
Association with transcript: | 0bp_to_ENSMUST00000052354_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 9.10e-26 | 23 |
neuroblast (sensu Vertebrata) | 9.10e-26 | 23 |
neuron | 8.69e-19 | 33 |
neuronal stem cell | 8.69e-19 | 33 |
neuroblast | 8.69e-19 | 33 |
electrically signaling cell | 8.69e-19 | 33 |
neuron of cerebral cortex | 1.44e-15 | 6 |
electrically responsive cell | 3.16e-15 | 39 |
electrically active cell | 3.16e-15 | 39 |
ectodermal cell | 1.18e-14 | 44 |
neurectodermal cell | 1.18e-14 | 44 |
neural cell | 2.08e-13 | 43 |
hippocampal neuron | 2.36e-08 | 3 |
embryonic cell | 1.43e-07 | 70 |
granule cell | 1.61e-07 | 3 |
neuron of the ventral spinal cord | 1.98e-07 | 3 |