FFCP PHASE1:Hg19::chr9:95726432..95726439,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr9:95726432..95726439,+
|short_description=p8@FGD3
|description=CAGE_peak_8_at_FGD3_5end
|association_with_transcript=44bp_to_ENST00000468206_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=89846 | |EntrezGene=89846 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16027 | |HGNC=16027 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=44bp_to_ENST00000468206_5end | |||
|cluster_id=chr9:95726432..95726439,+ | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_8_at_FGD3_5end | |||
|id=chr9:95726432..95726439,+ | |||
|ontology_enrichment_celltype=CL:0000791!3.09e-38!18;CL:0000789!3.09e-38!18;CL:0002420!3.09e-38!18;CL:0002419!3.09e-38!18;CL:0000790!3.09e-38!18;CL:0000084!6.68e-32!25;CL:0000827!6.68e-32!25;CL:0000625!4.80e-24!11;CL:0000838!2.61e-22!52;CL:0000542!9.66e-22!53;CL:0000051!9.66e-22!53;CL:0000738!5.25e-20!140;CL:0002087!5.70e-18!119;CL:0002031!1.80e-15!124;CL:0000037!7.82e-15!172;CL:0000566!7.82e-15!172;CL:0000624!3.53e-14!6;CL:0000988!2.40e-13!182;CL:0002032!4.19e-13!165;CL:0000837!4.19e-13!165;CL:0000623!2.71e-08!3;CL:0000825!2.71e-08!3;CL:0000898!6.32e-08!3;CL:0000767!9.27e-08!3;CL:0000842!1.13e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000791;8.30e-55;18!CL:0000789;8.30e-55;18!CL:0002419;8.30e-55;18!CL:0000084;1.69e-38;25!CL:0000625;9.12e-33;11!CL:0000624;1.41e-27;6!CL:0000623;2.17e-15;3!CL:0000898;9.15e-15;3!CL:0000767;3.26e-14;3!CL:0000542;8.43e-13;53!CL:0000815;2.36e-10;2!CL:0000792;2.36e-10;2!CL:0002677;2.36e-10;2!CL:0000226;4.74e-07;3!CL:0000842;4.74e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,3.61e-55,18;CL:0000789,3.61e-55,18;CL:0002420,3.61e-55,18;CL:0002419,3.61e-55,18;CL:0000790,3.61e-55,18;CL:0000084,9.38e-39,25;CL:0000827,9.38e-39,25;CL:0000625,4.50e-33,11;CL:0000624,1.24e-27,6;CL:0000838,3.61e-25,52;CL:0000542,1.30e-24,53;CL:0000051,1.30e-24,53;CL:0000623,1.84e-15,3;CL:0000825,1.84e-15,3;CL:0000898,1.06e-14,3;CL:0000767,2.32e-14,3;CL:0000738,5.11e-14,136;CL:0002087,7.08e-13,115;CL:0000815,2.31e-10,2;CL:0000792,2.31e-10,2;CL:0002677,2.31e-10,2;CL:0000037,2.47e-10,168;CL:0002031,1.45e-09,120;CL:0000988,1.54e-09,177;CL:0002032,7.79e-09,161;CL:0000837,7.79e-09,161;CL:0000226,3.33e-07,3;CL:0000842,3.33e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;8.30e-55;18!CL:0000051;8.43e-13;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!8.95e-13!15;UBERON:0000179!8.95e-13!15;UBERON:0000463!8.95e-13!15;UBERON:0004177!1.94e-10!7;UBERON:0002193!3.76e-09!112;UBERON:0002390!4.58e-09!102;UBERON:0003061!4.58e-09!102;UBERON:0002370!4.59e-09!4;UBERON:0005058!4.59e-09!4;UBERON:0009113!4.59e-09!4;UBERON:0003295!4.59e-09!4;UBERON:0005562!4.59e-09!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.86e-07;15!UBERON:0000179;2.86e-07;15!UBERON:0000463;2.86e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.85e-07,15;UBERON:0000179,2.85e-07,15;UBERON:0000463,2.85e-07,15 | |||
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| ||
|short_description=p8@FGD3 | |||
}} | }} |
Latest revision as of 07:56, 18 September 2015
Short description: | p8@FGD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_FGD3_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 44bp_to_ENST00000468206_5end |
EntrezGene: | FGD3 |
HGNC: | 16027 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 3.61e-55 | 18 |
alpha-beta T cell | 3.61e-55 | 18 |
immature T cell | 3.61e-55 | 18 |
mature T cell | 3.61e-55 | 18 |
immature alpha-beta T cell | 3.61e-55 | 18 |
T cell | 9.38e-39 | 25 |
pro-T cell | 9.38e-39 | 25 |
CD8-positive, alpha-beta T cell | 4.50e-33 | 11 |
CD4-positive, alpha-beta T cell | 1.24e-27 | 6 |
lymphoid lineage restricted progenitor cell | 3.61e-25 | 52 |
lymphocyte | 1.30e-24 | 53 |
common lymphoid progenitor | 1.30e-24 | 53 |
natural killer cell | 1.84e-15 | 3 |
pro-NK cell | 1.84e-15 | 3 |
naive T cell | 1.06e-14 | 3 |
basophil | 2.32e-14 | 3 |
leukocyte | 5.11e-14 | 136 |
nongranular leukocyte | 7.08e-13 | 115 |
regulatory T cell | 2.31e-10 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 2.31e-10 | 2 |
naive regulatory T cell | 2.31e-10 | 2 |
hematopoietic stem cell | 2.47e-10 | 168 |
hematopoietic lineage restricted progenitor cell | 1.45e-09 | 120 |
hematopoietic cell | 1.54e-09 | 177 |
hematopoietic oligopotent progenitor cell | 7.79e-09 | 161 |
hematopoietic multipotent progenitor cell | 7.79e-09 | 161 |
single nucleate cell | 3.33e-07 | 3 |
mononuclear cell | 3.33e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 2.85e-07 | 15 |
haemolymphatic fluid | 2.85e-07 | 15 |
organism substance | 2.85e-07 | 15 |