FFCP PHASE1:Mm9::chr13:47161761..47161770,+: Difference between revisions
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{{FFCP|EntrezGene=218214|HGNC=|MCL_coexpression_id=132|UniProt=Q8CIG3|association_with_transcript=-54bp_to_uc011yyy.1_5end|description=CAGE_peak_8_at_Kdm1b_5end|id=chr13:47161761..47161770,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000162!7.62e-10!3;UBERON:0001353!7.62e-10!3;UBERON:0000163!7.62e-10!3;UBERON:0006866!7.62e-10!3;UBERON:0001046!7.62e-10!3;UBERON:0000164!7.62e-10!3;UBERON:0000931!7.62e-10!3;UBERON:0005409!3.55e-08!59;UBERON:0000945!3.77e-08!16;UBERON:0010039!3.77e-08!16;UBERON:0000474!8.57e-08!9|ontology_enrichment_uberon_v019_2=UBERON:0001255,2.87e-30,1;UBERON:0001556,2.87e-30,1;UBERON:0000162,4.56e-11,3;UBERON:0001353,4.56e-11,3;UBERON:0000163,4.56e-11,3;UBERON:0006866,4.56e-11,3;UBERON:0001046,4.56e-11,3;UBERON:0000164,4.56e-11,3;UBERON:0000931,4.56e-11,3;UBERON:0000161,3.64e-07,5;UBERON:0004122,3.64e-07,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.444756087689741,0,0,0.164698954724011,0.754005626400808,0.596869416123452,1.16978452271472,0.898819408654221,0,0.995706366271836,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0.441056796109924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0.406638934253697,0.216010681643603,0.209088296014469,0,0.404593039154462,1.65306911450672,0,0.777689839750757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,3.28422309854724,0.563047426353546,0.36630324853453,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0.0941093804153306,0,0,0,0,0,0,0,0.409231043169689,0,0.192906610981141,0,0,0,0,0,0|short_description=p8@Kdm1b}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=218214 | |||
|HGNC= | |||
|MCL_coexpression_id=132 | |||
|TSSclassifier=NA | |||
|UniProt=Q8CIG3 | |||
|association_with_transcript=-54bp_to_uc011yyy.1_5end | |||
|cluster_id=chr13:47161761..47161770,+ | |||
|description=CAGE_peak_8_at_Kdm1b_5end | |||
|id=chr13:47161761..47161770,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000162!7.62e-10!3;UBERON:0001353!7.62e-10!3;UBERON:0000163!7.62e-10!3;UBERON:0006866!7.62e-10!3;UBERON:0001046!7.62e-10!3;UBERON:0000164!7.62e-10!3;UBERON:0000931!7.62e-10!3;UBERON:0005409!3.55e-08!59;UBERON:0000945!3.77e-08!16;UBERON:0010039!3.77e-08!16;UBERON:0000474!8.57e-08!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001255,2.87e-30,1;UBERON:0001556,2.87e-30,1;UBERON:0000162,4.56e-11,3;UBERON:0001353,4.56e-11,3;UBERON:0000163,4.56e-11,3;UBERON:0006866,4.56e-11,3;UBERON:0001046,4.56e-11,3;UBERON:0000164,4.56e-11,3;UBERON:0000931,4.56e-11,3;UBERON:0000161,3.64e-07,5;UBERON:0004122,3.64e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.444756087689741,0,0,0.164698954724011,0.754005626400808,0.596869416123452,1.16978452271472,0.898819408654221,0,0.995706366271836,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0.441056796109924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0.406638934253697,0.216010681643603,0.209088296014469,0,0.404593039154462,1.65306911450672,0,0.777689839750757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,3.28422309854724,0.563047426353546,0.36630324853453,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0.0941093804153306,0,0,0,0,0,0,0,0.409231043169689,0,0.192906610981141,0,0,0,0,0,0 | |||
|short_description=p8@Kdm1b | |||
}} |
Latest revision as of 16:13, 1 October 2015
Short description: | p8@Kdm1b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Kdm1b_5end |
Coexpression cluster: | MCL_coexpression_mm9:132 |
Association with transcript: | -54bp_to_uc011yyy.1_5end |
EntrezGene: | Kdm1b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
urinary bladder | 2.87e-30 | 1 |
lower urinary tract | 2.87e-30 | 1 |
cloaca | 4.56e-11 | 3 |
anal region | 4.56e-11 | 3 |
embryonic cloaca | 4.56e-11 | 3 |
terminal part of digestive tract | 4.56e-11 | 3 |
hindgut | 4.56e-11 | 3 |
primitive urogenital sinus | 4.56e-11 | 3 |
proctodeum | 4.56e-11 | 3 |
orifice | 3.64e-07 | 5 |
genitourinary system | 3.64e-07 | 5 |