FFCP PHASE1:Hg19::chr3:42003479..42003612,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54986 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15784 | |||
|TSSclassifier=strong | |||
|UniProt=C9JVZ3 | |||
|association_with_transcript=0bp_to_ENST00000420927,ENST00000431379,ENST00000453224,ENST00000459802,ENST00000460978_5end | |||
|cluster_id=chr3:42003479..42003612,- | |||
|description=CAGE_peak_1_at_ULK4_5end | |||
|id=chr3:42003479..42003612,- | |||
|ontology_enrichment_celltype=CL:0000738!5.22e-25!140;CL:0000037!8.33e-23!172;CL:0000566!8.33e-23!172;CL:0002032!5.39e-20!165;CL:0000837!5.39e-20!165;CL:0000988!2.59e-19!182;CL:0002031!9.77e-18!124;CL:0002087!3.65e-17!119;CL:0000766!9.29e-15!76;CL:0000763!1.26e-13!112;CL:0000049!1.26e-13!112;CL:0000557!4.48e-13!71;CL:0000839!4.13e-11!70;CL:0002009!5.40e-11!65;CL:0002194!2.61e-10!63;CL:0000576!2.61e-10!63;CL:0000040!2.61e-10!63;CL:0000559!2.61e-10!63;CL:0002057!3.52e-09!42;CL:0000791!4.36e-09!18;CL:0000789!4.36e-09!18;CL:0002420!4.36e-09!18;CL:0002419!4.36e-09!18;CL:0000790!4.36e-09!18;CL:0000860!7.73e-09!45;CL:0000084!4.92e-07!25;CL:0000827!4.92e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000791;3.35e-09;18!CL:0000789;3.35e-09;18!CL:0002419;3.35e-09;18!CL:0000084;3.29e-07;25!CL:0000576;6.27e-07;48!CL:0000766;7.61e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.47e-25,136;CL:0000037,5.69e-23,168;CL:0002032,3.85e-20,161;CL:0000837,3.85e-20,161;CL:0000988,6.77e-20,177;CL:0002031,5.56e-18,120;CL:0002087,2.05e-17,115;CL:0000766,3.53e-15,72;CL:0000763,8.31e-14,108;CL:0000049,8.31e-14,108;CL:0000557,1.82e-13,67;CL:0000839,2.01e-11,66;CL:0002009,2.44e-11,61;CL:0002194,1.23e-10,59;CL:0000576,1.23e-10,59;CL:0000040,1.23e-10,59;CL:0000559,1.23e-10,59;CL:0000473,9.33e-10,48;CL:0000234,9.33e-10,48;CL:0000860,3.52e-09,42;CL:0002057,3.52e-09,42;CL:0000791,4.36e-09,18;CL:0000789,4.36e-09,18;CL:0002420,4.36e-09,18;CL:0002419,4.36e-09,18;CL:0000790,4.36e-09,18;CL:0000084,4.92e-07,25;CL:0000827,4.92e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000790;3.35e-09;18!CL:0002057;7.63e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.43e-13!102;UBERON:0003061!3.43e-13!102;UBERON:0002193!5.41e-13!112;UBERON:0002371!2.19e-10!80;UBERON:0001474!1.94e-09!86;UBERON:0007023!2.88e-09!115;UBERON:0002405!4.26e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.02e-13,98;UBERON:0003061,2.02e-13,98;UBERON:0002193,3.41e-13,108;UBERON:0002405,4.00e-11,93;UBERON:0002371,1.27e-10,76;UBERON:0001474,1.28e-09,82;UBERON:0007023,4.23e-09,114;UBERON:0004765,4.15e-07,90 | |||
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| |||
|short_description=p1@ULK4 | |||
}} |
Latest revision as of 05:34, 18 September 2015
Short description: | p1@ULK4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ULK4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000420927, ENST00000431379, ENST00000453224, ENST00000459802, ENST00000460978_5end |
EntrezGene: | ULK4 |
HGNC: | 15784 |
UniProt: | C9JVZ3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 2.47e-25 | 136 |
hematopoietic stem cell | 5.69e-23 | 168 |
hematopoietic oligopotent progenitor cell | 3.85e-20 | 161 |
hematopoietic multipotent progenitor cell | 3.85e-20 | 161 |
hematopoietic cell | 6.77e-20 | 177 |
hematopoietic lineage restricted progenitor cell | 5.56e-18 | 120 |
nongranular leukocyte | 2.05e-17 | 115 |
myeloid leukocyte | 3.53e-15 | 72 |
myeloid cell | 8.31e-14 | 108 |
common myeloid progenitor | 8.31e-14 | 108 |
granulocyte monocyte progenitor cell | 1.82e-13 | 67 |
myeloid lineage restricted progenitor cell | 2.01e-11 | 66 |
macrophage dendritic cell progenitor | 2.44e-11 | 61 |
monopoietic cell | 1.23e-10 | 59 |
monocyte | 1.23e-10 | 59 |
monoblast | 1.23e-10 | 59 |
promonocyte | 1.23e-10 | 59 |
defensive cell | 9.33e-10 | 48 |
phagocyte | 9.33e-10 | 48 |
classical monocyte | 3.52e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.52e-09 | 42 |
mature alpha-beta T cell | 4.36e-09 | 18 |
alpha-beta T cell | 4.36e-09 | 18 |
immature T cell | 4.36e-09 | 18 |
mature T cell | 4.36e-09 | 18 |
immature alpha-beta T cell | 4.36e-09 | 18 |
T cell | 4.92e-07 | 25 |
pro-T cell | 4.92e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.02e-13 | 98 |
blood island | 2.02e-13 | 98 |
hemolymphoid system | 3.41e-13 | 108 |
immune system | 4.00e-11 | 93 |
bone marrow | 1.27e-10 | 76 |
bone element | 1.28e-09 | 82 |
adult organism | 4.23e-09 | 114 |
skeletal element | 4.15e-07 | 90 |