FFCP PHASE1:Mm9::chr13:120198251..120198272,-: Difference between revisions
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{{FFCP|EntrezGene=18115|HGNC=|UniProt=Q8C1W8,Q8C9V5,Q8C337|association_with_transcript=-306bp_to_NR_003544,uc007ryw.1,uc007ryx.1,uc007ryz.1,uc007rza.1,uc007rzb.1_5end|description=CAGE_peak_2_at_Nnt_5end|id=chr13:120198251..120198272,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004535!3.91e-13!23;UBERON:0001009!3.91e-13!23;UBERON:0007100!1.09e-12!18;UBERON:0000948!1.09e-12!18;UBERON:0005498!1.09e-12!18;UBERON:0004140!1.09e-12!18;UBERON:0009881!1.09e-12!18;UBERON:0004141!1.09e-12!18;UBERON:0003084!1.09e-12!18;UBERON:0007005!1.09e-12!18;UBERON:0004139!1.09e-12!18;UBERON:0004291!1.09e-12!18;UBERON:0004872!1.61e-08!33;UBERON:0003103!2.45e-08!43|ontology_enrichment_uberon_v019_2=UBERON:0007100,4.61e-15,18;UBERON:0000948,4.61e-15,18;UBERON:0005498,4.61e-15,18;UBERON:0004140,4.61e-15,18;UBERON:0009881,4.61e-15,18;UBERON:0004141,4.61e-15,18;UBERON:0003084,4.61e-15,18;UBERON:0007005,4.61e-15,18;UBERON:0004139,4.61e-15,18;UBERON:0004291,4.61e-15,18;UBERON:0004535,8.56e-15,23;UBERON:0001009,8.56e-15,23;UBERON:0004872,6.58e-10,33;UBERON:0003103,6.09e-08,43;UBERON:0003914,9.82e-07,47|phase1_expression=2.08193501236232,0.348975407639361,0,0,0,0.16787927191189,0.467225281191051,0,0,0,0,0.159544317990673,0,0,0.333109761815663,0,0,0,0,0,3.06155844543851,0.0992909512008853,0,0.319984845586813,0.22940928106717,0,0.430761996159075,0.430942465371778,0.760093677825496,0.756090389279792,0.221730510655305,0,0,0,0.577703239502549,0.831173226792462,1.22501613757421,0,0,0,0,0,0,4.53228544712078,3.64956952390252,3.30384153891027,0,0.218025156380447,1.09843091367236,1.36100929351998,1.67983705950435,1.43752564364972,0.167782606057736,0,0,2.57259436035947,4.01146815914259,3.6097046459421,0,1.05798195854407,0,0.338844532069132,0,2.2497492932035,0,1.4209602298922,0.299600110518405,0,0.518448061542388,0.135005938331691,0.630974884054146,0.571301968807607,0.883474163806454,0,0.0958454710182364,0,0,0.127687338085188,0.153606533256243,0.131886287730194,0.0914876436024097,0,0,0.56276261003168,0.45839474333043,0.294628585473668,0.569486723196412,0.186399445825301,0.37863096666592,0.906858721281426,0.289864488701678,0,0,3.77792234146472,0,0,0.983110940922263,5.62420064507591,1.81850203222008,1.7666978725517,2.11265129665021,3.84979432242953,0,0,0.865964164044856,1.26679932737549,0,1.1418387971906,0.258937883647172,1.1875371125186,1.90833859442749,0.608930956624282,2.07553947530453,2.41156224884196,2.23418543557839,1.88499886994513,0.494389935468748,0.86759614151947,0,2.75003644910596,1.10420759230197,0.484875253135222,0,0.292780797011547,0,0.255457055208591,0.239630249011841,0,0.508280908292259,0.149790639404823,0,0.125654352112864,0.173824320192276,0,0,0,2.54598409625791,0.248813941220186,0.758168275301024,0.210441855886474,2.08192708740326,0.459804208866946,1.62055916824814,1.65775299619287,1.02054748726992,0.768682321709099,0.937017245597288,0.258703370739016,2.37124792226126,2.64748512234947,1.40760899331159,0.876782929710299,0.834141747676794,2.43776516565517,1.85203922767149,2.7864797354589,0,0,0.852490498186778,3.10688658803253,3.04883877975425,3.6012412292203,3.31442629819294,5.1158700254325,6.32495162838251,4.88321283975857,9.65784245038629,6.18856314545998,4.60767579757745,6.895033491322,4.70199095365963,4.38599962275997,5.04965265169416,5.09984391289413,0.210289948564127,0,0.330418782983798,0.528901133327089,2.55945900642281,3.71578674976702,1.80414445850931,1.61346819698674,2.66853652613844,1.33157938278791,0.474529061544512,1.4822905925161,2.5133520880027,1.79060824837036,1.16978452271472,0,1.51296634912286,0.398282546508734,1.70701110857774,1.94222471436539,0,2.03651327845314,0.775809948670503,2.10407459670956,2.02356918797623,2.06654207171443,3.1399745568275,2.34454611451421,0,0.500535317148282,0.786235980452812,0.449724224769707,0,0.72353147925725,1.01850340712568,0,0.324270453550071,2.19649130550465,2.87536413054709,0.744281895337007,2.80833905803104,1.51547326768267,0.717589654087649,0.964887042726734,0.184753190166605,1.51593129416388,1.62964976442026,1.86719594352707,2.34690248288502,2.34508760418542,1.6663054862021,2.14647012643579,1.7339865851681,0.8858587585951,1.59454768657487,1.63863314715738,1.20879487306127,0.433947175744535,0,0.54390568381871,0.491764273019036,2.20749397043786,0,0.234423373184406,1.63934945376675,0.252470927204373,2.52406575533005,1.56175497718655,1.50796378412959,0.477937595905104,1.11399337041197,1.41538265394416,1.21443210502468,1.16902343164525,1.18586333383957,0,0.851640511249612,2.13678724400706,2.93196526836437,1.15479086080775,0,2.6705869977048,0.302323556964751,1.32023555829129,0.885905678642318,0.307435147943927,1.80899805217755,2.18120237686503,2.85197902707777,1.8962205476149,0,0,0,1.62054984628179,1.03486947026204,1.28602221018955,1.24138163549592,2.31879462882692,1.31639216481697,0,0.469343416127421,0.21183207086382,0,0.32977250588296,1.45317984026315,0.8443809489941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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=18115 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=Q8C1W8,Q8C9V5,Q8C337 | |||
|association_with_transcript=-306bp_to_NR_003544,uc007ryw.1,uc007ryx.1,uc007ryz.1,uc007rza.1,uc007rzb.1_5end | |||
|cluster_id=chr13:120198251..120198272,- | |||
|description=CAGE_peak_2_at_Nnt_5end | |||
|id=chr13:120198251..120198272,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!3.91e-13!23;UBERON:0001009!3.91e-13!23;UBERON:0007100!1.09e-12!18;UBERON:0000948!1.09e-12!18;UBERON:0005498!1.09e-12!18;UBERON:0004140!1.09e-12!18;UBERON:0009881!1.09e-12!18;UBERON:0004141!1.09e-12!18;UBERON:0003084!1.09e-12!18;UBERON:0007005!1.09e-12!18;UBERON:0004139!1.09e-12!18;UBERON:0004291!1.09e-12!18;UBERON:0004872!1.61e-08!33;UBERON:0003103!2.45e-08!43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,4.61e-15,18;UBERON:0000948,4.61e-15,18;UBERON:0005498,4.61e-15,18;UBERON:0004140,4.61e-15,18;UBERON:0009881,4.61e-15,18;UBERON:0004141,4.61e-15,18;UBERON:0003084,4.61e-15,18;UBERON:0007005,4.61e-15,18;UBERON:0004139,4.61e-15,18;UBERON:0004291,4.61e-15,18;UBERON:0004535,8.56e-15,23;UBERON:0001009,8.56e-15,23;UBERON:0004872,6.58e-10,33;UBERON:0003103,6.09e-08,43;UBERON:0003914,9.82e-07,47 | |||
|phase1_expression=2.08193501236232,0.348975407639361,0,0,0,0.16787927191189,0.467225281191051,0,0,0,0,0.159544317990673,0,0,0.333109761815663,0,0,0,0,0,3.06155844543851,0.0992909512008853,0,0.319984845586813,0.22940928106717,0,0.430761996159075,0.430942465371778,0.760093677825496,0.756090389279792,0.221730510655305,0,0,0,0.577703239502549,0.831173226792462,1.22501613757421,0,0,0,0,0,0,4.53228544712078,3.64956952390252,3.30384153891027,0,0.218025156380447,1.09843091367236,1.36100929351998,1.67983705950435,1.43752564364972,0.167782606057736,0,0,2.57259436035947,4.01146815914259,3.6097046459421,0,1.05798195854407,0,0.338844532069132,0,2.2497492932035,0,1.4209602298922,0.299600110518405,0,0.518448061542388,0.135005938331691,0.630974884054146,0.571301968807607,0.883474163806454,0,0.0958454710182364,0,0,0.127687338085188,0.153606533256243,0.131886287730194,0.0914876436024097,0,0,0.56276261003168,0.45839474333043,0.294628585473668,0.569486723196412,0.186399445825301,0.37863096666592,0.906858721281426,0.289864488701678,0,0,3.77792234146472,0,0,0.983110940922263,5.62420064507591,1.81850203222008,1.7666978725517,2.11265129665021,3.84979432242953,0,0,0.865964164044856,1.26679932737549,0,1.1418387971906,0.258937883647172,1.1875371125186,1.90833859442749,0.608930956624282,2.07553947530453,2.41156224884196,2.23418543557839,1.88499886994513,0.494389935468748,0.86759614151947,0,2.75003644910596,1.10420759230197,0.484875253135222,0,0.292780797011547,0,0.255457055208591,0.239630249011841,0,0.508280908292259,0.149790639404823,0,0.125654352112864,0.173824320192276,0,0,0,2.54598409625791,0.248813941220186,0.758168275301024,0.210441855886474,2.08192708740326,0.459804208866946,1.62055916824814,1.65775299619287,1.02054748726992,0.768682321709099,0.937017245597288,0.258703370739016,2.37124792226126,2.64748512234947,1.40760899331159,0.876782929710299,0.834141747676794,2.43776516565517,1.85203922767149,2.7864797354589,0,0,0.852490498186778,3.10688658803253,3.04883877975425,3.6012412292203,3.31442629819294,5.1158700254325,6.32495162838251,4.88321283975857,9.65784245038629,6.18856314545998,4.60767579757745,6.895033491322,4.70199095365963,4.38599962275997,5.04965265169416,5.09984391289413,0.210289948564127,0,0.330418782983798,0.528901133327089,2.55945900642281,3.71578674976702,1.80414445850931,1.61346819698674,2.66853652613844,1.33157938278791,0.474529061544512,1.4822905925161,2.5133520880027,1.79060824837036,1.16978452271472,0,1.51296634912286,0.398282546508734,1.70701110857774,1.94222471436539,0,2.03651327845314,0.775809948670503,2.10407459670956,2.02356918797623,2.06654207171443,3.1399745568275,2.34454611451421,0,0.500535317148282,0.786235980452812,0.449724224769707,0,0.72353147925725,1.01850340712568,0,0.324270453550071,2.19649130550465,2.87536413054709,0.744281895337007,2.80833905803104,1.51547326768267,0.717589654087649,0.964887042726734,0.184753190166605,1.51593129416388,1.62964976442026,1.86719594352707,2.34690248288502,2.34508760418542,1.6663054862021,2.14647012643579,1.7339865851681,0.8858587585951,1.59454768657487,1.63863314715738,1.20879487306127,0.433947175744535,0,0.54390568381871,0.491764273019036,2.20749397043786,0,0.234423373184406,1.63934945376675,0.252470927204373,2.52406575533005,1.56175497718655,1.50796378412959,0.477937595905104,1.11399337041197,1.41538265394416,1.21443210502468,1.16902343164525,1.18586333383957,0,0.851640511249612,2.13678724400706,2.93196526836437,1.15479086080775,0,2.6705869977048,0.302323556964751,1.32023555829129,0.885905678642318,0.307435147943927,1.80899805217755,2.18120237686503,2.85197902707777,1.8962205476149,0,0,0,1.62054984628179,1.03486947026204,1.28602221018955,1.24138163549592,2.31879462882692,1.31639216481697,0,0.469343416127421,0.21183207086382,0,0.32977250588296,1.45317984026315,0.844380948994182,0.477489376012546,0.164140899745061,2.04036585640896,0,0,2.06386867963222,1.48155621895769,0.188368457004691,0.136694227721025,0,0,0.419854356970974,0.276399947608848,0,2.21435195506795,1.01659733563424,1.83609079397062,2.09088296014469,2.40198820120795,1.88810084938749,0.743881101528023,1.83229159388821,0.518459893167171,1.24267862617385,0.56369293868419,3.43888055901151,3.30916980914195,2.52786544847262,3.7456348808542,2.02747350588934,3.52071715937262,1.17183946359555,0.734015410979976,0.724752362478018,0,0,1.41907650703115,0.410843828659309,0.129920822977795,0,0.596044064343795,0,0.147689527174577,0.403865799792591,0,0.100826185136841,0.0974578807397524,0.192423683280659,0.116876902181569,0.453460767230423,3.10780334723691,2.15313255862742,0.503653849092235,0.965947970160952,1.50145980360946,1.09890974560359,0.214368379079066,1.00314420807073,0,0,0,0,0,0.755393897389701,0,1.35096360967266,0,0,2.17953429926771,0.798049746802062,0.682934423016537,1.94485373654635,0.838452650511929,0.551530525350042,0.666740183404846,1.23621034343337,0.320919209591815,0.758091635291392,2.02783439912192,0.943131706930381,1.96647165686753,1.28050304809739,1.32101578597911,1.42888107384922,1.85414921511769,1.54327376370964,3.29668720642645,1.47198920134397,0.685738504770831,0.887379030796687,0.953744759789284,1.0174249164263,1.50575008664529,2.36920902096694,0.914639864363863,2.10455769150274,1.22223702461276,2.24456908663095,0.355905054372522,0.886540341380071,1.63692417267876,0.929621047115796,0.964533054905707,0.499621155875892,1.87145286756327,0.644613162144895,1.14772999241306,1.10295709559758,0.695603506861264 | |||
|short_description=p2@Nnt | |||
}} |
Latest revision as of 04:05, 27 September 2015
Short description: | p2@Nnt |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Nnt_5end |
Coexpression cluster: | NA |
Association with transcript: | -306bp_to_NR_003544, uc007ryw.1, uc007ryx.1, uc007ryz.1, uc007rza.1, uc007rzb.1_5end |
EntrezGene: | Nnt |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 4.61e-15 | 18 |
heart | 4.61e-15 | 18 |
primitive heart tube | 4.61e-15 | 18 |
primary heart field | 4.61e-15 | 18 |
anterior lateral plate mesoderm | 4.61e-15 | 18 |
heart tube | 4.61e-15 | 18 |
heart primordium | 4.61e-15 | 18 |
cardiac mesoderm | 4.61e-15 | 18 |
cardiogenic plate | 4.61e-15 | 18 |
heart rudiment | 4.61e-15 | 18 |
cardiovascular system | 8.56e-15 | 23 |
circulatory system | 8.56e-15 | 23 |
splanchnic layer of lateral plate mesoderm | 6.58e-10 | 33 |
compound organ | 6.09e-08 | 43 |
epithelial tube | 9.82e-07 | 47 |