FFCP PHASE1:Hg19::chr3:197024906..197024953,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1739 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2900 | |||
|TSSclassifier=strong | |||
|UniProt=E7EQD7 | |||
|association_with_transcript=32bp_to_ENST00000392381,ENST00000392382,uc003fxp.2_5end | |||
|cluster_id=chr3:197024906..197024953,- | |||
|description=CAGE_peak_3_at_DLG1_5end | |||
|id=chr3:197024906..197024953,- | |||
|ontology_enrichment_celltype=CL:0000542!1.09e-14!53;CL:0000051!1.09e-14!53;CL:0000838!2.47e-14!52;CL:0000791!4.41e-08!18;CL:0000789!4.41e-08!18;CL:0002420!4.41e-08!18;CL:0002419!4.41e-08!18;CL:0000790!4.41e-08!18;CL:0000945!2.92e-07!24;CL:0000826!2.92e-07!24;CL:0000084!5.10e-07!25;CL:0000827!5.10e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000542;1.73e-08;53!CL:0000791;2.18e-08;18!CL:0000789;2.18e-08;18!CL:0002419;2.18e-08;18!CL:0000084;2.21e-07;25!CL:0000945;9.78e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,1.01e-14,53;CL:0000051,1.01e-14,53;CL:0000838,2.28e-14,52;CL:0000791,4.23e-08,18;CL:0000789,4.23e-08,18;CL:0002420,4.23e-08,18;CL:0002419,4.23e-08,18;CL:0000790,4.23e-08,18;CL:0000945,2.82e-07,24;CL:0000826,2.82e-07,24;CL:0000084,4.92e-07,25;CL:0000827,4.92e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000051;1.73e-08;53!CL:0000790;2.18e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.48e-13!115;UBERON:0001049!2.72e-07!57;UBERON:0005068!2.72e-07!57;UBERON:0006241!2.72e-07!57;UBERON:0007135!2.72e-07!57;UBERON:0002616!9.16e-07!59 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.68e-13,114;UBERON:0001049,3.05e-07,56;UBERON:0005068,3.05e-07,56;UBERON:0006241,3.05e-07,56;UBERON:0007135,3.05e-07,56 | |||
|phase1_expression=1.63510541343501,0.856402095563933,0.986680828671798,2.00146596706261,0.893922188854576,0,0,1.89515962028049,1.56711376919903,0.245733936501509,0.697801167972428,1.31064823278103,0,1.11389717664042,1.98838425436749,2.01697543935533,1.80808358407193,1.46062018077475,0.975865597581014,1.72369481307503,2.44800829493104,0.940364164434263,4.29353980696585,6.29622355335267,6.77930253811935,4.27915072188527,4.26923065139718,4.64393609750708,2.36018566109342,5.75744097145819,1.85779347979291,0.919421224478927,1.50602959389125,1.10926203050036,4.8029664359787,4.54941543959749,4.9912074686924,2.21598163412751,3.20871115952227,3.47217393145363,1.56740831967947,3.88672399222775,1.80302897343931,0.581592955118259,0.755751887377619,1.69808842831471,0.929716147622738,2.05583944010913,0,1.43846196161075,1.0246428261164,0.709446689665756,1.37898272294647,1.93645405075148,1.35426486594342,0.564727018627814,0.272906150057846,0.674170453335254,0.918251677112708,0.641858054152187,0.639337125799041,0,0.598390972864896,2.55734850319616,0,1.70215567407342,1.24564449799115,0.75374599577023,1.5644487552606,1.08594422352558,3.02699751316684,1.47311054395026,1.26584954976354,0.422510572623884,0.212604299965044,1.46761051855863,1.46027220490444,0.600707571366025,1.44653028027372,0.855038231223746,0.99458338599545,0.547992461293902,7.03984977845291,7.64594055766984,4.44754626931777,5.12076267079809,6.00593980554019,5.17277195959035,5.2883589822789,1.90810750907073,6.83055562931338,7.6340834618222,11.8504700718821,3.96513985737078,8.40762844472304,4.74091352595139,12.3927155171715,7.8602152549833,5.96244347098577,5.51715434789238,4.88883399950386,5.6813736688168,7.79306913631645,3.00808233589969,5.30290633454707,4.2091439970888,5.41607727530031,2.68991771423918,2.08094956095805,2.30213066445147,1.10540007114339,1.73881851441031,4.74517002118593,5.88589821797369,3.1360657141493,1.69964014046349,2.29932296161153,4.12352934579156,4.30133476433155,5.41561204350964,5.20866763085135,5.70271226669025,6.625305239422,6.91127700233859,7.49584359314075,7.34009481336452,3.28451198768419,8.87069670188823,7.2208852861547,11.1514790989755,2.43806866313962,2.01210257911091,1.66221330396589,5.78302643815306,3.00802746381534,2.17269778441236,3.1811437882044,3.40644409211845,4.63220604103932,5.32150553910154,3.95256535619067,4.06035134042909,0.728590576585084,0,1.9472843619281,0.870648686496336,1.86141144726411,4.29283123749616,5.14795419702115,6.68623502393217,2.38514888840046,0.860234595106124,0.694281003215189,2.82653970962005,2.93649605346934,1.10047216776027,2.08994966536811,3.10100111003195,5.69226020298736,4.35136796594071,2.41697590265488,3.80136052859256,2.68468263302986,1.10298924103761,3.24056779152704,4.46498641420399,4.04152870727106,4.39184773884957,1.53316637465883,0.949265659568129,2.93122790288652,1.31780417436063,3.87780264148325,3.05265836499774,1.98788780678127,2.78587125662075,2.91300197789081,4.01571269048339,3.54668382198357,1.12135520028461,0,2.71334303258876,1.8672662123986,3.23305612967251,2.12500474047496,2.4217188423189,2.30470369792,0.468642863667593,1.24864030732128,1.1409436430889,1.19558944441441,2.3486899728753,1.61872944368132,1.82586048712923,1.83738754129404,2.08818339430006,2.16984140469107,1.18800285728205,4.20353779773547,2.73048408581408,0.718618141816238,1.5150250255866,2.37725187756732,3.04770527032601,3.07284334616587,3.37136575378922,2.85452311922534,1.47461838108027,5.38168907066586,1.49490172172997,2.33125091275518,3.00091096084402,2.98852334791473,3.60696756063881,1.67505170698431,3.71307930930786,2.53336213419116,3.5340728394176,1.47279837827679,2.42469085228218,2.4850671476163,1.61203357164224,1.86516651541536,2.31913023795956,3.00020732649918,2.86804595389004,5.48881677583179,4.24095258628753,2.90484857173796,3.42081481550722,2.52320850875628,3.6497735907583,3.12899064659632,2.57296375277154,0,1.85747171212792,1.44375896333917,1.18306800039844,1.34867752062481,1.44606617930089,1.65440959098591,0.871517776369625,0.71181185733329,0.808987848960987,0.98110732562673,0.38474715694639,1.4763109092493,1.40241773803446,0.8231480226628,0,2.53510069643662,0.982827216677626,2.95394953340702,4.85609409356116,2.82873408649161,2.23038153388083,1.42675371031213,1.1240175325762,2.21163739305588,1.85176890317059,0.651616610620649,1.03993478527958,4.3299402607582,2.31860809950154,2.93521735589554,1.58803092537181,1.38895653772983,2.66355813128438,5.53143078571493,1.71697232418975,0.738651018262192,0.702012795417713,1.63494278517601,1.87467667973554,1.84780341018745,1.98485136139341,1.16426079513703,1.16253575405585,2.30029607499127,3.4486426652716,6.60363255099195,14.0983118567725,14.7002352485301,13.7604252434754,2.22242630022592,1.52795370223311,1.17217447210047,0,1.64523988325318,1.8020583470635,2.85826432630578,1.56983518083505,3.92364061949952,1.6134422880609,2.06834745212444,7.15312891703765,0.845302752556,4.5209479819428,2.08014873822732,0.771622122786426,0,0.799266537048298,2.00169191121407,2.17048642156577,0,1.62868092146868,2.84313558994037,0,2.41151501647669,0.871533458600294,2.69927076191554,1.2162378064119,1.00451418286425,0,2.63587341040741,3.44585807502342,0,2.02693829334611,1.43833425785268,3.40215830155802,3.02629888782524,7.09310736726938,5.39068937148793,9.24069861214188,2.7950408664471,0,1.54657762555539,1.84267891867784,2.55175500661265,0.749007023947182,2.99161459204025,1.24324654030811,4.04881922673162,1.00034104211935,3.7977103317963,1.03985430765404,1.24900292158013,1.57702415033935,2.57711112983969,2.10662269809403,0,2.0694614258501,1.99267679560631,1.84369168541703,1.39013783148933,2.34961388955289,0.343143423810856,8.06395301879261,3.23571301227925,7.4709290462411,0,0,2.72151263996712,0.744323423456331,3.06923946576125,1.12264037773229,1.53766979106841,0.511707249066704,2.0911009748669,1.48418066444991,0.771048469013278,0.887808626565635,1.56041596426237,2.59627214591811,1.27831416305955,3.62578348774867,2.80709058424599,1.93370076765382,1.49258782613989,2.54927635209404,1.57349297951309,0.902399225814824,1.46329140498388,0.784349769176855,2.92278449306521,1.79437769117889,0,2.2112181685947,4.75015015424707,3.08454505380579,1.35473218771926,1.00337954770971,1.78413391131527,0.831076008928724,0.671624264166535,1.09629938322967,1.8300481571743,1.79515087581472,3.28014645699706,1.62689197332152,3.29731237272711,3.11336180382368,3.30037999682352,1.14853107599234,3.25030123018261,0,3.19013370364003,2.61882649094895,2.91656981979646,2.20538515975249,2.0409846524972,2.46528379654188,3.32383846922794,2.1367688555217,1.81813406897076,2.88285101047659,8.0396008871588,2.73126008309985,2.32422774648643,3.77774816196768,2.0911118104818,0,1.59691809095107,3.47973196830029,1.29726953372744,2.00374841438788,2.60510858551767,6.32758849437452,4.00323407240032,0,2.56763392820352,0.95460974377781,0,1.43897966066652,2.47083326762449,3.41655966802491,1.41527737101321,0,2.10629228119491,0.48763373908959,1.21856744815642,1.05650146756755,2.32049849393576,3.53513579884282,4.52032466480971,0.551365343546124,0.66343897524122,0.876901770507525,0,1.31178950409327,0.608731130888112,0.92947049429925,0.845086807596724,2.00775893085672,2.84922218938051,0.7133421029625,1.06428319221179,2.9555068941673,2.96365403663912,0.379473173765715,2.0996083214699,1.53955380360819,0.670302275535787,0,3.01260162485693,1.29151611801369,1.68471475667626,0.886860307073351,3.44585100310439,4.05958087385735,1.52927441428475,2.84823593587081,3.09701308095126,5.75907182320672,2.59389324477087,4.86028293514303,2.37937552888281,2.7774258493143,0,6.37104561550682,5.20248890352012,2.74111504655245,7.39875170823507,4.46393563640703,2.79411120005943,4.5961288831768,5.71518673354484,2.59697552219644,4.49275484981534,2.51058146936511,0.783399478865116,7.51903431270201,1.69291777801603,2.08764497634809,1.41259795033733,8.94277099149685,2.06103206853459,1.53620382154229,1.3420566473545,2.0021897005429,1.36771666781428,3.06246791284767,7.38524393686274,1.35227839237992,5.32915148796512,9.86909035614947,1.8714054040822,3.80921266106924,8.37387600071643,5.79505598242887,1.70481688083848,1.43246690842614,2.67268212749375,2.76444631889309,3.97659059106519,4.78276015795743,3.11664374064136,1.31843099381408,6.3337622438398,4.78195171802567,7.45966571934099,3.27512572210559,6.03385226762713,5.6619010512092,0.311039587661807,5.39210106883961,1.43216939740487,0.511572370226872,6.41182136640068,4.7896618469388,4.44547960578548,0.969332746095218,3.6179558283122,0,3.64598865519327,3.58585999984402,2.89999830173917,7.28278069027198,1.27126825146383,2.36387681767936,1.72371686620732,0.874813840149763,1.21537496453305,5.31444831488303,5.06505042226713,4.5774520895125,4.86548743697388,1.47773809476774,1.75508317723178,1.63407695278485,4.3221360726367,8.61842895242527,2.96249345202203,0.69169171316418,2.69272933229316,1.4124158349861,2.87101043758728,2.56473261525214,3.73124343213044,1.02193298195737,2.5116841023204,5.81740886650547,1.80476528493745,4.31337575499027,3.5242533264927,1.13852239634511,5.08597052737212,2.3209787098083,0.816164040795739,2.12029607150911,5.84249327303646,2.98578579323551,5.74974169271705,3.66618086960175,1.48260564340311,1.97702302314405,1.14864144456001,8.55994388854598,3.21031058919516,4.91955336023212,3.83155057352899,3.13063390291344,2.42780379534093,5.12959723704208,4.83962864194656,3.67287313956588,4.61262031287962,0.60129367765797,0.414752765588989,1.99396161812156,2.97892760287949,3.45326210247948,4.77889719091835,4.55375273647668,4.57626420943358,0.694238953340524,7.54541460090708,4.09178270927892,4.01871336956669,2.40780445460263,2.90268993867255,2.55812609801649,2.38134825454307,4.26751672549045,2.82419605412801,3.38971111170799,5.07055121192978,0.993573058514948,3.03891820588218,6.06209286477889,3.04603516955828,4.0556069000477,2.19790570540343,3.60226042885265,1.71804894248874,7.03539491234055,0.864328787928898,3.72757606696298,2.12124631155116,2.44627570932505,3.55649677461933,3.2639429643623,2.02265412931063,6.60462317580768,7.11907970238364,25.5493176133945,3.0083580899397,3.15464825135177,3.90995361781156,5.72901060029209,5.0251111720377,2.79550600698588,0.858452096273142,3.34757186162809,7.25581502856644,3.24269895188163,10.4846354574708,4.96334048535509,4.36804049420182,4.98786224520968,1.77169466726548,3.97964660709187,0.795229689809303,5.31193283835145,1.60753148465019,2.88832816854191,2.49264202817511,1.5748172408605,3.86900977278975,3.88797162611358,3.68978156359193,3.38864541386552,6.08473222365978,2.64000841298516,1.97216073266129,2.30298236783334,3.57347663186684,0,2.5426853765475,2.17199840701485,2.5926644736038,0.979762080328227,2.39460383124975,11.3287678634088,5.11164065356265,3.39936274560377,0.146552233678082,2.65013777824443,3.23207390903876,3.70251284879532,1.53978154095896,3.52407511158336,5.55294545352012,9.27505400088029,3.72815149812476,4.96166021811951,2.76656284657122,5.846044722283,2.55336503108073,2.72008901684737,3.0082787282724,2.45076461410769,2.29510841496863,3.76929831000562,1.77213635993397,2.68457782784319,5.25801908967299,4.58727356552057,5.10273637069521,5.09190504119344,1.93688088910723,5.7490987662569,2.57803499820801,4.28198000317451,2.58792401667989,2.81000943484129,1.44921028610825,1.34329322598187,2.57084640831947,0.554805861502613,2.84104507912634,3.27038272278348,1.77962244319307,0.915360273587694,1.05861646634267,1.86524640699337,2.21782724984451,2.86734180894664,1.79921244865442,3.41578505127771,1.24411862352257,3.19010057469594,2.08698024724694,1.95334891696384,0.380805212168795,2.03435366602331,3.45512452484863,2.36303225493475,0.928067519756987,2.78667122089031,2.40016658797892,1.71697852591396,2.02049693259551,5.04739592914604,1.34833881285112,3.43106546199881,1.82696004375648,3.85400073370863,4.16740453782901,2.44736704506468,3.76086566271124,2.77921302444875,1.31570429747224,2.47364804324233,1.73622634443823,3.20990637240838,1.53744911152768,1.0362910251936,1.82315973706429,3.45646090379327,1.16916185303633,1.99297260470045,1.79921933681429,0.982829546539238,4.91545817507439,6.33936370075881,1.9998739585493,1.60037594541211,3.61651457287713,1.70254786070051,2.02516545277025,0.979156554036111,1.24415452006595,4.47630299562781,2.372145850727,3.61711666268562,4.58680480406458,3.22491806912648,5.31437300254207,3.71807292777007,5.02780426175919,3.18004350653419,8.43820671513411,0,4.93746321166957,3.062454773532,4.49604575675217,5.6678630530234,3.99084647642878,2.66651273512982,2.52071696221718,2.00556032146232,3.39098855826887,7.13847101295772,4.12220417704308,2.71330363699803,4.58571496304198,6.70048863671962,3.4324388592045,4.1421595563606,1.39241355481392,5.26472298444801,4.0341013740704,1.56302802246618,2.61906694481422,2.78412259767164,6.65352387976704,3.91717990786689,2.34323429584154,3.72036233702131,3.7415328014405,2.7348740450911,1.09651553371436,6.94695649745012,0.703484977438482,7.02693352017774,1.60710550763486,4.03540466662589,2.42786241694653,3.87025725297206,2.48366636455389,1.95897778844825,2.91529616043611,6.25321543386852,2.82822926320251,3.42762138563508,2.44709084162552,5.0235579424329,3.29942738823604,7.00680408284473,13.6973808076424,3.67076905071656,0.47775168788705,5.64664698995585,1.89616334079272,3.95220846251626,8.51905534282639,2.40513409419076,3.31545862660859,2.0486217251274,2.76503864725637,3.8720462293825,2.83996801753357,2.64161554753389,2.54032230114557,3.2074961596167,1.5510319283216,0,1.23040974977572,3.82785911099448,3.04794812455674,2.58971534875158,2.77189578511867,1.1598144313382,5.34282092365053,2.10545517115895,5.37167092935694,2.73516208788408,4.96962760971424,2.19881033490858,4.22695961986686,3.55001127296545,3.49695296806332,3.29222107453066,7.35444965261716,1.64973582971138,3.33724394095407,5.04978880556046,5.9171801861676,2.88876094969289,5.54505116081136,7.09036767709349,4.4973520166218,8.74914299167722,4.58763333230399,3.20965466756673,10.2247094354512,5.96348068425903,6.16360207551241,3.47097436825006,2.65166811744567,3.49080552272302,7.93540260773101,1.85997509083376,1.38652688589425,1.29787968637137,5.29898984307331,3.16870158694717,4.18105053337742,1.1218771271618,3.47382626845229,1.47031839255752,1.50424523575425,3.71315621269373,4.55539021265503,4.1458471972939,7.86090768550404,5.5440835294255,9.04644839562213,15.1138049016254,18.8707131459408,2.80329656451534,6.23742151126016,10.3079766368692,3.48346796635138,3.42233301085281,5.45551629418159,5.23572099366537,5.32256570473621,3.25613074443898,3.62872975984233,3.8614456457388,3.05405687162395,9.38563769613817,9.41259120208072,4.06896178315738,6.65756774185513,6.64203518850387,4.48795889224526 | |||
|short_description=p3@DLG1 | |||
}} |
Latest revision as of 16:53, 17 September 2015
Short description: | p3@DLG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_DLG1_5end |
Coexpression cluster: | NA |
Association with transcript: | 32bp_to_ENST00000392381, ENST00000392382, uc003fxp.2_5end |
EntrezGene: | DLG1 |
HGNC: | 2900 |
UniProt: | E7EQD7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 1.01e-14 | 53 |
common lymphoid progenitor | 1.01e-14 | 53 |
lymphoid lineage restricted progenitor cell | 2.28e-14 | 52 |
mature alpha-beta T cell | 4.23e-08 | 18 |
alpha-beta T cell | 4.23e-08 | 18 |
immature T cell | 4.23e-08 | 18 |
mature T cell | 4.23e-08 | 18 |
immature alpha-beta T cell | 4.23e-08 | 18 |
lymphocyte of B lineage | 2.82e-07 | 24 |
pro-B cell | 2.82e-07 | 24 |
T cell | 4.92e-07 | 25 |
pro-T cell | 4.92e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.68e-13 | 114 |
neural tube | 3.05e-07 | 56 |
neural rod | 3.05e-07 | 56 |
future spinal cord | 3.05e-07 | 56 |
neural keel | 3.05e-07 | 56 |