FFCP PHASE1:Hg19::chr3:196065414..196065425,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=116211 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25167 | |||
|TSSclassifier=strong | |||
|UniProt=E9PH22 | |||
|association_with_transcript=-40bp_to_ENST00000454715_5end | |||
|cluster_id=chr3:196065414..196065425,- | |||
|coexpression_cluster_id=C65 | |||
|description=CAGE_peak_3_at_TM4SF19_5end | |||
|id=chr3:196065414..196065425,- | |||
|ontology_enrichment_celltype=CL:0002009!4.63e-38!65;CL:0002194!2.96e-36!63;CL:0000576!2.96e-36!63;CL:0000040!2.96e-36!63;CL:0000559!2.96e-36!63;CL:0000557!2.77e-33!71;CL:0000766!3.78e-31!76;CL:0000839!7.36e-31!70;CL:0000860!9.52e-31!45;CL:0002057!3.75e-29!42;CL:0002087!2.97e-22!119;CL:0002031!1.46e-21!124;CL:0000763!5.59e-21!112;CL:0000049!5.59e-21!112;CL:0000738!3.78e-20!140;CL:0002032!4.57e-16!165;CL:0000837!4.57e-16!165;CL:0000037!2.86e-15!172;CL:0000566!2.86e-15!172;CL:0000988!1.48e-14!182;CL:0000063!6.97e-09!578 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.15e-74;33!CL:0002057;4.15e-74;33!CL:0000473;4.01e-72;39!CL:0000234;4.01e-72;39!CL:0000576;4.96e-38;48!CL:0000766;3.05e-25;69!CL:0000235;1.69e-14;6!CL:0002087;1.02e-13;104!CL:0000763;1.18e-13;100!CL:0000738;4.26e-10;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,5.88e-80,48;CL:0000234,5.88e-80,48;CL:0002009,1.39e-75,61;CL:0002194,4.02e-74,59;CL:0000576,4.02e-74,59;CL:0000040,4.02e-74,59;CL:0000559,4.02e-74,59;CL:0000557,4.51e-68,67;CL:0000860,7.08e-67,42;CL:0002057,7.08e-67,42;CL:0000839,2.13e-65,66;CL:0000766,2.98e-59,72;CL:0002031,4.13e-45,120;CL:0002087,5.05e-45,115;CL:0000763,7.01e-39,108;CL:0000049,7.01e-39,108;CL:0000738,1.22e-38,136;CL:0002032,4.34e-31,161;CL:0000837,4.34e-31,161;CL:0000037,2.24e-29,168;CL:0000988,2.27e-27,177;CL:0000235,3.19e-14,6;CL:0000219,1.90e-10,386;CL:0000134,4.04e-10,354;CL:0002320,1.00e-09,361 | |||
|ontology_enrichment_development_v019=CL:0002057;1.08e-50;42!CL:0000049;3.70e-12;108 | |||
|ontology_enrichment_disease=DOID:305!1.65e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!9.27e-29!80;UBERON:0001474!1.73e-25!86;UBERON:0002390!5.15e-23!102;UBERON:0003061!5.15e-23!102;UBERON:0002193!4.20e-21!112;UBERON:0002405!3.26e-20!115;UBERON:0004765!3.53e-20!101;UBERON:0001434!3.53e-20!101;UBERON:0002204!1.32e-08!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.33e-59,76;UBERON:0001474,4.80e-54,82;UBERON:0004765,1.87e-48,90;UBERON:0002405,1.32e-46,93;UBERON:0002390,9.06e-44,98;UBERON:0003061,9.06e-44,98;UBERON:0001434,1.03e-42,100;UBERON:0002193,7.01e-39,108;UBERON:0002204,6.55e-22,167;UBERON:0003081,1.52e-17,203;UBERON:0000926,3.79e-10,315;UBERON:0004120,3.79e-10,315;UBERON:0006603,3.79e-10,315;UBERON:0002384,3.43e-09,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0.383829398097213,0.309632246632152,0,0,0.369754010166788,0,0,0,1.10799081706375,0.200544447470142,0.868043482863407,0,2.59114932815184,0.515151135268373,2.61716829803216,3.77875943688809,2.42584061187816,5.57829688573643,9.86802931252382,9.60089749774821,5.75384784644301,7.94098190240212,3.54723344832878,4.82643953031266,5.16387746867061,2.70852973188684,4.32957380947991,7.09555990150399,4.71919317334678,2.75475503133812,4.49300637906531,1.91801137739712,1.9791078011203,2.39356389145958,0.852449501065388,4.35313857942876,6.24123747160254,3.73693349397345,10.0499466102697,5.21482918420201,6.08128765174327,1.21079900526674,5.15588690382591,0.949387162322653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.950452044448374,0.301150238155546,0.127986611154418,0,1.4206635122641,0.821127996921047,1.20964045934839,0,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,1.29818957461873,0.870648686496336,0.26591592103773,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0.570471821544449,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0.286804595389004,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0.269662616320329,0.196221465125346,0,0,1.40241773803446,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0.462985512576611,0,0,0,3.69325509131096,2.10603838625314,2.37809859661965,0.93733833986777,0,0,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0.65147236858747,0,0.791951872933429,0,0,0.099972991182057,0,1.00451418286425,2.10833939483032,0,0,0,0,0,0,0,1.18218456121156,0.862510299438069,1.54011643535698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0.426910231213777,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0.254876273045038,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0.15350367472613,0,0.107420244868274,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48111056362756,0,0,0.0941438007767792,0,0,0,0.229723400206959,0,0.764637207142375,0,0.714695326373367,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0.333926115068718,4.61450847834927,0,0,0,0,0.102268682502155,0,0,0.359473404589307,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48124672601102,0,0,0,0.31900115973192,0,0,0,0,0,0.676786981851542,0.19606253431774,0.167821586975843,0.948768663620925,0,2.74297483886435,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586993856796269,0,0,0,0,0,0,0.103688191397247,0,0,0.941798755221676,0,0,0,0,0.293977192243133,1.04471047896483,0,0,0.19351266257817,0.0730893170861856,0.0821154570532092,0.193978032976839,0,0,0.411125773940253,1.19228767021794,0,0,0.240476460754601,0,0,0,0,0,0.576219191952599,1.36677789121976,0,0.271808412147228,1.04602846312333,0,0.866851769704557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,2.32140586367385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0.684347351537318,0.704815022316672,0.213574825135389,0,0.414239055347196,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0.151649117541648,0,0.941063278792687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265841714557995,0,0,0,0.406870733204662,0.181848659202559,0,0,0,0,0,0,0,1.34833881285112,0,0,0,0,0,0.179088841081487,0,0.219284049578707,0,0.192914038270915,0.168942440653073,0.512483037175893,1.38172136692479,0.911579868532147,0,0,0,0,0,0.245772908753719,1.05656061679314,0,0,0,0,0.184105950251841,0.139879507719444,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0.589848616738702,0.183428598521679,0,0,0,0,0.150420656698515,0.20170506870352,0,0,0.327543835020193,0.295712172434091,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0.514464028312255,0,0,0.118193840883968,0.111231401892069,0,0,0.280272163313789,0,0.215927591218621,1.43325506366115,0,0,0,0,0,0.414432328326074,0,0,0,2.36664001461131,2.64161554753389,0,0,0.31020638566432,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,1.05673990496671,0,0,0.470317296361523,0,0,0,0,0,0,0,0,0.699588091474503,0.535661815816973,4.94052820401969,2.08627553391837,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0.275684698604535,0,0,0,0,0,0,0,0,0,0.112131862580613,0.0636471582781649,0,0.217716747896961,0,0.134704106029175,0.215166616178029,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@TM4SF19 | |||
}} |
Latest revision as of 15:25, 17 September 2015
Short description: | p3@TM4SF19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TM4SF19_5end |
Coexpression cluster: | C65_CD14_Eosinophils_Monocytederived_Basophils_immature_Macrophage_Neutrophils |
Association with transcript: | -40bp_to_ENST00000454715_5end |
EntrezGene: | TM4SF19 |
HGNC: | 25167 |
UniProt: | E9PH22 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 5.88e-80 | 48 |
phagocyte | 5.88e-80 | 48 |
macrophage dendritic cell progenitor | 1.39e-75 | 61 |
monopoietic cell | 4.02e-74 | 59 |
monocyte | 4.02e-74 | 59 |
monoblast | 4.02e-74 | 59 |
promonocyte | 4.02e-74 | 59 |
granulocyte monocyte progenitor cell | 4.51e-68 | 67 |
classical monocyte | 7.08e-67 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.08e-67 | 42 |
myeloid lineage restricted progenitor cell | 2.13e-65 | 66 |
myeloid leukocyte | 2.98e-59 | 72 |
hematopoietic lineage restricted progenitor cell | 4.13e-45 | 120 |
nongranular leukocyte | 5.05e-45 | 115 |
myeloid cell | 7.01e-39 | 108 |
common myeloid progenitor | 7.01e-39 | 108 |
leukocyte | 1.22e-38 | 136 |
hematopoietic oligopotent progenitor cell | 4.34e-31 | 161 |
hematopoietic multipotent progenitor cell | 4.34e-31 | 161 |
hematopoietic stem cell | 2.24e-29 | 168 |
hematopoietic cell | 2.27e-27 | 177 |
macrophage | 3.19e-14 | 6 |
motile cell | 1.90e-10 | 386 |
mesenchymal cell | 4.04e-10 | 354 |
connective tissue cell | 1.00e-09 | 361 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.33e-59 | 76 |
bone element | 4.80e-54 | 82 |
skeletal element | 1.87e-48 | 90 |
immune system | 1.32e-46 | 93 |
hematopoietic system | 9.06e-44 | 98 |
blood island | 9.06e-44 | 98 |
skeletal system | 1.03e-42 | 100 |
hemolymphoid system | 7.01e-39 | 108 |
musculoskeletal system | 6.55e-22 | 167 |
lateral plate mesoderm | 1.52e-17 | 203 |
mesoderm | 3.79e-10 | 315 |
mesoderm-derived structure | 3.79e-10 | 315 |
presumptive mesoderm | 3.79e-10 | 315 |
connective tissue | 3.43e-09 | 371 |