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FFCP PHASE1:Mm9::chr12:77356335..77356356,+: Difference between revisions

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{{FFCP|EntrezGene=108156|HGNC=|MCL_coexpression_id=8|UniProt=Q8BXX7|association_with_transcript=-27bp_to_ENSMUST00000172157_5end|description=CAGE_peak_5_at_Mthfd1_5end|id=chr12:77356335..77356356,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0009569!1.22e-14!66;UBERON:0001041!1.76e-13!92;UBERON:0005177!3.52e-13!85;UBERON:0002365!6.04e-13!25;UBERON:0002330!6.04e-13!25;UBERON:0002107!7.97e-13!22;UBERON:0007499!7.97e-13!22;UBERON:0006925!7.97e-13!22;UBERON:0009497!7.97e-13!22;UBERON:0000015!7.97e-13!22;UBERON:0002423!7.97e-13!22;UBERON:0006235!7.97e-13!22;UBERON:0008835!7.97e-13!22;UBERON:0003894!7.97e-13!22;UBERON:0004161!7.97e-13!22;UBERON:0008836!7.97e-13!22;UBERON:0004921!1.41e-12!126;UBERON:0004185!1.41e-12!126;UBERON:0001007!1.74e-12!128;UBERON:0001555!1.74e-12!128;UBERON:0007026!1.74e-12!128;UBERON:0000077!2.91e-12!97;UBERON:0004119!1.35e-11!130;UBERON:0000925!1.35e-11!130;UBERON:0006595!1.35e-11!130;UBERON:0005172!2.53e-11!49;UBERON:0005173!2.53e-11!49;UBERON:0002417!2.53e-11!49;UBERON:0000916!2.53e-11!49;UBERON:0009854!2.64e-11!23;UBERON:0009856!2.64e-11!23;UBERON:0003104!1.28e-10!131;UBERON:0009142!1.28e-10!131;UBERON:0002100!2.59e-10!98;UBERON:0005057!1.43e-09!51;UBERON:0000466!2.58e-09!79;UBERON:0005911!1.98e-08!69;UBERON:0002405!3.97e-07!70|ontology_enrichment_uberon_v019_2=UBERON:0005177,7.52e-15,79;UBERON:0009569,2.58e-14,66;UBERON:0002365,3.98e-13,25;UBERON:0002330,3.98e-13,25;UBERON:0002107,5.28e-13,22;UBERON:0007499,5.28e-13,22;UBERON:0006925,5.28e-13,22;UBERON:0009497,5.28e-13,22;UBERON:0000015,5.28e-13,22;UBERON:0002423,5.28e-13,22;UBERON:0006235,5.28e-13,22;UBERON:0008835,5.28e-13,22;UBERON:0003894,5.28e-13,22;UBERON:0004161,5.28e-13,22;UBERON:0008836,5.28e-13,22;UBERON:0002100,2.05e-12,90;UBERON:0001041,2.42e-12,80;UBERON:0009854,1.07e-11,23;UBERON:0009856,1.07e-11,23;UBERON:0004921,2.33e-11,114;UBERON:0001007,3.71e-11,116;UBERON:0001555,3.71e-11,116;UBERON:0007026,3.71e-11,116;UBERON:0005172,5.88e-11,49;UBERON:0005173,5.88e-11,49;UBERON:0002417,5.88e-11,49;UBERON:0000916,5.88e-11,49;UBERON:0004119,2.96e-10,118;UBERON:0000925,2.96e-10,118;UBERON:0006595,2.96e-10,118;UBERON:0005911,1.15e-08,69|phase1_expression=1.28119077683835,0.348975407639361,0.454999239389536,0.60492842261366,2.00358291978539,0.839396359559449,1.40167584357315,1.54947988129892,0.422366166455,0.936258105287974,4.28044920563762,3.90883579077148,1.54080656938085,1.22388563386596,4.33042690360362,4.45445588257617,5.59649502502517,2.05050407482854,1.64537320326887,1.27316895539409,1.87095238332354,1.39007331681239,1.30599894569468,2.55987876469451,0.91763712426868,0,0.86152399231815,0.215471232685889,3.6104449696711,2.26827116783938,0.665191531965914,8.25539875497521,4.92051830067656,0,4.91047753577167,3.15845826181135,5.10423390655923,0.418531630736908,0.7813353445238,0.523523743973798,0.588231488031014,0,0,4.53228544712078,2.23029248682932,2.0190142737785,0,6.32272953503295,2.41654801007919,2.72201858703997,2.37976916763116,1.43752564364972,1.51004345451963,2.17608642603403,0.336093799142464,1.02903774414379,0.286533439938757,1.03134418455488,0.809265843438391,0.528990979272033,1.90149421051854,1.69422266034566,2.66788438833342,0.899899717281399,0.988866362566974,0,1.19840044207362,0,1.8664130215526,0.945041568321835,0.630974884054146,0.285650984403804,1.76694832761291,1.34739879136449,0.958454710182364,2.75765635983006,0,2.042997409363,1.53606533256243,0.527545150920775,0.274462930807229,0,1.67509799400829,2.8138130501584,1.83357897332172,0.883885756421003,0.996601765593721,0.745597783301202,1.59025005999687,1.28471652181535,1.15945795480671,12.0459342777394,4.0798280022465,16.1910957491345,15.5946340187441,16.1289679355041,3.5111105032938,2.04516387093669,1.03914401841148,1.06001872353102,0.704217098883403,2.56652954828636,5.09610479413291,0,4.5463118612355,3.04031838570118,3.53867111510348,5.1382745873577,1.03575153458869,1.03909497345377,1.90833859442749,1.21786191324856,1.38369298353635,0.753613202763113,0.940709657085638,0.879666139307728,1.23597483867187,0.433798070759735,1.76922110389975,1.13236794963186,2.20841518460394,1.45462575940567,0,2.34224637609238,1.46612694769419,2.81002760729451,1.7972268675888,1.79970819298022,1.14363204365758,1.3481157546434,0.915001205637253,0.753926112677186,0.869121600961382,0.767146371990992,1.45451631191692,1.94689515681309,1.2220723662038,0.995255764880744,0.758168275301024,1.05220927943237,2.60240885925407,1.83921683546778,1.0803727788321,1.50704817835715,1.08858398642125,1.15302348256365,0.749613796477831,2.06962696591213,2.37124792226126,1.51284864134255,0.703804496655795,1.09597866213787,1.39023624612799,0.348252166522167,0.61734640922383,2.38841120182192,5.61770549850588,1.80143534980301,2.84163499395593,0.621377317606506,1.17263029990548,2.16074473753218,2.13070262026689,1.18058539048442,0.617068451549513,1.62773761325285,1.87791380979733,0.817357396570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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=108156
|HGNC=
|MCL_coexpression_id=8
|TSSclassifier=NA
|UniProt=Q8BXX7
|association_with_transcript=-27bp_to_ENSMUST00000172157_5end
|cluster_id=chr12:77356335..77356356,+
|description=CAGE_peak_5_at_Mthfd1_5end
|id=chr12:77356335..77356356,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0005177,7.52e-15,79;UBERON:0009569,2.58e-14,66;UBERON:0002365,3.98e-13,25;UBERON:0002330,3.98e-13,25;UBERON:0002107,5.28e-13,22;UBERON:0007499,5.28e-13,22;UBERON:0006925,5.28e-13,22;UBERON:0009497,5.28e-13,22;UBERON:0000015,5.28e-13,22;UBERON:0002423,5.28e-13,22;UBERON:0006235,5.28e-13,22;UBERON:0008835,5.28e-13,22;UBERON:0003894,5.28e-13,22;UBERON:0004161,5.28e-13,22;UBERON:0008836,5.28e-13,22;UBERON:0002100,2.05e-12,90;UBERON:0001041,2.42e-12,80;UBERON:0009854,1.07e-11,23;UBERON:0009856,1.07e-11,23;UBERON:0004921,2.33e-11,114;UBERON:0001007,3.71e-11,116;UBERON:0001555,3.71e-11,116;UBERON:0007026,3.71e-11,116;UBERON:0005172,5.88e-11,49;UBERON:0005173,5.88e-11,49;UBERON:0002417,5.88e-11,49;UBERON:0000916,5.88e-11,49;UBERON:0004119,2.96e-10,118;UBERON:0000925,2.96e-10,118;UBERON:0006595,2.96e-10,118;UBERON:0005911,1.15e-08,69
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|short_description=p5@Mthfd1
}}

Latest revision as of 19:19, 26 September 2015

Short description:p5@Mthfd1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Mthfd1_5end
Coexpression cluster:MCL_coexpression_mm9:8
Association with transcript: -27bp_to_ENSMUST00000172157_5end
EntrezGene:Mthfd1
Link to Zenbu:ZENBU


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CAGE Expression



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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

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