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FFCP PHASE1:Mm9::chr12:74685649..74685674,+: Difference between revisions

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{{FFCP|EntrezGene=18755|HGNC=|MCL_coexpression_id=7|UniProt=E9Q0I5|association_with_transcript=-108bp_to_ENSMUST00000164444_5end|description=CAGE_peak_3_at_Prkch_5end|id=chr12:74685649..74685674,+|ontology_enrichment_celltype=CL:0000084!8.36e-08!11;CL:0000827!8.36e-08!11;CL:0000791!3.29e-07!9;CL:0000789!3.29e-07!9;CL:0002420!3.29e-07!9;CL:0002419!3.29e-07!9;CL:0000790!3.29e-07!9|ontology_enrichment_celltype_v019_2=CL:0000084,1.53e-10,11;CL:0000827,1.53e-10,11;CL:0000791,1.09e-09,9;CL:0000789,1.09e-09,9;CL:0002420,1.09e-09,9;CL:0002419,1.09e-09,9;CL:0000790,1.09e-09,9;CL:0000838,2.56e-09,12;CL:0000624,9.89e-09,8;CL:0000542,2.72e-08,13;CL:0000051,2.72e-08,13;CL:0000893,9.40e-07,6;CL:0002489,9.40e-07,6;CL:0000898,9.40e-07,6;CL:0000809,9.40e-07,6;CL:0000810,9.40e-07,6;CL:0000895,9.40e-07,6;CL:0000808,9.40e-07,6;CL:0000894,9.40e-07,6;CL:0000806,9.40e-07,6;CL:0000807,9.40e-07,6;CL:0000805,9.40e-07,6;CL:0002425,9.40e-07,6;CL:0002436,9.40e-07,6;CL:0002427,9.40e-07,6;CL:0002428,9.40e-07,6;CL:0002429,9.40e-07,6;CL:0002433,9.40e-07,6;CL:0002431,9.40e-07,6;CL:0002432,9.40e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001004!1.36e-09!42;UBERON:0000065!2.19e-09!41;UBERON:0000077!2.54e-08!97;UBERON:0000926!1.01e-07!193;UBERON:0004120!1.01e-07!193;UBERON:0006603!1.01e-07!193;UBERON:0002048!1.39e-07!14;UBERON:0000117!1.39e-07!14;UBERON:0000171!1.39e-07!14;UBERON:0000170!1.39e-07!14;UBERON:0005597!1.39e-07!14;UBERON:0000118!1.39e-07!14;UBERON:0001041!3.24e-07!92|ontology_enrichment_uberon_v019_2=UBERON:0001004,2.19e-11,42;UBERON:0000065,4.32e-11,41;UBERON:0002048,1.64e-08,14;UBERON:0000117,1.64e-08,14;UBERON:0000171,1.64e-08,14;UBERON:0000170,1.64e-08,14;UBERON:0005597,1.64e-08,14;UBERON:0000118,1.64e-08,14;UBERON:0005153,2.64e-07,17|phase1_expression=0,0,0,0,0,0.16787927191189,0,6.58528949552039,36.1827015929784,23.8745816848433,9.07455231595176,5.50427897067821,3.25281386869291,1.57356724354195,0.333109761815663,0.404950534779652,0,0.315462165358238,0.274228867211478,0,1.02051948181284,1.48936426801328,1.82839852397255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.25362142011344,5.71359458542189,0,0,0,0,0,0,0,0,0,0.988866362566974,0,0,0,0.311068836925433,0.135005938331691,0,0.571301968807607,0.220868540951614,0.122490799214954,0.191690942036473,0.919218786610021,0,0.766124028511126,0.614426133024974,0.659431438650969,0.365950574409639,0,0,0.56276261003168,0.30559649555362,0,0.427115042397309,0,0,0.0755715601067855,6.37701875143691,0,0.679971333707751,0,0.649776417447669,0,0.561777680527007,0,0,0,0.14084341977668,0,0,0,0.216491041011214,0.253359865475099,0,0.5709193985953,1.55362730188303,1.48442139064825,0.867426633830679,2.74018930480927,0.691846491768175,0.452167921657868,0.940709657085638,0.628332956648377,1.97755974187499,1.87979163995885,0.884610551949874,1.29413479957927,1.54589062922275,0.969750506270444,0,0,0.209446706813455,0,0,0,0.381210681219194,0,1.83000241127451,0.753926112677186,0.173824320192276,0.767146371990992,1.24672826735736,0.973447578406546,0.509196819251581,0.746441823660558,0,0.420883711772948,0.260240885925407,0.459804208866946,0.900310649026746,1.20563854268572,1.56483948048054,1.0249097622788,1.3118241438362,2.06962696591213,0.215567992932842,0.756424320671277,1.23165786914764,0.657587197282725,0.556094498451196,1.39300866608867,1.64625709126355,0.796137067273973,0,0,0,0.828503090142008,1.64168241986767,1.08037236876609,1.89395788468168,0.787056926989615,1.54267112887378,2.55787339225449,1.60964040839772,1.16765342367169,0.822799249567402,1.80584210487005,1.94565142910054,1.90059983652932,2.19550115291051,1.34206418760372,0.210289948564127,0.411618449517138,0.330418782983798,0.528901133327089,0.853153002140936,0.464473343720877,0.38660238396628,0,0.22237804384487,0.190225626112559,0.474529061544512,0.329397909448022,0.502670417600539,0,0.19496408711912,0,0.216138049874694,0.796565093017469,0.948339504765408,0.571242563048644,2.25415471346161,0.610953983535943,0.969762435838129,1.47285221769669,2.46622494784603,1.77132177575523,1.8839847340965,0.987177311374404,0,0.83422552858047,0.786235980452812,0,0.202860121388503,0.72353147925725,0.763877555344259,1.72617682470486,0,0.549122826376163,0,0.744281895337007,0.312037673114561,1.26289438973556,0.179397413521912,0.482443521363367,4.80358294433172,0.947457058852424,1.95557971730431,0.848725428875941,1.17345124144251,2.1775813467436,1.6663054862021,2.73187107000918,5.51723004371669,5.09368786192182,3.18909537314974,5.73521601505083,5.00786447411097,5.06271705035291,1.50791283939272,0,1.47529281905711,0,0,0.35163505977661,0,1.51482556322624,0,0,0,0,0,0,0,0,0,0,0.99358059645788,0,0.162886959353576,0.494910368917606,1.32745138339963,0,0.302323556964751,0.754420319023592,1.77181135728464,2.15204603560749,0.516856586336442,0.727067458955011,1.06949213515416,0.948110273807448,3.16255825724996,0,0,0.900305470156551,0.646793418913773,1.07168517515796,0.709360934569094,0.891844088010353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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=18755
|HGNC=
|MCL_coexpression_id=7
|TSSclassifier=NA
|UniProt=E9Q0I5
|association_with_transcript=-108bp_to_ENSMUST00000164444_5end
|cluster_id=chr12:74685649..74685674,+
|description=CAGE_peak_3_at_Prkch_5end
|id=chr12:74685649..74685674,+
|ontology_enrichment_celltype=CL:0000084!8.36e-08!11;CL:0000827!8.36e-08!11;CL:0000791!3.29e-07!9;CL:0000789!3.29e-07!9;CL:0002420!3.29e-07!9;CL:0002419!3.29e-07!9;CL:0000790!3.29e-07!9
|ontology_enrichment_celltype_v019_2=CL:0000084,1.53e-10,11;CL:0000827,1.53e-10,11;CL:0000791,1.09e-09,9;CL:0000789,1.09e-09,9;CL:0002420,1.09e-09,9;CL:0002419,1.09e-09,9;CL:0000790,1.09e-09,9;CL:0000838,2.56e-09,12;CL:0000624,9.89e-09,8;CL:0000542,2.72e-08,13;CL:0000051,2.72e-08,13;CL:0000893,9.40e-07,6;CL:0002489,9.40e-07,6;CL:0000898,9.40e-07,6;CL:0000809,9.40e-07,6;CL:0000810,9.40e-07,6;CL:0000895,9.40e-07,6;CL:0000808,9.40e-07,6;CL:0000894,9.40e-07,6;CL:0000806,9.40e-07,6;CL:0000807,9.40e-07,6;CL:0000805,9.40e-07,6;CL:0002425,9.40e-07,6;CL:0002436,9.40e-07,6;CL:0002427,9.40e-07,6;CL:0002428,9.40e-07,6;CL:0002429,9.40e-07,6;CL:0002433,9.40e-07,6;CL:0002431,9.40e-07,6;CL:0002432,9.40e-07,6
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001004!1.36e-09!42;UBERON:0000065!2.19e-09!41;UBERON:0000077!2.54e-08!97;UBERON:0000926!1.01e-07!193;UBERON:0004120!1.01e-07!193;UBERON:0006603!1.01e-07!193;UBERON:0002048!1.39e-07!14;UBERON:0000117!1.39e-07!14;UBERON:0000171!1.39e-07!14;UBERON:0000170!1.39e-07!14;UBERON:0005597!1.39e-07!14;UBERON:0000118!1.39e-07!14;UBERON:0001041!3.24e-07!92
|ontology_enrichment_uberon_v019_2=UBERON:0001004,2.19e-11,42;UBERON:0000065,4.32e-11,41;UBERON:0002048,1.64e-08,14;UBERON:0000117,1.64e-08,14;UBERON:0000171,1.64e-08,14;UBERON:0000170,1.64e-08,14;UBERON:0005597,1.64e-08,14;UBERON:0000118,1.64e-08,14;UBERON:0005153,2.64e-07,17
|phase1_expression=0,0,0,0,0,0.16787927191189,0,6.58528949552039,36.1827015929784,23.8745816848433,9.07455231595176,5.50427897067821,3.25281386869291,1.57356724354195,0.333109761815663,0.404950534779652,0,0.315462165358238,0.274228867211478,0,1.02051948181284,1.48936426801328,1.82839852397255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.25362142011344,5.71359458542189,0,0,0,0,0,0,0,0,0,0.988866362566974,0,0,0,0.311068836925433,0.135005938331691,0,0.571301968807607,0.220868540951614,0.122490799214954,0.191690942036473,0.919218786610021,0,0.766124028511126,0.614426133024974,0.659431438650969,0.365950574409639,0,0,0.56276261003168,0.30559649555362,0,0.427115042397309,0,0,0.0755715601067855,6.37701875143691,0,0.679971333707751,0,0.649776417447669,0,0.561777680527007,0,0,0,0.14084341977668,0,0,0,0.216491041011214,0.253359865475099,0,0.5709193985953,1.55362730188303,1.48442139064825,0.867426633830679,2.74018930480927,0.691846491768175,0.452167921657868,0.940709657085638,0.628332956648377,1.97755974187499,1.87979163995885,0.884610551949874,1.29413479957927,1.54589062922275,0.969750506270444,0,0,0.209446706813455,0,0,0,0.381210681219194,0,1.83000241127451,0.753926112677186,0.173824320192276,0.767146371990992,1.24672826735736,0.973447578406546,0.509196819251581,0.746441823660558,0,0.420883711772948,0.260240885925407,0.459804208866946,0.900310649026746,1.20563854268572,1.56483948048054,1.0249097622788,1.3118241438362,2.06962696591213,0.215567992932842,0.756424320671277,1.23165786914764,0.657587197282725,0.556094498451196,1.39300866608867,1.64625709126355,0.796137067273973,0,0,0,0.828503090142008,1.64168241986767,1.08037236876609,1.89395788468168,0.787056926989615,1.54267112887378,2.55787339225449,1.60964040839772,1.16765342367169,0.822799249567402,1.80584210487005,1.94565142910054,1.90059983652932,2.19550115291051,1.34206418760372,0.210289948564127,0.411618449517138,0.330418782983798,0.528901133327089,0.853153002140936,0.464473343720877,0.38660238396628,0,0.22237804384487,0.190225626112559,0.474529061544512,0.329397909448022,0.502670417600539,0,0.19496408711912,0,0.216138049874694,0.796565093017469,0.948339504765408,0.571242563048644,2.25415471346161,0.610953983535943,0.969762435838129,1.47285221769669,2.46622494784603,1.77132177575523,1.8839847340965,0.987177311374404,0,0.83422552858047,0.786235980452812,0,0.202860121388503,0.72353147925725,0.763877555344259,1.72617682470486,0,0.549122826376163,0,0.744281895337007,0.312037673114561,1.26289438973556,0.179397413521912,0.482443521363367,4.80358294433172,0.947457058852424,1.95557971730431,0.848725428875941,1.17345124144251,2.1775813467436,1.6663054862021,2.73187107000918,5.51723004371669,5.09368786192182,3.18909537314974,5.73521601505083,5.00786447411097,5.06271705035291,1.50791283939272,0,1.47529281905711,0,0,0.35163505977661,0,1.51482556322624,0,0,0,0,0,0,0,0,0,0,0.99358059645788,0,0.162886959353576,0.494910368917606,1.32745138339963,0,0.302323556964751,0.754420319023592,1.77181135728464,2.15204603560749,0.516856586336442,0.727067458955011,1.06949213515416,0.948110273807448,3.16255825724996,0,0,0.900305470156551,0.646793418913773,1.07168517515796,0.709360934569094,0.891844088010353,2.30368628842969,1.8267896946876,2.58138878870081,2.75381692122966,0.220528398054962,1.97863503529776,0.484393280087717,1.38719727334758,2.50681922406587,4.26766339337159,0.874442509889552,0.18542530201051,0.341741761595705,0.619160603889667,0.925972636848558,0.188368457004691,0.683471138605126,1.14389086603261,0.849892149969277,1.53946597556024,1.79659965945751,0.954670618015114,0.474503990371703,1.42323626988794,0.972048067396211,2.71814784818809,1.74690050996942,1.34864346384821,0.743881101528023,0.785267825952089,0.259229946583586,1.24267862617385,0,0.598066184175915,0.165458490457098,0.194451188344048,0.387479470433193,0.337912250981556,0.469428954583016,0.13020438484395,0.209718688851422,0,0,1.58005560314089,0.405450430580328,1.95150818613172,1.16928740680016,1.61124026100733,1.39076948346885,0.721172697119813,0.886137163047463,0.504832249740738,0.914481679859998,1.51239277705261,1.75424185331554,1.82802499116626,2.22066114144981,3.17422537061296,0.665957860122194,0.269141569828427,0.167884616364078,0.965947970160952,2.064507229963,0.915758121336325,3.00115730710692,0,0,0,0,0.171853182343688,0,0,0,0,0,0.51776031175182,0.207574695168353,1.19707462020309,1.36586884603307,0.972426868273176,0.209613162627982,1.10306105070008,2.22246727801615,1.64828045791115,1.28367683836726,0.505394423527595,1.01391719956096,1.69763707247469,1.591905626988,1.47257850531199,0.861532034334199,0,0.927074607558844,0.578727661391115,0.824171801606613,1.03039244094078,1.02860775715625,0.354951612318675,1.1921809497366,0.436039249896986,1.41164070622996,1.18460451048347,0.914639864363863,0.263069711437843,0.814824683075171,1.12228454331548,1.06771516311757,0.788035859004508,0.409231043169689,1.23949472948773,1.15743966588685,0.999242311751784,0.935726433781634,1.93383948643468,1.53030665655075,1.32354851471709,1.62307484934295
|short_description=p3@Prkch
}}

Latest revision as of 18:41, 26 September 2015

Short description:p3@Prkch
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Prkch_5end
Coexpression cluster:MCL_coexpression_mm9:7
Association with transcript: -108bp_to_ENSMUST00000164444_5end
EntrezGene:Prkch
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Prkch

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E96.59
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E736.18
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F223.87
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E69.07
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F15.50
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E43.25
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.57
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.32
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.02
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.49
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.83
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I97.25
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A15.71
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.31
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.77
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.66
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.37
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.31
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.43
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G36.38
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.57
accessory axillary lymph node, adult.CNhs10475.1063-29H91.55
adrenal gland, adult.CNhs10508.49-24D71.48
adrenal gland, embryo E14.CNhs11038.406-44C50.87
adrenal gland, embryo E16.CNhs11004.1254-43D62.74
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.94
adrenal gland, neonate N25.CNhs11223.1377-27I30.63
amnion, adult pregnant day17.5.CNhs10488.583-22A81.98
aorta, adult.CNhs10498.46-23H11.88
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F51.29
bone (os femoris), neonate N16.CNhs11225.1525-43A61.55
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.38
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D81.83
corpus striatum, neonate N00.CNhs11226.630-43F10.75
cortex, adult.CNhs10473.12-14D50.17
cortex, neonate N30.CNhs11107.1392-42F20.77
diencephalon, adult.CNhs10482.20-12F21.25
diencephalon, neonate N30.CNhs11201.1388-42B20.97
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.51
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.75
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.90
eyeball, embryo E17.CNhs11023.1261-18D41.21
eyeball, neonate N00.CNhs11207.633-15C61.56
eyeball, neonate N01.CNhs11140.1532-43E71.02
eyeball, neonate N02.CNhs11205.1551-44G81.31
eyeball, neonate N16.CNhs11188.777-19A22.07
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E21.23
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C41.39
forelimb, embryo E18.CNhs11008.1520-43B51.65
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.83
heart, embryo E12.CNhs11015.353-12F51.64
heart, embryo E13.CNhs11013.376-3I91.08
heart, embryo E14.CNhs10597.403-26D41.89
heart, embryo E15.CNhs11017.431-16C80.79
heart, embryo E16.CNhs11021.457-17C61.54
heart, embryo E17.CNhs11025.479-18E52.56
heart, embryo E18.CNhs11030.1283-20G31.61
heart, neonate N00.CNhs11213.639-21E31.17
heart, neonate N03.CNhs11221.1349-25I20.82
heart, neonate N10.CNhs11118.749-24G11.81
heart, neonate N16.CNhs11209.782-15G11.95
heart, neonate N20.CNhs11127.821-26I61.90
heart, neonate N25.CNhs11196.1351-25D32.20
heart, neonate N30.CNhs11202.1390-42D21.34
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G10.41
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.80
kidney, embryo E14.CNhs10606.411-4I90.95
kidney, embryo E15.CNhs10997.434-16F80.57
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.97
kidney, neonate N00.CNhs11214.646-21G71.47
kidney, neonate N10.CNhs11206.758-6D52.47
kidney, neonate N20.CNhs11113.832-19I11.77
kidney, neonate N25.CNhs11122.1353-25F31.88
kidney, neonate N30.CNhs11203.1385-42H10.99
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.83
liver, embryo E13.CNhs10524.378-3H60.79
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.72
liver, embryo E17.CNhs10510.481-18A30.76
liver, embryo E18.CNhs10579.499-43G41.73
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A31.26
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B14.80
lung, embryo E12.CNhs10522.354-16G20.95
lung, embryo E14.CNhs10604.404-26F81.96
lung, embryo E15.CNhs11020.432-17C50.85
lung, embryo E16.CNhs10998.458-17B61.17
lung, embryo E17.CNhs10605.480-44A62.18
lung, embryo E18.CNhs10583.1287-20I61.67
lung, neonate N00.CNhs11224.640-42C62.73
lung, neonate N06.CNhs11212.683-20E55.52
lung, neonate N07.CNhs11111.715-19A35.09
lung, neonate N10.CNhs11219.750-23E63.19
lung, neonate N20.CNhs11109.822-18A45.74
lung, neonate N25.CNhs11119.1359-25C75.01
lung, neonate N30.CNhs11133.1394-42H25.06
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B61.48
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.35
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.51
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.99
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.75
pancreas, embryo E17.CNhs10599.1558-45G31.77
pancreas, embryo E18.CNhs10580.1535-43I72.15
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E23.16
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.90
pituitary gland, embryo E13.CNhs11009.370-44C70.65
pituitary gland, embryo E14.CNhs11037.398-44A51.07
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F60.89
pituitary gland, embryo E17.CNhs11039.1265-44F52.30
pituitary gland, neonate N00.CNhs11190.1308-22E91.83
placenta, adult pregnant day10.CNhs10472.539-13I72.58
placenta, adult pregnant day17.CNhs10464.577-18G32.75
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C31.98
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H31.39
skin, neonate N06.CNhs11097.693-20I52.51
skin, neonate N10.CNhs11108.762-6C44.27
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.93
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.68
spleen, neonate N25.CNhs11099.1354-25G31.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.85
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.54
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.80
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G81.42
stomach, embryo E16.CNhs11022.459-17D40.97
stomach, embryo E17.CNhs11006.1035-18D52.72
stomach, embryo E18.CNhs10999.1286-20C61.75
stomach, neonate N03.CNhs11193.1340-24B81.35
stomach, neonate N07.CNhs11210.718-18A90.74
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.60
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.47
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B51.58
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I21.95
thymus, embryo E16.CNhs11002.456-26C51.17
thymus, embryo E17.CNhs10581.478-18C11.61
thymus, embryo E18.CNhs10595.1273-19G41.39
thymus, neonate N02.CNhs11181.1541-43F80.72
thymus, neonate N03.CNhs11137.2104-43C70.89
thymus, neonate N06.CNhs11197.681-26C40.50
thymus, neonate N07.CNhs11211.713-19D30.91
thymus, neonate N10.CNhs11194.748-24E41.51
thymus, neonate N20.CNhs11186.820-7A21.75
thymus, neonate N25.CNhs11125.1362-25G71.83
thymus, neonate N30.CNhs11132.1393-42G22.22
tongue, adult.CNhs10499.32-1B43.17
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.67
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.27
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.97
uterus, adult pregnant day19.CNhs10497.590-15F52.06
uterus, adult.CNhs10509.92-27E50.92
vagina, adult.CNhs10502.89-27D53.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H21.37
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F21.10
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.70
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.59
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.47
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.86
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.41
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.07
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.24
whole body, embryo E17.5.CNhs10513.490-9F91.16
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C21.93
whole body, neonate N01.CNhs10576.659-23C61.53
whole body, neonate N06.CNhs10515.692-21D11.32
whole body, neonate N10.CNhs10518.761-6B41.62





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
T cell1.53e-1011
pro-T cell1.53e-1011
mature alpha-beta T cell1.09e-099
alpha-beta T cell1.09e-099
immature T cell1.09e-099
mature T cell1.09e-099
immature alpha-beta T cell1.09e-099
lymphoid lineage restricted progenitor cell2.56e-0912
CD4-positive, alpha-beta T cell9.89e-098
lymphocyte2.72e-0813
common lymphoid progenitor2.72e-0813
thymocyte9.40e-076
double negative thymocyte9.40e-076
naive T cell9.40e-076
double-positive, alpha-beta thymocyte9.40e-076
CD4-positive, alpha-beta thymocyte9.40e-076
naive thymus-derived CD4-positive, alpha-beta T cell9.40e-076
DN4 thymocyte9.40e-076
DN1 thymic pro-T cell9.40e-076
DN2 thymocyte9.40e-076
DN3 thymocyte9.40e-076
immature single positive thymocyte9.40e-076
early T lineage precursor9.40e-076
mature CD4 single-positive thymocyte9.40e-076
resting double-positive thymocyte9.40e-076
double-positive blast9.40e-076
CD69-positive double-positive thymocyte9.40e-076
CD69-positive, CD4-positive single-positive thymocyte9.40e-076
CD4-positive, CD8-intermediate double-positive thymocyte9.40e-076
CD24-positive, CD4 single-positive thymocyte9.40e-076

Uber anatomy
Ontology termp-valuen
respiratory system2.19e-1142
respiratory tract4.32e-1141
lung1.64e-0814
respiratory tube1.64e-0814
respiration organ1.64e-0814
pair of lungs1.64e-0814
lung primordium1.64e-0814
lung bud1.64e-0814
epithelial bud2.64e-0717
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