FFCP PHASE1:Mm9::chr12:73337653..73337671,-: Difference between revisions
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{{FFCP|EntrezGene=104001|HGNC=|MCL_coexpression_id=13|UniProt=|association_with_transcript=1bp_to_ENSMUST00000144181_5end|description=CAGE_peak_2_at_Rtn1_5end|id=chr12:73337653..73337671,-|ontology_enrichment_celltype=CL:0000221!2.29e-16!44;CL:0000133!2.29e-16!44;CL:0002319!2.86e-16!43;CL:0000540!4.38e-16!33;CL:0000047!4.38e-16!33;CL:0000031!4.38e-16!33;CL:0000404!4.38e-16!33;CL:0000117!2.90e-15!23;CL:0000337!2.90e-15!23;CL:0000055!3.67e-11!50;CL:0000393!5.28e-11!39;CL:0000211!5.28e-11!39|ontology_enrichment_celltype_v019_2=CL:0000221,1.89e-17,44;CL:0000133,1.89e-17,44;CL:0002319,2.40e-17,43;CL:0000540,3.79e-17,33;CL:0000047,3.79e-17,33;CL:0000031,3.79e-17,33;CL:0000404,3.79e-17,33;CL:0000117,2.88e-16,23;CL:0000337,2.88e-16,23;CL:0000393,6.11e-12,39;CL:0000211,6.11e-12,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.93e-32!73;UBERON:0005743!1.93e-32!73;UBERON:0000073!2.46e-32!75;UBERON:0001016!2.46e-32!75;UBERON:0004121!2.15e-30!102;UBERON:0000924!2.15e-30!102;UBERON:0006601!2.15e-30!102;UBERON:0002346!3.09e-30!71;UBERON:0003075!3.09e-30!71;UBERON:0007284!3.09e-30!71;UBERON:0000033!1.49e-25!63;UBERON:0001049!2.28e-25!52;UBERON:0005068!2.28e-25!52;UBERON:0006241!2.28e-25!52;UBERON:0007135!2.28e-25!52;UBERON:0000955!2.88e-23!50;UBERON:0006238!2.88e-23!50;UBERON:0002616!9.38e-23!49;UBERON:0003056!1.83e-21!49;UBERON:0002020!1.03e-20!34;UBERON:0003080!7.52e-19!40;UBERON:0002780!3.28e-18!39;UBERON:0001890!3.28e-18!39;UBERON:0006240!3.28e-18!39;UBERON:0002791!3.71e-17!29;UBERON:0003528!3.71e-17!29;UBERON:0001893!3.71e-17!29;UBERON:0000956!3.90e-12!21;UBERON:0001869!3.90e-12!21;UBERON:0000203!3.90e-12!21;UBERON:0007811!3.11e-11!86;UBERON:0002619!6.82e-10!17;UBERON:0000153!2.82e-09!94;UBERON:0002021!1.58e-07!10;UBERON:0000411!1.58e-07!10;UBERON:0001950!1.58e-07!10;UBERON:0000468!2.40e-07!333;UBERON:0003076!4.48e-07!12;UBERON:0003057!4.48e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.03e-34,73;UBERON:0001016,1.34e-34,75;UBERON:0002346,5.35e-31,64;UBERON:0003075,5.35e-31,64;UBERON:0007284,5.35e-31,64;UBERON:0004121,6.67e-30,95;UBERON:0000924,6.67e-30,95;UBERON:0006601,6.67e-30,95;UBERON:0000073,2.66e-28,54;UBERON:0001049,4.07e-27,52;UBERON:0005068,4.07e-27,52;UBERON:0006241,4.07e-27,52;UBERON:0007135,4.07e-27,52;UBERON:0010371,4.90e-25,73;UBERON:0010314,1.24e-23,92;UBERON:0000955,3.92e-23,47;UBERON:0006238,3.92e-23,47;UBERON:0003056,6.36e-23,49;UBERON:0002616,1.36e-22,46;UBERON:0002020,4.05e-22,34;UBERON:0003080,4.07e-20,40;UBERON:0002780,1.98e-19,39;UBERON:0001890,1.98e-19,39;UBERON:0006240,1.98e-19,39;UBERON:0003528,2.67e-18,29;UBERON:0002791,2.67e-18,29;UBERON:0001893,2.67e-18,29;UBERON:0000956,6.58e-13,21;UBERON:0001869,6.58e-13,21;UBERON:0000203,6.58e-13,21;UBERON:0002619,1.68e-10,17;UBERON:0002021,5.76e-08,10;UBERON:0000411,5.76e-08,10;UBERON:0001950,5.76e-08,10;UBERON:0003076,1.76e-07,12;UBERON:0003057,1.76e-07,12|phase1_expression=12.6517589212787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,40.0553896611539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.6478268869608,13.0815093828268,3.95435128922049,2.91644848611425,5.17949760013841,10.062679505548,0,0,0,0.257259436035947,0,0,414.546428301316,382.989468992952,354.94558596346,1.35537812827653,0,0,0,0.7104801149461,26.0652096151012,38.4218305321555,175.442824025944,197.783699655927,171.835493424079,295.363117873533,262.391826650517,200.884910712525,187.282050369634,179.247663388954,135.442533629248,147.861937502647,144.236534727613,435.09286322191,476.284672594145,342.240084455791,172.535093382853,182.897848260296,174.801195456671,287.262870836826,280.756954535831,442.512284389264,3.40767869999328,5.97015324843606,0,0,0,1.61910957491345,0,0,8.56710962803686,0,0,0,10.140726223921,0,0,0,0,0,0,5.25245846707676,0,7.42210695324124,23.9409750937267,40.7983740938269,25.8289356926786,33.9125941243401,28.4564671268406,3.76999773989026,0,0.289198713839823,0,0.485300549842228,0,0,0,85.4919927273718,99.0682923227643,1.53274233125155,0,0,0,224.835749746639,160.582711589338,286.114959760992,273.251831342259,279.752710319382,179.113294410341,165.972812118316,0.305518091550949,0,0,6.73413938836717,7.026503919986,46.9000293044285,49.517085696471,53.1988006960074,69.8734846284137,57.7792878484672,56.6895433586359,27.6812606690747,1.29340795759705,0.756424320671277,0.351902248327898,0.219195732427575,0.278047249225598,0,0,0.398068533636986,0,0,0,3.93538967817454,3.98694301967864,3.96136535214233,2.13070262026689,1.18058539048442,1.85120535464854,0.930135779001631,1.3413670069981,0.817357396570186,0.493679549740441,2.13417703302824,0.56748166682099,0.146199987425332,0.219550115291051,1.07365135008297,236.786482083207,292.454908381926,0,1.85115396664481,3.41261200856374,7.66381017139447,10.9537342123779,9.4791256572971,7.56085349072559,8.75037880117772,2.37264530772256,8.23494773620054,7.28872105520782,8.75408476981064,4.48417400373976,3.59527763461689,2.37751854862164,2.58883655230677,3.034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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=104001 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=1bp_to_ENSMUST00000144181_5end | |||
|cluster_id=chr12:73337653..73337671,- | |||
|description=CAGE_peak_2_at_Rtn1_5end | |||
|id=chr12:73337653..73337671,- | |||
|ontology_enrichment_celltype=CL:0000221!2.29e-16!44;CL:0000133!2.29e-16!44;CL:0002319!2.86e-16!43;CL:0000540!4.38e-16!33;CL:0000047!4.38e-16!33;CL:0000031!4.38e-16!33;CL:0000404!4.38e-16!33;CL:0000117!2.90e-15!23;CL:0000337!2.90e-15!23;CL:0000055!3.67e-11!50;CL:0000393!5.28e-11!39;CL:0000211!5.28e-11!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,1.89e-17,44;CL:0000133,1.89e-17,44;CL:0002319,2.40e-17,43;CL:0000540,3.79e-17,33;CL:0000047,3.79e-17,33;CL:0000031,3.79e-17,33;CL:0000404,3.79e-17,33;CL:0000117,2.88e-16,23;CL:0000337,2.88e-16,23;CL:0000393,6.11e-12,39;CL:0000211,6.11e-12,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.93e-32!73;UBERON:0005743!1.93e-32!73;UBERON:0000073!2.46e-32!75;UBERON:0001016!2.46e-32!75;UBERON:0004121!2.15e-30!102;UBERON:0000924!2.15e-30!102;UBERON:0006601!2.15e-30!102;UBERON:0002346!3.09e-30!71;UBERON:0003075!3.09e-30!71;UBERON:0007284!3.09e-30!71;UBERON:0000033!1.49e-25!63;UBERON:0001049!2.28e-25!52;UBERON:0005068!2.28e-25!52;UBERON:0006241!2.28e-25!52;UBERON:0007135!2.28e-25!52;UBERON:0000955!2.88e-23!50;UBERON:0006238!2.88e-23!50;UBERON:0002616!9.38e-23!49;UBERON:0003056!1.83e-21!49;UBERON:0002020!1.03e-20!34;UBERON:0003080!7.52e-19!40;UBERON:0002780!3.28e-18!39;UBERON:0001890!3.28e-18!39;UBERON:0006240!3.28e-18!39;UBERON:0002791!3.71e-17!29;UBERON:0003528!3.71e-17!29;UBERON:0001893!3.71e-17!29;UBERON:0000956!3.90e-12!21;UBERON:0001869!3.90e-12!21;UBERON:0000203!3.90e-12!21;UBERON:0007811!3.11e-11!86;UBERON:0002619!6.82e-10!17;UBERON:0000153!2.82e-09!94;UBERON:0002021!1.58e-07!10;UBERON:0000411!1.58e-07!10;UBERON:0001950!1.58e-07!10;UBERON:0000468!2.40e-07!333;UBERON:0003076!4.48e-07!12;UBERON:0003057!4.48e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.03e-34,73;UBERON:0001016,1.34e-34,75;UBERON:0002346,5.35e-31,64;UBERON:0003075,5.35e-31,64;UBERON:0007284,5.35e-31,64;UBERON:0004121,6.67e-30,95;UBERON:0000924,6.67e-30,95;UBERON:0006601,6.67e-30,95;UBERON:0000073,2.66e-28,54;UBERON:0001049,4.07e-27,52;UBERON:0005068,4.07e-27,52;UBERON:0006241,4.07e-27,52;UBERON:0007135,4.07e-27,52;UBERON:0010371,4.90e-25,73;UBERON:0010314,1.24e-23,92;UBERON:0000955,3.92e-23,47;UBERON:0006238,3.92e-23,47;UBERON:0003056,6.36e-23,49;UBERON:0002616,1.36e-22,46;UBERON:0002020,4.05e-22,34;UBERON:0003080,4.07e-20,40;UBERON:0002780,1.98e-19,39;UBERON:0001890,1.98e-19,39;UBERON:0006240,1.98e-19,39;UBERON:0003528,2.67e-18,29;UBERON:0002791,2.67e-18,29;UBERON:0001893,2.67e-18,29;UBERON:0000956,6.58e-13,21;UBERON:0001869,6.58e-13,21;UBERON:0000203,6.58e-13,21;UBERON:0002619,1.68e-10,17;UBERON:0002021,5.76e-08,10;UBERON:0000411,5.76e-08,10;UBERON:0001950,5.76e-08,10;UBERON:0003076,1.76e-07,12;UBERON:0003057,1.76e-07,12 | |||
|phase1_expression=12.6517589212787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,40.0553896611539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.6478268869608,13.0815093828268,3.95435128922049,2.91644848611425,5.17949760013841,10.062679505548,0,0,0,0.257259436035947,0,0,414.546428301316,382.989468992952,354.94558596346,1.35537812827653,0,0,0,0.7104801149461,26.0652096151012,38.4218305321555,175.442824025944,197.783699655927,171.835493424079,295.363117873533,262.391826650517,200.884910712525,187.282050369634,179.247663388954,135.442533629248,147.861937502647,144.236534727613,435.09286322191,476.284672594145,342.240084455791,172.535093382853,182.897848260296,174.801195456671,287.262870836826,280.756954535831,442.512284389264,3.40767869999328,5.97015324843606,0,0,0,1.61910957491345,0,0,8.56710962803686,0,0,0,10.140726223921,0,0,0,0,0,0,5.25245846707676,0,7.42210695324124,23.9409750937267,40.7983740938269,25.8289356926786,33.9125941243401,28.4564671268406,3.76999773989026,0,0.289198713839823,0,0.485300549842228,0,0,0,85.4919927273718,99.0682923227643,1.53274233125155,0,0,0,224.835749746639,160.582711589338,286.114959760992,273.251831342259,279.752710319382,179.113294410341,165.972812118316,0.305518091550949,0,0,6.73413938836717,7.026503919986,46.9000293044285,49.517085696471,53.1988006960074,69.8734846284137,57.7792878484672,56.6895433586359,27.6812606690747,1.29340795759705,0.756424320671277,0.351902248327898,0.219195732427575,0.278047249225598,0,0,0.398068533636986,0,0,0,3.93538967817454,3.98694301967864,3.96136535214233,2.13070262026689,1.18058539048442,1.85120535464854,0.930135779001631,1.3413670069981,0.817357396570186,0.493679549740441,2.13417703302824,0.56748166682099,0.146199987425332,0.219550115291051,1.07365135008297,236.786482083207,292.454908381926,0,1.85115396664481,3.41261200856374,7.66381017139447,10.9537342123779,9.4791256572971,7.56085349072559,8.75037880117772,2.37264530772256,8.23494773620054,7.28872105520782,8.75408476981064,4.48417400373976,3.59527763461689,2.37751854862164,2.58883655230677,3.03468641524931,4.56994050438915,0,1.83286195060783,1.16371492300575,1.19230893813542,0.126473074248515,0,0,0,0,0.166845105716094,0.196558995113203,0,0,0,0,0.287696137450811,0.162135226775035,0,0,0,0,0,0,0,0.369506380333209,3.22135400009824,2.28150967018836,0.169745085775188,0.234690248288502,1.00503754465089,0.952174563544055,0.585400943573396,2.04925687338048,1.7717175171902,2.55127629851979,0.163863314715738,0.345369963731791,0.144649058581512,0,0,0,0,151.880858128451,150.968652330758,0,0,26.1871822115493,30.4542220551378,38.1299413987054,6.21318874676635,10.2487390077901,11.6061377623421,20.2405350837447,30.9791209385991,28.0654322342032,93.8258243951677,0,0.534196811001766,0.162886959353576,0,0,2.18502572539483,1.81394134178851,2.07465587731488,2.06711325016541,2.76691633149535,3.6179961043551,1.09060118843252,1.78248689192361,2.21225730555071,0,0,4.76615448055303,18.9064148732876,10.7367707539686,6.85878512101095,2.12808280370728,17.4801441250029,26.3278432963394,23.7482660309387,0,0.21183207086382,8.15955072803359,0,0,0.0603129249281559,0.119372344003136,0,2.62332752966866,147.042264494334,0,0.619160603889667,0,0.188368457004691,0,0,0,0,0,2.86401185404534,5.53587988766987,10.775931757723,8.4244165841005,8.57262013659322,7.64268973111622,7.68726774393478,7.19085064810423,2.35580347785627,2.46268449254406,0.621339313086926,0,0,0,0,0.258319646955462,0.337912250981556,0.58678619322877,0.13020438484395,0.838874755405687,0,0,0,1.41907650703115,0.410843828659309,0,0.716106782669926,0,0,0.295379054349154,0,0,0,0,0,0,0.680191150845634,0,0,0,4.82973985080476,0,0,1.71494703263253,0,307.789754226301,288.163598053493,293.89539839441,253.99900350397,193.193270575321,185.071504860477,220.732357575801,246.325698163649,223.852350038197,209.175165947735,9.75601067291261,74.2186264525918,58.561626773668,41.8143553357466,33.3284928578492,24.6350301323019,53.5614614001893,47.8001332794235,63.2210842895876,52.5610200468699,57.5398010750844,51.1177385156267,51.3155460934956,55.7018825922363,54.6785664457438,39.5323763764951,57.3627413427035,54.0145817298374,46.5657067907736,36.9469289537337,40.458571781479,36.7374918749829,46.4950570397276,42.5865000732723,47.1487995880806,51.0226085586809,43.7197855165926,43.1434326758062,49.5685015537395,49.9416621775387,47.8099123040422,52.9954115180531,43.3784905759871,52.0587786384846,35.6877230315112,129.152068793918,42.1076895201735,47.4865029446739,23.3371765123989,12.3531194706929,7.18790290423307 | |||
|short_description=p2@Rtn1 | |||
}} |
Latest revision as of 18:14, 26 September 2015
Short description: | p2@Rtn1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Rtn1_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | 1bp_to_ENSMUST00000144181_5end |
EntrezGene: | Rtn1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 1.89e-17 | 44 |
neurectodermal cell | 1.89e-17 | 44 |
neural cell | 2.40e-17 | 43 |
neuron | 3.79e-17 | 33 |
neuronal stem cell | 3.79e-17 | 33 |
neuroblast | 3.79e-17 | 33 |
electrically signaling cell | 3.79e-17 | 33 |
CNS neuron (sensu Vertebrata) | 2.88e-16 | 23 |
neuroblast (sensu Vertebrata) | 2.88e-16 | 23 |
electrically responsive cell | 6.11e-12 | 39 |
electrically active cell | 6.11e-12 | 39 |