FFCP PHASE1:Mm9::chr12:50485948..50485959,+: Difference between revisions
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{{FFCP|EntrezGene=15228|HGNC=|MCL_coexpression_id=76|UniProt=E9PYS1,Q8C9D9|association_with_transcript=-201bp_to_ENSMUST00000110746,uc007nmg.1_5end|description=CAGE_peak_7_at_Foxg1_5end|id=chr12:50485948..50485959,+|ontology_enrichment_celltype=CL:0002609!1.26e-08!6|ontology_enrichment_celltype_v019_2=CL:0002609,5.11e-46,6;CL:0002608,2.04e-15,3;CL:0000117,2.86e-12,23;CL:0000337,2.86e-12,23;CL:0002319,2.60e-09,43;CL:0000221,4.22e-09,44;CL:0000133,4.22e-09,44;CL:0000540,1.30e-08,33;CL:0000047,1.30e-08,33;CL:0000031,1.30e-08,33;CL:0000404,1.30e-08,33;CL:0000393,2.62e-07,39;CL:0000211,2.62e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000956!1.20e-12!21;UBERON:0001869!1.20e-12!21;UBERON:0000203!1.20e-12!21;UBERON:0002791!1.96e-11!29;UBERON:0003528!1.96e-11!29;UBERON:0001893!1.96e-11!29;UBERON:0001954!1.60e-09!7;UBERON:0003022!1.60e-09!7;UBERON:0002421!1.60e-09!7;UBERON:0000349!1.60e-09!7;UBERON:0002600!1.60e-09!7;UBERON:0002020!3.77e-09!34;UBERON:0000955!1.67e-08!50;UBERON:0006238!1.67e-08!50;UBERON:0002616!1.06e-07!49;UBERON:0002619!1.67e-07!17;UBERON:0002780!1.79e-07!39;UBERON:0001890!1.79e-07!39;UBERON:0006240!1.79e-07!39;UBERON:0003080!3.44e-07!40|ontology_enrichment_uberon_v019_2=UBERON:0000956,5.39e-19,21;UBERON:0001869,5.39e-19,21;UBERON:0000203,5.39e-19,21;UBERON:0003528,1.59e-18,29;UBERON:0002791,1.59e-18,29;UBERON:0001893,1.59e-18,29;UBERON:0002020,8.22e-16,34;UBERON:0001954,1.23e-14,7;UBERON:0003022,1.23e-14,7;UBERON:0002421,1.23e-14,7;UBERON:0000349,1.23e-14,7;UBERON:0002600,1.23e-14,7;UBERON:0002780,8.64e-14,39;UBERON:0001890,8.64e-14,39;UBERON:0006240,8.64e-14,39;UBERON:0003080,1.91e-13,40;UBERON:0002616,1.08e-11,46;UBERON:0000955,1.92e-11,47;UBERON:0006238,1.92e-11,47;UBERON:0003056,5.65e-11,49;UBERON:0001049,2.44e-10,52;UBERON:0005068,2.44e-10,52;UBERON:0006241,2.44e-10,52;UBERON:0007135,2.44e-10,52;UBERON:0000073,5.93e-10,54;UBERON:0001017,1.46e-09,73;UBERON:0001016,2.65e-09,75;UBERON:0002346,2.20e-08,64;UBERON:0003075,2.20e-08,64;UBERON:0007284,2.20e-08,64;UBERON:0010371,2.46e-07,73;UBERON:0004121,2.60e-07,95;UBERON:0000924,2.60e-07,95;UBERON:0006601,2.60e-07,95|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0.367093504323363,0,0.218025156380447,0.219686182734472,0.388859798148567,0,0,0,0,0,0.257259436035947,0,0,0,0,0,0.338844532069132,0,0,0,0,0,1.15265491596466,3.7328260431052,5.13022565660425,2.10324961351382,0,0,1.10241719293459,2.01275489138296,0,0,0.127687338085188,0.153606533256243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170430322578058,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.915001205637253,1.00523481690292,0.173824320192276,0.511430914660661,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,1.64647379806855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163934945376675,0,0,0,0,0,0,0.283076530788832,0,0,0,0.321321316421807,0,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0.205421914329655,0,0,0.198681354781265,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0,0,0.343706364687375,0,0,0.675022500231806,0,0,0,0.103787347584177,0,0.341467211508268,0,0.209613162627982,0,0,0,0,0,0,0.377252682772152,0,0.0640251524048693,0.0574354689556133,0.476293691283074,0.231768651889711,0,0,0.147198920134397,0,0.177475806159338,0.238436189947321,0.290692833264657,0.0941093804153306,0.0846146078916765,0.182927972872773,0,0.271608227691724,0,0.355905054372522,0.0985044823755635,0.409231043169689,0.154936841185966,0.192906610981141,0.249810577937946,0,0,0,0,0|short_description=p7@Foxg1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=15228 | |||
|HGNC= | |||
|MCL_coexpression_id=76 | |||
|TSSclassifier=NA | |||
|UniProt=E9PYS1,Q8C9D9 | |||
|association_with_transcript=-201bp_to_ENSMUST00000110746,uc007nmg.1_5end | |||
|cluster_id=chr12:50485948..50485959,+ | |||
|description=CAGE_peak_7_at_Foxg1_5end | |||
|id=chr12:50485948..50485959,+ | |||
|ontology_enrichment_celltype=CL:0002609!1.26e-08!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002609,5.11e-46,6;CL:0002608,2.04e-15,3;CL:0000117,2.86e-12,23;CL:0000337,2.86e-12,23;CL:0002319,2.60e-09,43;CL:0000221,4.22e-09,44;CL:0000133,4.22e-09,44;CL:0000540,1.30e-08,33;CL:0000047,1.30e-08,33;CL:0000031,1.30e-08,33;CL:0000404,1.30e-08,33;CL:0000393,2.62e-07,39;CL:0000211,2.62e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000956!1.20e-12!21;UBERON:0001869!1.20e-12!21;UBERON:0000203!1.20e-12!21;UBERON:0002791!1.96e-11!29;UBERON:0003528!1.96e-11!29;UBERON:0001893!1.96e-11!29;UBERON:0001954!1.60e-09!7;UBERON:0003022!1.60e-09!7;UBERON:0002421!1.60e-09!7;UBERON:0000349!1.60e-09!7;UBERON:0002600!1.60e-09!7;UBERON:0002020!3.77e-09!34;UBERON:0000955!1.67e-08!50;UBERON:0006238!1.67e-08!50;UBERON:0002616!1.06e-07!49;UBERON:0002619!1.67e-07!17;UBERON:0002780!1.79e-07!39;UBERON:0001890!1.79e-07!39;UBERON:0006240!1.79e-07!39;UBERON:0003080!3.44e-07!40 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000956,5.39e-19,21;UBERON:0001869,5.39e-19,21;UBERON:0000203,5.39e-19,21;UBERON:0003528,1.59e-18,29;UBERON:0002791,1.59e-18,29;UBERON:0001893,1.59e-18,29;UBERON:0002020,8.22e-16,34;UBERON:0001954,1.23e-14,7;UBERON:0003022,1.23e-14,7;UBERON:0002421,1.23e-14,7;UBERON:0000349,1.23e-14,7;UBERON:0002600,1.23e-14,7;UBERON:0002780,8.64e-14,39;UBERON:0001890,8.64e-14,39;UBERON:0006240,8.64e-14,39;UBERON:0003080,1.91e-13,40;UBERON:0002616,1.08e-11,46;UBERON:0000955,1.92e-11,47;UBERON:0006238,1.92e-11,47;UBERON:0003056,5.65e-11,49;UBERON:0001049,2.44e-10,52;UBERON:0005068,2.44e-10,52;UBERON:0006241,2.44e-10,52;UBERON:0007135,2.44e-10,52;UBERON:0000073,5.93e-10,54;UBERON:0001017,1.46e-09,73;UBERON:0001016,2.65e-09,75;UBERON:0002346,2.20e-08,64;UBERON:0003075,2.20e-08,64;UBERON:0007284,2.20e-08,64;UBERON:0010371,2.46e-07,73;UBERON:0004121,2.60e-07,95;UBERON:0000924,2.60e-07,95;UBERON:0006601,2.60e-07,95 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0.367093504323363,0,0.218025156380447,0.219686182734472,0.388859798148567,0,0,0,0,0,0.257259436035947,0,0,0,0,0,0.338844532069132,0,0,0,0,0,1.15265491596466,3.7328260431052,5.13022565660425,2.10324961351382,0,0,1.10241719293459,2.01275489138296,0,0,0.127687338085188,0.153606533256243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170430322578058,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.915001205637253,1.00523481690292,0.173824320192276,0.511430914660661,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,1.64647379806855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163934945376675,0,0,0,0,0,0,0.283076530788832,0,0,0,0.321321316421807,0,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0.205421914329655,0,0,0.198681354781265,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0,0,0.343706364687375,0,0,0.675022500231806,0,0,0,0.103787347584177,0,0.341467211508268,0,0.209613162627982,0,0,0,0,0,0,0.377252682772152,0,0.0640251524048693,0.0574354689556133,0.476293691283074,0.231768651889711,0,0,0.147198920134397,0,0.177475806159338,0.238436189947321,0.290692833264657,0.0941093804153306,0.0846146078916765,0.182927972872773,0,0.271608227691724,0,0.355905054372522,0.0985044823755635,0.409231043169689,0.154936841185966,0.192906610981141,0.249810577937946,0,0,0,0,0 | |||
|short_description=p7@Foxg1 | |||
}} |
Latest revision as of 15:37, 26 September 2015
Short description: | p7@Foxg1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Foxg1_5end |
Coexpression cluster: | MCL_coexpression_mm9:76 |
Association with transcript: | -201bp_to_ENSMUST00000110746, uc007nmg.1_5end |
EntrezGene: | Foxg1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of cerebral cortex | 5.11e-46 | 6 |
hippocampal neuron | 2.04e-15 | 3 |
CNS neuron (sensu Vertebrata) | 2.86e-12 | 23 |
neuroblast (sensu Vertebrata) | 2.86e-12 | 23 |
neural cell | 2.60e-09 | 43 |
ectodermal cell | 4.22e-09 | 44 |
neurectodermal cell | 4.22e-09 | 44 |
neuron | 1.30e-08 | 33 |
neuronal stem cell | 1.30e-08 | 33 |
neuroblast | 1.30e-08 | 33 |
electrically signaling cell | 1.30e-08 | 33 |
electrically responsive cell | 2.62e-07 | 39 |
electrically active cell | 2.62e-07 | 39 |
Ontology term | p-value | n |
---|---|---|
cerebral cortex | 5.39e-19 | 21 |
cerebral hemisphere | 5.39e-19 | 21 |
pallium | 5.39e-19 | 21 |
brain grey matter | 1.59e-18 | 29 |
regional part of telencephalon | 1.59e-18 | 29 |
telencephalon | 1.59e-18 | 29 |
gray matter | 8.22e-16 | 34 |
Ammon's horn | 1.23e-14 | 7 |
lobe parts of cerebral cortex | 1.23e-14 | 7 |
hippocampal formation | 1.23e-14 | 7 |
limbic system | 1.23e-14 | 7 |
limbic lobe | 1.23e-14 | 7 |
regional part of forebrain | 8.64e-14 | 39 |
forebrain | 8.64e-14 | 39 |
future forebrain | 8.64e-14 | 39 |
anterior neural tube | 1.91e-13 | 40 |
regional part of brain | 1.08e-11 | 46 |
brain | 1.92e-11 | 47 |
future brain | 1.92e-11 | 47 |
pre-chordal neural plate | 5.65e-11 | 49 |
neural tube | 2.44e-10 | 52 |
neural rod | 2.44e-10 | 52 |
future spinal cord | 2.44e-10 | 52 |
neural keel | 2.44e-10 | 52 |
regional part of nervous system | 5.93e-10 | 54 |
central nervous system | 1.46e-09 | 73 |
nervous system | 2.65e-09 | 75 |
neurectoderm | 2.20e-08 | 64 |
neural plate | 2.20e-08 | 64 |
presumptive neural plate | 2.20e-08 | 64 |
ecto-epithelium | 2.46e-07 | 73 |
ectoderm-derived structure | 2.60e-07 | 95 |
ectoderm | 2.60e-07 | 95 |
presumptive ectoderm | 2.60e-07 | 95 |