FFCP PHASE1:Mm9::chr12:12268970..12268997,+: Difference between revisions
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{{FFCP|EntrezGene=76820|HGNC=|MCL_coexpression_id=2|UniProt=Q8BHZ0,F7BT94|association_with_transcript=25bp_to_ENSMUST00000069005,ENSMUST00000069066,ENSMUST00000167108,NM_001146119,NM_029758,uc007nbc.2,uc007nbd.2_5end|description=CAGE_peak_1_at_Fam49a_5end|id=chr12:12268970..12268997,+|ontology_enrichment_celltype=CL:0000540!3.49e-12!33;CL:0000047!3.49e-12!33;CL:0000031!3.49e-12!33;CL:0000404!3.49e-12!33;CL:0000393!3.42e-09!39;CL:0000211!3.42e-09!39;CL:0000117!1.16e-08!23;CL:0000337!1.16e-08!23;CL:0000221!7.82e-07!44;CL:0000133!7.82e-07!44|ontology_enrichment_celltype_v019_2=CL:0000540,3.48e-12,33;CL:0000047,3.48e-12,33;CL:0000031,3.48e-12,33;CL:0000404,3.48e-12,33;CL:0000393,3.80e-09,39;CL:0000211,3.80e-09,39;CL:0000117,1.16e-08,23;CL:0000337,1.16e-08,23;CL:0000221,7.80e-07,44;CL:0000133,7.80e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!3.79e-16!73;UBERON:0005743!3.79e-16!73;UBERON:0000073!2.14e-15!75;UBERON:0001016!2.14e-15!75;UBERON:0002020!4.02e-15!34;UBERON:0004121!2.78e-13!102;UBERON:0000924!2.78e-13!102;UBERON:0006601!2.78e-13!102;UBERON:0002791!3.94e-13!29;UBERON:0003528!3.94e-13!29;UBERON:0001893!3.94e-13!29;UBERON:0001049!1.19e-12!52;UBERON:0005068!1.19e-12!52;UBERON:0006241!1.19e-12!52;UBERON:0007135!1.19e-12!52;UBERON:0000955!2.82e-12!50;UBERON:0006238!2.82e-12!50;UBERON:0002616!9.63e-12!49;UBERON:0000956!7.17e-11!21;UBERON:0001869!7.17e-11!21;UBERON:0000203!7.17e-11!21;UBERON:0002346!3.24e-10!71;UBERON:0003075!3.24e-10!71;UBERON:0007284!3.24e-10!71;UBERON:0003080!3.30e-10!40;UBERON:0002780!7.95e-10!39;UBERON:0001890!7.95e-10!39;UBERON:0006240!7.95e-10!39;UBERON:0000033!2.03e-09!63;UBERON:0000025!3.49e-09!114;UBERON:0004111!3.56e-09!122;UBERON:0002619!1.94e-08!17;UBERON:0002021!3.37e-08!10;UBERON:0000411!3.37e-08!10;UBERON:0001950!3.37e-08!10;UBERON:0003056!1.91e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.77e-16,73;UBERON:0001016,2.13e-15,75;UBERON:0002020,4.00e-15,34;UBERON:0004121,6.88e-14,95;UBERON:0000924,6.88e-14,95;UBERON:0006601,6.88e-14,95;UBERON:0000073,1.04e-13,54;UBERON:0010314,2.83e-13,92;UBERON:0003528,3.93e-13,29;UBERON:0002791,3.93e-13,29;UBERON:0001893,3.93e-13,29;UBERON:0010371,4.56e-13,73;UBERON:0001049,1.18e-12,52;UBERON:0005068,1.18e-12,52;UBERON:0006241,1.18e-12,52;UBERON:0007135,1.18e-12,52;UBERON:0002346,5.38e-11,64;UBERON:0003075,5.38e-11,64;UBERON:0007284,5.38e-11,64;UBERON:0000955,6.84e-11,47;UBERON:0006238,6.84e-11,47;UBERON:0000956,7.15e-11,21;UBERON:0001869,7.15e-11,21;UBERON:0000203,7.15e-11,21;UBERON:0002616,2.24e-10,46;UBERON:0003080,3.29e-10,40;UBERON:0002780,7.93e-10,39;UBERON:0001890,7.93e-10,39;UBERON:0006240,7.93e-10,39;UBERON:0000025,3.99e-09,114;UBERON:0004111,4.05e-09,122;UBERON:0002619,1.94e-08,17;UBERON:0002021,3.36e-08,10;UBERON:0000411,3.36e-08,10;UBERON:0001950,3.36e-08,10;UBERON:0003056,1.90e-07,49|phase1_expression=27.3854528549198,1.39590163055744,3.18499467572675,0,0,3.69334398206158,1.40167584357315,12.1375924035082,15.9091256031383,4.91535505276186,2.91070545983358,0.717949430958028,51.8738211691553,14.8614684112296,21.9852442798337,20.0450514715928,11.1929900500503,42.429661240683,52.2405992037865,35.2243410992365,12.5013636522073,2.38298282882125,0.783599367416806,2.23989391910769,1.37645568640302,3.44539178469012,0.86152399231815,3.44753972297422,0.190023419456374,0,2.66076612786366,0,0,0,4.04392267651784,4.82080471539628,4.90006455029686,2.92972141515835,10.1573594788094,10.470474879476,3.52938892818609,4.78131839470912,1.94204141212461,1.51076181570693,0.811015449756117,0.183546752161682,8.60630478782843,3.70642765846759,3.73466510648602,5.8328969722285,3.49966054063406,7.18762821824858,27.1807821813533,58.7543335029189,59.8246962473586,7.97504251711436,22.0630748752843,36.6127185516984,15.578367486189,22.2176211294254,12.6766280701236,1.69422266034566,1.77858959222228,7.64914759689189,7.9109309005358,7.104801149461,6.5912024314049,9.98967593836042,156.052866524259,132.035807688393,141.338374028129,23.1377297367081,29.154647405613,69.9422463517388,52.71500906003,65.2645338493115,39.6417171597799,68.057351199405,53.7622866396852,21.101806036831,32.8440640532651,27.0874952689515,18.1468949350898,29.2636557216474,42.7835093775068,68.9430890008382,70.7587253571542,46.9726603479757,4.24066682665831,14.8875973410367,26.957397449256,18.9293252935905,0.679971333707751,0.539703191637817,3.24888208723835,1.34408066129201,3.5111105032938,0,0,0,23.0983208433756,0,0,0,5.41227602528035,2.78695852022608,4.04419556011827,3.9964357901671,151.737599817243,23.3054158331775,6.93941307064543,9.74289530598852,8.99400439298628,14.9215414147096,15.9920641704559,17.9703225601436,7.41584903203122,26.4616823163438,18.5768215909474,7.44127509758082,11.4837589599405,11.1521308221101,11.1835056730873,30.7419836862124,32.8831329697124,7.40825460104915,9.94465533399138,7.19883277192089,9.65733725755292,36.3991253753719,116.205153115931,63.0784847606579,123.762915976901,139.36492424503,61.920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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=76820 | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BHZ0,F7BT94 | |||
|association_with_transcript=25bp_to_ENSMUST00000069005,ENSMUST00000069066,ENSMUST00000167108,NM_001146119,NM_029758,uc007nbc.2,uc007nbd.2_5end | |||
|cluster_id=chr12:12268970..12268997,+ | |||
|description=CAGE_peak_1_at_Fam49a_5end | |||
|id=chr12:12268970..12268997,+ | |||
|ontology_enrichment_celltype=CL:0000540!3.49e-12!33;CL:0000047!3.49e-12!33;CL:0000031!3.49e-12!33;CL:0000404!3.49e-12!33;CL:0000393!3.42e-09!39;CL:0000211!3.42e-09!39;CL:0000117!1.16e-08!23;CL:0000337!1.16e-08!23;CL:0000221!7.82e-07!44;CL:0000133!7.82e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,3.48e-12,33;CL:0000047,3.48e-12,33;CL:0000031,3.48e-12,33;CL:0000404,3.48e-12,33;CL:0000393,3.80e-09,39;CL:0000211,3.80e-09,39;CL:0000117,1.16e-08,23;CL:0000337,1.16e-08,23;CL:0000221,7.80e-07,44;CL:0000133,7.80e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.79e-16!73;UBERON:0005743!3.79e-16!73;UBERON:0000073!2.14e-15!75;UBERON:0001016!2.14e-15!75;UBERON:0002020!4.02e-15!34;UBERON:0004121!2.78e-13!102;UBERON:0000924!2.78e-13!102;UBERON:0006601!2.78e-13!102;UBERON:0002791!3.94e-13!29;UBERON:0003528!3.94e-13!29;UBERON:0001893!3.94e-13!29;UBERON:0001049!1.19e-12!52;UBERON:0005068!1.19e-12!52;UBERON:0006241!1.19e-12!52;UBERON:0007135!1.19e-12!52;UBERON:0000955!2.82e-12!50;UBERON:0006238!2.82e-12!50;UBERON:0002616!9.63e-12!49;UBERON:0000956!7.17e-11!21;UBERON:0001869!7.17e-11!21;UBERON:0000203!7.17e-11!21;UBERON:0002346!3.24e-10!71;UBERON:0003075!3.24e-10!71;UBERON:0007284!3.24e-10!71;UBERON:0003080!3.30e-10!40;UBERON:0002780!7.95e-10!39;UBERON:0001890!7.95e-10!39;UBERON:0006240!7.95e-10!39;UBERON:0000033!2.03e-09!63;UBERON:0000025!3.49e-09!114;UBERON:0004111!3.56e-09!122;UBERON:0002619!1.94e-08!17;UBERON:0002021!3.37e-08!10;UBERON:0000411!3.37e-08!10;UBERON:0001950!3.37e-08!10;UBERON:0003056!1.91e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.77e-16,73;UBERON:0001016,2.13e-15,75;UBERON:0002020,4.00e-15,34;UBERON:0004121,6.88e-14,95;UBERON:0000924,6.88e-14,95;UBERON:0006601,6.88e-14,95;UBERON:0000073,1.04e-13,54;UBERON:0010314,2.83e-13,92;UBERON:0003528,3.93e-13,29;UBERON:0002791,3.93e-13,29;UBERON:0001893,3.93e-13,29;UBERON:0010371,4.56e-13,73;UBERON:0001049,1.18e-12,52;UBERON:0005068,1.18e-12,52;UBERON:0006241,1.18e-12,52;UBERON:0007135,1.18e-12,52;UBERON:0002346,5.38e-11,64;UBERON:0003075,5.38e-11,64;UBERON:0007284,5.38e-11,64;UBERON:0000955,6.84e-11,47;UBERON:0006238,6.84e-11,47;UBERON:0000956,7.15e-11,21;UBERON:0001869,7.15e-11,21;UBERON:0000203,7.15e-11,21;UBERON:0002616,2.24e-10,46;UBERON:0003080,3.29e-10,40;UBERON:0002780,7.93e-10,39;UBERON:0001890,7.93e-10,39;UBERON:0006240,7.93e-10,39;UBERON:0000025,3.99e-09,114;UBERON:0004111,4.05e-09,122;UBERON:0002619,1.94e-08,17;UBERON:0002021,3.36e-08,10;UBERON:0000411,3.36e-08,10;UBERON:0001950,3.36e-08,10;UBERON:0003056,1.90e-07,49 | |||
|phase1_expression=27.3854528549198,1.39590163055744,3.18499467572675,0,0,3.69334398206158,1.40167584357315,12.1375924035082,15.9091256031383,4.91535505276186,2.91070545983358,0.717949430958028,51.8738211691553,14.8614684112296,21.9852442798337,20.0450514715928,11.1929900500503,42.429661240683,52.2405992037865,35.2243410992365,12.5013636522073,2.38298282882125,0.783599367416806,2.23989391910769,1.37645568640302,3.44539178469012,0.86152399231815,3.44753972297422,0.190023419456374,0,2.66076612786366,0,0,0,4.04392267651784,4.82080471539628,4.90006455029686,2.92972141515835,10.1573594788094,10.470474879476,3.52938892818609,4.78131839470912,1.94204141212461,1.51076181570693,0.811015449756117,0.183546752161682,8.60630478782843,3.70642765846759,3.73466510648602,5.8328969722285,3.49966054063406,7.18762821824858,27.1807821813533,58.7543335029189,59.8246962473586,7.97504251711436,22.0630748752843,36.6127185516984,15.578367486189,22.2176211294254,12.6766280701236,1.69422266034566,1.77858959222228,7.64914759689189,7.9109309005358,7.104801149461,6.5912024314049,9.98967593836042,156.052866524259,132.035807688393,141.338374028129,23.1377297367081,29.154647405613,69.9422463517388,52.71500906003,65.2645338493115,39.6417171597799,68.057351199405,53.7622866396852,21.101806036831,32.8440640532651,27.0874952689515,18.1468949350898,29.2636557216474,42.7835093775068,68.9430890008382,70.7587253571542,46.9726603479757,4.24066682665831,14.8875973410367,26.957397449256,18.9293252935905,0.679971333707751,0.539703191637817,3.24888208723835,1.34408066129201,3.5111105032938,0,0,0,23.0983208433756,0,0,0,5.41227602528035,2.78695852022608,4.04419556011827,3.9964357901671,151.737599817243,23.3054158331775,6.93941307064543,9.74289530598852,8.99400439298628,14.9215414147096,15.9920641704559,17.9703225601436,7.41584903203122,26.4616823163438,18.5768215909474,7.44127509758082,11.4837589599405,11.1521308221101,11.1835056730873,30.7419836862124,32.8831329697124,7.40825460104915,9.94465533399138,7.19883277192089,9.65733725755292,36.3991253753719,116.205153115931,63.0784847606579,123.762915976901,139.36492424503,61.9208372787489,81.2828727969466,7.23059483337246,14.3068016201607,3.0326731012041,8.83855794723191,4.03373373184381,5.51765050640335,9.72335500948886,10.0972227949929,10.0013653752452,12.0426897067759,13.493048336601,12.6764651662118,3.44908788692548,6.99692496620931,8.62160508403349,7.67185063496512,7.22922847986555,11.8405736617537,13.9931852757402,6.96619933864726,7.72434506044558,4.88961023517959,7.95657798307659,45.5676699578104,35.4134350571455,32.7712951859047,32.1972840395886,23.8084720414359,26.9967447552912,21.6256568617879,20.3887785063711,19.8501082024188,19.9117418395311,14.4467368389604,18.4026197669093,17.5439984910399,18.8813099150304,24.2913617956273,123.019619910014,149.005878725204,5.94753809370836,4.7601101999438,10.4511242762265,9.52170354627798,11.4692040576663,8.67239155880373,10.0070119730192,8.56015317506516,7.59246498471219,5.43506550589236,9.0480675168097,8.95304124185179,9.94316844307513,8.08937467788799,10.8069024937347,13.541606581297,3.03468641524931,6.740662243974,13.5249282807697,7.127796474586,6.20647958936402,6.94344616914154,10.1810824770054,12.3992524302866,13.9728867778824,13.2034965396327,7.11486305009157,5.5058884886311,5.89676985339609,3.14806957338795,6.28866376304359,5.54707467430559,8.14802725700543,4.89083433666378,9.56597837972709,5.76578967694971,20.1275489138296,12.6527922207291,11.8574315783533,11.1134706296729,7.3552939543984,7.71909634181387,50.9918804859829,10.2325362356062,14.8298128562244,11.0334305753872,16.1936271319066,26.9685074481323,42.1337244368244,40.78293240228,30.7388531007072,27.2401568267993,28.7018583583477,53.7471672267621,48.3517949224508,66.8278650646584,18.0949540727127,21.7562273527484,12.7858710984949,16.0043312856745,30.1835109177049,31.2955203201182,0,20.4501451035542,40.3850520852809,43.3387006169269,38.1299413987054,27.9593493604486,34.5337944827711,29.7230357328274,34.8137203440409,29.5178416490425,35.1806122372406,107.963962317727,23.9878744001974,5.87616492101942,9.77321756121457,35.9634868080127,23.8941249011933,2.6705869977048,3.93020624054176,3.77210159511796,5.61073596473468,8.9156192903739,8.26970538138308,10.5424781548477,8.19943970284859,16.7499481705982,13.7044191147498,14.4389760547462,19.7454971337197,4.14140516272013,2.97524972700335,4.50107773566344,9.3990323830405,10.5237602385222,11.8475294833527,9.74287837166718,15.0189893160775,7.41412248023371,7.27743713581374,71.0659750177779,15.5005849628069,27.7439454669517,67.6841190497784,119.33043411466,7.57850175237612,33.3765543618917,36.7372393715383,13.2087595496462,17.963869154862,19.0252141574738,26.5186801778789,33.1728351149458,15.6380155594347,22.6721352764326,19.0715963850105,8.59203556213602,6.95939185878498,12.4024874947378,11.1245501046455,8.57262013659322,12.6650286972783,13.0818415993276,13.7204736504058,11.5172614472973,13.9984171155136,11.8054469486516,1.12738587736838,6.13017838780313,6.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| |||
|short_description=p1@Fam49a | |||
}} |
Latest revision as of 11:06, 26 September 2015
Short description: | p1@Fam49a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Fam49a_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | 25bp_to_ENSMUST00000069005, ENSMUST00000069066, ENSMUST00000167108, NM_001146119, NM_029758, uc007nbc.2, uc007nbd.2_5end |
EntrezGene: | Fam49a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 3.48e-12 | 33 |
neuronal stem cell | 3.48e-12 | 33 |
neuroblast | 3.48e-12 | 33 |
electrically signaling cell | 3.48e-12 | 33 |
electrically responsive cell | 3.80e-09 | 39 |
electrically active cell | 3.80e-09 | 39 |
CNS neuron (sensu Vertebrata) | 1.16e-08 | 23 |
neuroblast (sensu Vertebrata) | 1.16e-08 | 23 |
ectodermal cell | 7.80e-07 | 44 |
neurectodermal cell | 7.80e-07 | 44 |