FFCP PHASE1:Hg19::chr3:162435939..162435944,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr3:162435939..162435944,+ | |||
|coexpression_cluster_id=C130 | |||
|description=CAGE_peak_at_chr3:162435939..162435944,+ | |||
|id=chr3:162435939..162435944,+ | |||
|ontology_enrichment_celltype=CL:0002322!1.45e-11!5;CL:0000540!4.71e-10!6;CL:0000031!4.71e-10!6;CL:0000404!4.71e-10!6;CL:0000066!1.79e-08!254;CL:0000047!1.21e-07!8;CL:1001319!5.50e-07!1;CL:1000600!5.50e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0000540;6.20e-24;6!CL:0000404;6.20e-24;6!CL:0002149;3.39e-11;6!CL:0002255;3.39e-11;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,6.20e-24,6;CL:0000031,6.20e-24,6;CL:0000404,6.20e-24,6;CL:0000047,3.94e-18,8;CL:0002149,3.39e-11,6;CL:0002255,3.39e-11,6 | |||
|ontology_enrichment_development_v019=CL:0000031;6.20e-24;6!UBERON:0008947;5.05e-13;29!UBERON:0005795;4.52e-07;10 | |||
|ontology_enrichment_disease=DOID:305!4.68e-18!106;DOID:0050687!9.36e-14!143;DOID:162!1.69e-07!235;DOID:14566!2.98e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:3001;3.39e-11;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3001,3.39e-11,6 | |||
|ontology_enrichment_uberon=UBERON:0001737!9.37e-42!9;UBERON:0001557!4.98e-24!19;UBERON:0008947!2.43e-11!38;UBERON:0003258!2.43e-11!38;UBERON:0000072!3.37e-11!46;UBERON:0000065!1.73e-09!53;UBERON:0004645!5.50e-07!1;UBERON:0001256!5.50e-07!1;UBERON:0001259!5.50e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.23e-41;9!UBERON:0001557;1.23e-41;9!UBERON:0000065;3.85e-10;44!UBERON:0000072;9.72e-09;37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.08e-41,9;UBERON:0001557,7.43e-20,19;UBERON:0008947,5.87e-10,38;UBERON:0003258,5.87e-10,38;UBERON:0000072,4.77e-08,47;UBERON:0000065,5.34e-07,54 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.731842236777572,0,0,0.414644220061482,16.9054970086671,5.47466038613745,0,0,0,0,0,1.30137480043828,0.337169380156203,0.241011029883482,1.10293972732394,1.52515610864684,1.66089433377768,0.943819157121151,1.37355025587742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,1.19372242368845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261177619741208,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.5930554011069,14.1665619695151,12.8786504789047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,2.79185747097888,3.82215575590973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.437062287854782,0,0.815910637935854,0,0.275684698604535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162806537221949,0,0,0.0898252021065869,0,0,0,0,0,0 | |||
|short_description=p@chr3:162435939..162435944,+ | |||
}} |
Latest revision as of 17:51, 29 July 2015
Short description: | p@chr3:162435939..162435944, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:162435939..162435944, + |
Coexpression cluster: | C130_iPS_HES3GFP_H9_teratocarcinoma_testicular_colon_Alveolar |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 6.20e-24 | 6 |
neuroblast | 6.20e-24 | 6 |
electrically signaling cell | 6.20e-24 | 6 |
neuronal stem cell | 3.94e-18 | 8 |
epithelial cell of uterus | 3.39e-11 | 6 |
stromal cell of endometrium | 3.39e-11 | 6 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.08e-41 | 9 |
upper respiratory tract | 7.43e-20 | 19 |
respiratory primordium | 5.87e-10 | 38 |
endoderm of foregut | 5.87e-10 | 38 |
segment of respiratory tract | 4.77e-08 | 47 |
respiratory tract | 5.34e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
female reproductive endometrioid cancer | 3.39e-11 | 6 |