FFCP PHASE1:Mm9::chr12:113912554..113912578,-: Difference between revisions
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{{FFCP|EntrezGene=11651|HGNC=|MCL_coexpression_id=720|UniProt=P31750,F8WJD0|association_with_transcript=-67bp_to_ENSMUST00000001780,ENSMUST00000109749,NM_001165894,NM_009652,uc007pex.2,uc007pey.2_5end|description=CAGE_peak_2_at_Akt1_5end|id=chr12:113912554..113912578,-|ontology_enrichment_celltype=CL:0000221!3.86e-17!44;CL:0000133!3.86e-17!44;CL:0002319!1.34e-16!43;CL:0000117!2.71e-15!23;CL:0000337!2.71e-15!23;CL:0000055!9.56e-15!50;CL:0000540!1.28e-14!33;CL:0000047!1.28e-14!33;CL:0000031!1.28e-14!33;CL:0000404!1.28e-14!33;CL:0000393!8.57e-13!39;CL:0000211!8.57e-13!39;CL:0002321!3.47e-07!70;CL:0000220!3.47e-07!70|ontology_enrichment_celltype_v019_2=CL:0000221,3.42e-17,44;CL:0000133,3.42e-17,44;CL:0002319,1.20e-16,43;CL:0000117,2.43e-15,23;CL:0000337,2.43e-15,23;CL:0000540,1.16e-14,33;CL:0000047,1.16e-14,33;CL:0000031,1.16e-14,33;CL:0000404,1.16e-14,33;CL:0000393,7.85e-13,39;CL:0000211,7.85e-13,39;CL:0002321,2.59e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.37e-27!73;UBERON:0005743!2.37e-27!73;UBERON:0000073!4.14e-27!75;UBERON:0001016!4.14e-27!75;UBERON:0004121!1.09e-21!102;UBERON:0000924!1.09e-21!102;UBERON:0006601!1.09e-21!102;UBERON:0001049!2.18e-21!52;UBERON:0005068!2.18e-21!52;UBERON:0006241!2.18e-21!52;UBERON:0007135!2.18e-21!52;UBERON:0000955!4.66e-20!50;UBERON:0006238!4.66e-20!50;UBERON:0002346!4.84e-20!71;UBERON:0003075!4.84e-20!71;UBERON:0007284!4.84e-20!71;UBERON:0002616!1.36e-19!49;UBERON:0002020!1.92e-18!34;UBERON:0000033!1.60e-17!63;UBERON:0003080!2.24e-16!40;UBERON:0002780!6.92e-16!39;UBERON:0001890!6.92e-16!39;UBERON:0006240!6.92e-16!39;UBERON:0002791!2.26e-15!29;UBERON:0003528!2.26e-15!29;UBERON:0001893!2.26e-15!29;UBERON:0003056!2.15e-14!49;UBERON:0000956!1.56e-10!21;UBERON:0001869!1.56e-10!21;UBERON:0000203!1.56e-10!21;UBERON:0000025!1.41e-09!114;UBERON:0004111!3.93e-09!122;UBERON:0002619!3.40e-08!17;UBERON:0007811!4.55e-07!86|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.94e-27,73;UBERON:0001016,3.39e-27,75;UBERON:0010314,2.09e-23,92;UBERON:0000073,7.45e-23,54;UBERON:0001049,1.87e-21,52;UBERON:0005068,1.87e-21,52;UBERON:0006241,1.87e-21,52;UBERON:0007135,1.87e-21,52;UBERON:0004121,1.98e-20,95;UBERON:0000924,1.98e-20,95;UBERON:0006601,1.98e-20,95;UBERON:0002346,2.30e-19,64;UBERON:0003075,2.30e-19,64;UBERON:0007284,2.30e-19,64;UBERON:0002020,1.68e-18,34;UBERON:0000955,2.66e-18,47;UBERON:0006238,2.66e-18,47;UBERON:0002616,7.60e-18,46;UBERON:0010371,1.96e-16,73;UBERON:0003080,2.00e-16,40;UBERON:0002780,6.19e-16,39;UBERON:0001890,6.19e-16,39;UBERON:0006240,6.19e-16,39;UBERON:0003528,2.03e-15,29;UBERON:0002791,2.03e-15,29;UBERON:0001893,2.03e-15,29;UBERON:0003056,1.95e-14,49;UBERON:0000956,1.46e-10,21;UBERON:0001869,1.46e-10,21;UBERON:0000203,1.46e-10,21;UBERON:0000025,2.39e-09,114;UBERON:0004111,6.49e-09,122;UBERON:0002619,3.22e-08,17|phase1_expression=5.76535849577258,0.348975407639361,1.81999695755814,0.30246421130683,0.500895729946347,2.85394762250213,1.86890112476421,0,0.140788722151667,0,1.02730780935303,1.19658238493005,0.171200729931206,0,2.33176833270964,1.01237633694913,2.09868563438444,0.788655413395594,0.822686601634433,0.84877930359606,3.57181818634493,1.98581902401771,0.783599367416806,0.639969691173627,1.37645568640302,1.14846392823004,0.86152399231815,1.29282739611533,0.570070258369122,0,2.21730510655305,0,1.23012957516914,0,2.02196133825892,2.1610503896604,1.22501613757421,1.67412652294763,1.5626706890476,1.57057123192139,1.17646297606203,2.04913645487534,1.45653105909346,2.7697299954627,2.43304634926835,2.75320128242522,11.7358701652206,10.6832326626419,8.78744730937887,4.86074747685709,5.17949760013841,8.62515386189829,0.167782606057736,0,0,4.11615097657515,4.29800159908135,5.15672092277442,16.9945827122062,9.52183762689659,24.0855933332348,10.5041804941431,6.22506357277798,8.09909745553259,8.89979726310277,4.9733608046227,5.69240209984969,6.53171119046643,13.6870288247191,15.255671031481,15.5640471400023,13.4255962669788,11.7060326704355,11.7591167246356,12.6516021744072,23.8996884518605,13.2139057199266,10.7257363991558,10.9060638611933,14.3756053625911,13.7231465403614,12.5019208933622,13.6799669510677,11.8180148106653,9.47349136216223,10.9012576625257,10.6778760599327,16.5895506784518,5.6794644999888,3.09843396437821,3.47837386442013,3.44169550792555,1.3599426674155,0.539703191637817,0.649776417447669,0,2.94933282276679,11.0779709675738,6.75443611967459,9.54016851177919,10.563256483251,1.28326477414318,7.64415719119937,14.2213340630666,2.59789249213457,1.01343946190039,3.0331466700887,1.59857431606684,0.258937883647172,5.19547486726887,5.89850111004862,4.56698217468212,7.37969591219387,3.46662073271032,5.64425794251383,5.02666365318702,0.988779870937496,1.15679485535929,3.5384422077995,7.117741397686,2.87093973998512,3.39412677194655,1.86391761218122,3.51336956413857,3.14170060220183,1.53274233125155,1.55759661857696,1.19980546198682,1.14363204365758,9.28701964309901,12.3525162761029,13.0680526197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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=11651 | |||
|HGNC= | |||
|MCL_coexpression_id=720 | |||
|TSSclassifier=NA | |||
|UniProt=P31750,F8WJD0 | |||
|association_with_transcript=-67bp_to_ENSMUST00000001780,ENSMUST00000109749,NM_001165894,NM_009652,uc007pex.2,uc007pey.2_5end | |||
|cluster_id=chr12:113912554..113912578,- | |||
|description=CAGE_peak_2_at_Akt1_5end | |||
|id=chr12:113912554..113912578,- | |||
|ontology_enrichment_celltype=CL:0000221!3.86e-17!44;CL:0000133!3.86e-17!44;CL:0002319!1.34e-16!43;CL:0000117!2.71e-15!23;CL:0000337!2.71e-15!23;CL:0000055!9.56e-15!50;CL:0000540!1.28e-14!33;CL:0000047!1.28e-14!33;CL:0000031!1.28e-14!33;CL:0000404!1.28e-14!33;CL:0000393!8.57e-13!39;CL:0000211!8.57e-13!39;CL:0002321!3.47e-07!70;CL:0000220!3.47e-07!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,3.42e-17,44;CL:0000133,3.42e-17,44;CL:0002319,1.20e-16,43;CL:0000117,2.43e-15,23;CL:0000337,2.43e-15,23;CL:0000540,1.16e-14,33;CL:0000047,1.16e-14,33;CL:0000031,1.16e-14,33;CL:0000404,1.16e-14,33;CL:0000393,7.85e-13,39;CL:0000211,7.85e-13,39;CL:0002321,2.59e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.37e-27!73;UBERON:0005743!2.37e-27!73;UBERON:0000073!4.14e-27!75;UBERON:0001016!4.14e-27!75;UBERON:0004121!1.09e-21!102;UBERON:0000924!1.09e-21!102;UBERON:0006601!1.09e-21!102;UBERON:0001049!2.18e-21!52;UBERON:0005068!2.18e-21!52;UBERON:0006241!2.18e-21!52;UBERON:0007135!2.18e-21!52;UBERON:0000955!4.66e-20!50;UBERON:0006238!4.66e-20!50;UBERON:0002346!4.84e-20!71;UBERON:0003075!4.84e-20!71;UBERON:0007284!4.84e-20!71;UBERON:0002616!1.36e-19!49;UBERON:0002020!1.92e-18!34;UBERON:0000033!1.60e-17!63;UBERON:0003080!2.24e-16!40;UBERON:0002780!6.92e-16!39;UBERON:0001890!6.92e-16!39;UBERON:0006240!6.92e-16!39;UBERON:0002791!2.26e-15!29;UBERON:0003528!2.26e-15!29;UBERON:0001893!2.26e-15!29;UBERON:0003056!2.15e-14!49;UBERON:0000956!1.56e-10!21;UBERON:0001869!1.56e-10!21;UBERON:0000203!1.56e-10!21;UBERON:0000025!1.41e-09!114;UBERON:0004111!3.93e-09!122;UBERON:0002619!3.40e-08!17;UBERON:0007811!4.55e-07!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.94e-27,73;UBERON:0001016,3.39e-27,75;UBERON:0010314,2.09e-23,92;UBERON:0000073,7.45e-23,54;UBERON:0001049,1.87e-21,52;UBERON:0005068,1.87e-21,52;UBERON:0006241,1.87e-21,52;UBERON:0007135,1.87e-21,52;UBERON:0004121,1.98e-20,95;UBERON:0000924,1.98e-20,95;UBERON:0006601,1.98e-20,95;UBERON:0002346,2.30e-19,64;UBERON:0003075,2.30e-19,64;UBERON:0007284,2.30e-19,64;UBERON:0002020,1.68e-18,34;UBERON:0000955,2.66e-18,47;UBERON:0006238,2.66e-18,47;UBERON:0002616,7.60e-18,46;UBERON:0010371,1.96e-16,73;UBERON:0003080,2.00e-16,40;UBERON:0002780,6.19e-16,39;UBERON:0001890,6.19e-16,39;UBERON:0006240,6.19e-16,39;UBERON:0003528,2.03e-15,29;UBERON:0002791,2.03e-15,29;UBERON:0001893,2.03e-15,29;UBERON:0003056,1.95e-14,49;UBERON:0000956,1.46e-10,21;UBERON:0001869,1.46e-10,21;UBERON:0000203,1.46e-10,21;UBERON:0000025,2.39e-09,114;UBERON:0004111,6.49e-09,122;UBERON:0002619,3.22e-08,17 | |||
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| |||
|short_description=p2@Akt1 | |||
}} |
Latest revision as of 09:12, 26 September 2015
Short description: | p2@Akt1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Akt1_5end |
Coexpression cluster: | MCL_coexpression_mm9:720 |
Association with transcript: | -67bp_to_ENSMUST00000001780, ENSMUST00000109749, NM_001165894, NM_009652, uc007pex.2, uc007pey.2_5end |
EntrezGene: | Akt1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 3.42e-17 | 44 |
neurectodermal cell | 3.42e-17 | 44 |
neural cell | 1.20e-16 | 43 |
CNS neuron (sensu Vertebrata) | 2.43e-15 | 23 |
neuroblast (sensu Vertebrata) | 2.43e-15 | 23 |
neuron | 1.16e-14 | 33 |
neuronal stem cell | 1.16e-14 | 33 |
neuroblast | 1.16e-14 | 33 |
electrically signaling cell | 1.16e-14 | 33 |
electrically responsive cell | 7.85e-13 | 39 |
electrically active cell | 7.85e-13 | 39 |
embryonic cell | 2.59e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.94e-27 | 73 |
nervous system | 3.39e-27 | 75 |
structure with developmental contribution from neural crest | 2.09e-23 | 92 |
regional part of nervous system | 7.45e-23 | 54 |
neural tube | 1.87e-21 | 52 |
neural rod | 1.87e-21 | 52 |
future spinal cord | 1.87e-21 | 52 |
neural keel | 1.87e-21 | 52 |
ectoderm-derived structure | 1.98e-20 | 95 |
ectoderm | 1.98e-20 | 95 |
presumptive ectoderm | 1.98e-20 | 95 |
neurectoderm | 2.30e-19 | 64 |
neural plate | 2.30e-19 | 64 |
presumptive neural plate | 2.30e-19 | 64 |
gray matter | 1.68e-18 | 34 |
brain | 2.66e-18 | 47 |
future brain | 2.66e-18 | 47 |
regional part of brain | 7.60e-18 | 46 |
ecto-epithelium | 1.96e-16 | 73 |
anterior neural tube | 2.00e-16 | 40 |
regional part of forebrain | 6.19e-16 | 39 |
forebrain | 6.19e-16 | 39 |
future forebrain | 6.19e-16 | 39 |
brain grey matter | 2.03e-15 | 29 |
regional part of telencephalon | 2.03e-15 | 29 |
telencephalon | 2.03e-15 | 29 |
pre-chordal neural plate | 1.95e-14 | 49 |
cerebral cortex | 1.46e-10 | 21 |
cerebral hemisphere | 1.46e-10 | 21 |
pallium | 1.46e-10 | 21 |
tube | 2.39e-09 | 114 |
anatomical conduit | 6.49e-09 | 122 |
regional part of cerebral cortex | 3.22e-08 | 17 |