FFCP PHASE1:Mm9::chr12:110846983..110847003,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=719|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:110846983..110847003,+|id=chr12:110846983..110847003,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002021!3.90e-08!10;UBERON:0000411!3.90e-08!10;UBERON:0001950!3.90e-08!10;UBERON:0000955!5.54e-07!50;UBERON:0006238!5.54e-07!50;UBERON:0002346!6.68e-07!71;UBERON:0003075!6.68e-07!71;UBERON:0007284!6.68e-07!71;UBERON:0000468!9.49e-07!333;UBERON:0002616!9.53e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.11e-14,10;UBERON:0000411,1.11e-14,10;UBERON:0001950,1.11e-14,10;UBERON:0002619,1.43e-07,17;UBERON:0002616,1.93e-07,46;UBERON:0003080,2.05e-07,40;UBERON:0000955,3.55e-07,47;UBERON:0006238,3.55e-07,47;UBERON:0000073,4.38e-07,54;UBERON:0003528,8.21e-07,29;UBERON:0002791,8.21e-07,29;UBERON:0001893,8.21e-07,29;UBERON:0001049,8.26e-07,52;UBERON:0005068,8.26e-07,52;UBERON:0006241,8.26e-07,52;UBERON:0007135,8.26e-07,52|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0,0,0,0.633831403506179,0,0,0,0,0,0,0,0,0,0,0.571301968807607,0,0,0.0958454710182364,0,1.10115880999389,0.893811366596314,0.921639199537461,0.131886287730194,0.0914876436024097,0,0,1.12552522006336,1.06958773443767,0.883885756421003,1.56608848879013,0.186399445825301,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0.29688427812965,0.867426633830679,1.21786191324856,0.691846491768175,1.05505848386836,0.940709657085638,0.125666591329675,0.494389935468748,0,0,2.75003644910596,0.220841518460394,0,0,1.46390398505774,0.628340120440365,0,0,0,0,2.09706895166752,2.74500361691176,0.251308704225729,1.04294592115366,1.53429274398198,0.20778804455956,0.811206315338788,0.509196819251581,0.248813941220186,0,0,0.260240885925407,0,0.360124259610698,0.60281927134286,0.544291993210623,0.2562274405697,0.468508622798644,0,0,1.13463648100692,0.703804496655795,0.219195732427575,2.50242524303038,0.348252166522167,1.64625709126355,0.59710280045548,0,0,0,0,0.234526059981096,0.36012412292203,0,0.590292695242212,0.308534225774757,0.930135779001631,0,0.116765342367169,0.329119699826961,0.164167464079095,0,0,0.219550115291051,0,0.841159794256509,0.411618449517138,0,0,0.426576501070468,0.696710015581316,0.257734922644187,0.605050573870028,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0.228497025219458,0,0.407302655690628,0.581857461502877,0,0,0,0,0,0,0.166845105716094,0.393117990226406,0.449724224769707,0.608580364165509,0.241177159752417,0.25462585178142,0.287696137450811,0.162135226775035,0.274561413188081,2.87536413054709,0.372140947668503,0.624075346229121,0.252578877947112,0,0,0,0,0.488894929326078,0.339490171550376,0.469380496577004,0.335012514883631,0.476087281772027,0.975668239288994,0,0.221464689648775,0,0.327726629431476,0.172684981865896,0,0,0,0,0,0.963303539926752,1.05490517932983,0,0,0,0,0,0,0,0,0,0,0,0.642642632843614,0.141940085208269,0.178065603667255,0.325773918707152,0,0,1.94224508923985,0.302323556964751,0.377210159511796,0.885905678642318,0.614870295887855,0,0,1.42598951353889,0,0,0,3.74483566329167,0.720244376125241,0.129358683782755,0.643011105094777,0,1.42695054081656,1.48094118541909,0,0,0.42366414172764,0,0.16488625294148,0.968786560175433,0.180938774784468,0,0.656563598980245,0,0.741701208042039,0,0,0.185194527369712,0,0,0,0,0,0,0,0.316335993581135,0.203319467126849,0.86404272657441,0.418176592028937,1.31017538247707,0.269728692769641,0.0826534557253359,0,0,0,0,0.149516546043979,0.330916980914195,0.388902376688095,0.129159823477731,1.35164900392623,0.704143431874524,1.0416350787516,0.104859344425711,0,0,0,0.405450430580328,0.308132871494482,0.25984164595559,0.179026695667481,0,0.120195449519969,0,0,0,0,0,0,0,0,0.443971906748129,0,0,0.19318959403219,0,0,0,0,3.95326289831947,1.84130094602871,6.30185064783336,4.1244763762485,2.05524755931193,3.7769694869485,4.72515750162264,4.95353323546643,1.81256963593682,2.07104124700728,0.31136204275253,0.798049746802062,0.341467211508268,1.45864030240976,0,0.183843508450014,3.11145418922261,2.67845574410562,4.49286893428541,0.505394423527595,3.04175159868288,2.07488975524684,2.80924522409647,1.98477972455095,1.55075766180156,0.952587382566147,1.39061191133827,2.12200142510076,1.23625770240992,2.79677948255355,4.80016953339582,5.14679837862079,2.38436189947321,2.76158191601424,2.54095327121393,3.13074049199203,4.20734337607377,7.10288220882176,4.07412341537585,4.48913817326191,3.2031454893527,2.46261205938909,3.6830793885272,1.54936841185966,2.3148793317737,0.749431733813838,1.40358965067245,0.429742108096597,1.53030665655075,0.661774257358546,1.15933917810211|short_description=p@chr12:110846983..110847003,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=719 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:110846983..110847003,+ | |||
|description=CAGE_peak_at_chr12:110846983..110847003,+ | |||
|id=chr12:110846983..110847003,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002021!3.90e-08!10;UBERON:0000411!3.90e-08!10;UBERON:0001950!3.90e-08!10;UBERON:0000955!5.54e-07!50;UBERON:0006238!5.54e-07!50;UBERON:0002346!6.68e-07!71;UBERON:0003075!6.68e-07!71;UBERON:0007284!6.68e-07!71;UBERON:0000468!9.49e-07!333;UBERON:0002616!9.53e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.11e-14,10;UBERON:0000411,1.11e-14,10;UBERON:0001950,1.11e-14,10;UBERON:0002619,1.43e-07,17;UBERON:0002616,1.93e-07,46;UBERON:0003080,2.05e-07,40;UBERON:0000955,3.55e-07,47;UBERON:0006238,3.55e-07,47;UBERON:0000073,4.38e-07,54;UBERON:0003528,8.21e-07,29;UBERON:0002791,8.21e-07,29;UBERON:0001893,8.21e-07,29;UBERON:0001049,8.26e-07,52;UBERON:0005068,8.26e-07,52;UBERON:0006241,8.26e-07,52;UBERON:0007135,8.26e-07,52 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0,0,0,0.633831403506179,0,0,0,0,0,0,0,0,0,0,0.571301968807607,0,0,0.0958454710182364,0,1.10115880999389,0.893811366596314,0.921639199537461,0.131886287730194,0.0914876436024097,0,0,1.12552522006336,1.06958773443767,0.883885756421003,1.56608848879013,0.186399445825301,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0.29688427812965,0.867426633830679,1.21786191324856,0.691846491768175,1.05505848386836,0.940709657085638,0.125666591329675,0.494389935468748,0,0,2.75003644910596,0.220841518460394,0,0,1.46390398505774,0.628340120440365,0,0,0,0,2.09706895166752,2.74500361691176,0.251308704225729,1.04294592115366,1.53429274398198,0.20778804455956,0.811206315338788,0.509196819251581,0.248813941220186,0,0,0.260240885925407,0,0.360124259610698,0.60281927134286,0.544291993210623,0.2562274405697,0.468508622798644,0,0,1.13463648100692,0.703804496655795,0.219195732427575,2.50242524303038,0.348252166522167,1.64625709126355,0.59710280045548,0,0,0,0,0.234526059981096,0.36012412292203,0,0.590292695242212,0.308534225774757,0.930135779001631,0,0.116765342367169,0.329119699826961,0.164167464079095,0,0,0.219550115291051,0,0.841159794256509,0.411618449517138,0,0,0.426576501070468,0.696710015581316,0.257734922644187,0.605050573870028,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0.228497025219458,0,0.407302655690628,0.581857461502877,0,0,0,0,0,0,0.166845105716094,0.393117990226406,0.449724224769707,0.608580364165509,0.241177159752417,0.25462585178142,0.287696137450811,0.162135226775035,0.274561413188081,2.87536413054709,0.372140947668503,0.624075346229121,0.252578877947112,0,0,0,0,0.488894929326078,0.339490171550376,0.469380496577004,0.335012514883631,0.476087281772027,0.975668239288994,0,0.221464689648775,0,0.327726629431476,0.172684981865896,0,0,0,0,0,0.963303539926752,1.05490517932983,0,0,0,0,0,0,0,0,0,0,0,0.642642632843614,0.141940085208269,0.178065603667255,0.325773918707152,0,0,1.94224508923985,0.302323556964751,0.377210159511796,0.885905678642318,0.614870295887855,0,0,1.42598951353889,0,0,0,3.74483566329167,0.720244376125241,0.129358683782755,0.643011105094777,0,1.42695054081656,1.48094118541909,0,0,0.42366414172764,0,0.16488625294148,0.968786560175433,0.180938774784468,0,0.656563598980245,0,0.741701208042039,0,0,0.185194527369712,0,0,0,0,0,0,0,0.316335993581135,0.203319467126849,0.86404272657441,0.418176592028937,1.31017538247707,0.269728692769641,0.0826534557253359,0,0,0,0,0.149516546043979,0.330916980914195,0.388902376688095,0.129159823477731,1.35164900392623,0.704143431874524,1.0416350787516,0.104859344425711,0,0,0,0.405450430580328,0.308132871494482,0.25984164595559,0.179026695667481,0,0.120195449519969,0,0,0,0,0,0,0,0,0.443971906748129,0,0,0.19318959403219,0,0,0,0,3.95326289831947,1.84130094602871,6.30185064783336,4.1244763762485,2.05524755931193,3.7769694869485,4.72515750162264,4.95353323546643,1.81256963593682,2.07104124700728,0.31136204275253,0.798049746802062,0.341467211508268,1.45864030240976,0,0.183843508450014,3.11145418922261,2.67845574410562,4.49286893428541,0.505394423527595,3.04175159868288,2.07488975524684,2.80924522409647,1.98477972455095,1.55075766180156,0.952587382566147,1.39061191133827,2.12200142510076,1.23625770240992,2.79677948255355,4.80016953339582,5.14679837862079,2.38436189947321,2.76158191601424,2.54095327121393,3.13074049199203,4.20734337607377,7.10288220882176,4.07412341537585,4.48913817326191,3.2031454893527,2.46261205938909,3.6830793885272,1.54936841185966,2.3148793317737,0.749431733813838,1.40358965067245,0.429742108096597,1.53030665655075,0.661774257358546,1.15933917810211 | |||
|short_description=p@chr12:110846983..110847003,+ | |||
}} |
Latest revision as of 17:24, 4 August 2015
Short description: | p@chr12:110846983..110847003, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:110846983..110847003, + |
Coexpression cluster: | MCL_coexpression_mm9:719 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 1.11e-14 | 10 |
visual cortex | 1.11e-14 | 10 |
neocortex | 1.11e-14 | 10 |
regional part of cerebral cortex | 1.43e-07 | 17 |
regional part of brain | 1.93e-07 | 46 |
anterior neural tube | 2.05e-07 | 40 |
brain | 3.55e-07 | 47 |
future brain | 3.55e-07 | 47 |
regional part of nervous system | 4.38e-07 | 54 |
brain grey matter | 8.21e-07 | 29 |
regional part of telencephalon | 8.21e-07 | 29 |
telencephalon | 8.21e-07 | 29 |
neural tube | 8.26e-07 | 52 |
neural rod | 8.26e-07 | 52 |
future spinal cord | 8.26e-07 | 52 |
neural keel | 8.26e-07 | 52 |