FFCP PHASE1:Mm9::chr12:110031156..110031198,+: Difference between revisions
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{{FFCP|EntrezGene=22632|HGNC=|MCL_coexpression_id=894|UniProt=Q00899|association_with_transcript=0bp_to_ENSMUST00000021692_5end|description=CAGE_peak_2_at_Yy1_5end|id=chr12:110031156..110031198,+|ontology_enrichment_celltype=CL:0000791!3.42e-07!9;CL:0000789!3.42e-07!9;CL:0002420!3.42e-07!9;CL:0002419!3.42e-07!9;CL:0000790!3.42e-07!9|ontology_enrichment_celltype_v019_2=CL:0000791,3.42e-07,9;CL:0000789,3.42e-07,9;CL:0002420,3.42e-07,9;CL:0002419,3.42e-07,9;CL:0000790,3.42e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005911!1.23e-10!69;UBERON:0004177!7.85e-10!29;UBERON:0003929!9.00e-10!55;UBERON:0001007!7.05e-09!128;UBERON:0001555!7.05e-09!128;UBERON:0007026!7.05e-09!128;UBERON:0004119!7.17e-09!130;UBERON:0000925!7.17e-09!130;UBERON:0006595!7.17e-09!130;UBERON:0002390!7.33e-09!45;UBERON:0003061!7.33e-09!45;UBERON:0005057!8.63e-09!51;UBERON:0002405!1.64e-08!70;UBERON:0004921!1.67e-08!126;UBERON:0004185!1.67e-08!126;UBERON:0002193!2.00e-08!48;UBERON:0002370!6.89e-08!23;UBERON:0000974!6.89e-08!23;UBERON:0004807!6.89e-08!23;UBERON:0005058!6.89e-08!23;UBERON:0003351!6.89e-08!23;UBERON:0009113!6.89e-08!23;UBERON:0003295!6.89e-08!23;UBERON:0009722!6.89e-08!23;UBERON:0005562!6.89e-08!23;UBERON:0007690!6.89e-08!23;UBERON:0000490!2.52e-07!66;UBERON:0006562!3.39e-07!24;UBERON:0001557!3.39e-07!24;UBERON:0001042!3.39e-07!24;UBERON:0008814!3.39e-07!24;UBERON:0009145!3.39e-07!24;UBERON:0003408!4.07e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0005911,1.23e-10,69;UBERON:0004177,7.85e-10,29;UBERON:0005057,7.85e-10,29;UBERON:0003929,9.00e-10,55;UBERON:0002390,7.33e-09,45;UBERON:0003061,7.33e-09,45;UBERON:0002193,2.00e-08,48;UBERON:0002405,2.00e-08,48;UBERON:0001007,3.00e-08,116;UBERON:0001555,3.00e-08,116;UBERON:0007026,3.00e-08,116;UBERON:0004119,3.11e-08,118;UBERON:0000925,3.11e-08,118;UBERON:0006595,3.11e-08,118;UBERON:0004921,6.86e-08,114;UBERON:0002370,6.89e-08,23;UBERON:0000974,6.89e-08,23;UBERON:0004807,6.89e-08,23;UBERON:0005058,6.89e-08,23;UBERON:0003351,6.89e-08,23;UBERON:0009113,6.89e-08,23;UBERON:0003295,6.89e-08,23;UBERON:0009722,6.89e-08,23;UBERON:0005562,6.89e-08,23;UBERON:0007690,6.89e-08,23;UBERON:0000077,8.79e-08,35;UBERON:0000490,2.52e-07,66;UBERON:0006562,3.39e-07,24;UBERON:0001557,3.39e-07,24;UBERON:0001042,3.39e-07,24;UBERON:0008814,3.39e-07,24;UBERON:0009145,3.39e-07,24;UBERON:0003408,4.07e-07,24|phase1_expression=14.0930985452219,29.3139342417063,27.7549536027617,25.1045295384669,23.041203577532,27.0285627778143,18.6890112476421,30.7313509790952,72.3654031859567,63.1974221069382,28.7646186618848,30.3931925772232,26.5361131393369,27.7122675668222,16.9885978525988,20.2475267389826,21.6864182219725,26.498821890092,24.2692547482158,25.8877687596798,16.1582251287033,10.0283860712894,11.7539905112521,14.7193028969934,14.6821939882989,18.3754228516806,21.9688618041128,26.5029616203644,9.69119439227507,8.56902441183765,13.9690221712842,10.1604907753541,10.4561013889377,0,15.3091358468176,14.6286487915473,15.1085323634153,35.1566569819002,22.6587249911902,31.4114246384279,40.58797267414,35.5183652178392,48.0655249500842,4.53228544712078,3.24406179902447,4.9557623083654,5.47673941043627,5.23260375313072,7.46933021297204,5.8328969722285,9.65906309215001,7.18762821824858,46.1402166658775,47.1485392307374,31.5928171193916,5.91696702882678,7.16333599846892,8.25075347643908,11.1274053472779,6.87688273053643,8.23980824558033,4.74382344896785,4.4464739805557,14.3983954765024,10.8775299882367,12.7886420690298,10.7856039786626,8.06858441175265,14.9313041724208,14.0406175864958,12.8298226424343,5.42736870367227,6.84692476950002,12.3715707207104,15.6228117759725,4.5960939330501,6.60695285996332,6.89511625660014,10.4452442614246,10.2871304429551,12.0763689555181,13.022834263919,9.77140496504833,9.56696437053856,8.70950012327818,4.41942878210502,7.97281412474976,10.6247684120421,11.2832028066444,8.23730005163962,10.1452571045587,8.60423876981386,8.15965600449301,14.0322829825832,12.9955283489534,8.51251085484938,10.5333315098814,8.01022516116871,4.41636207824877,6.00677276667578,11.2674735821344,6.41632387071589,12.7402619853323,7.11066703153331,4.11332977921307,4.05375784760158,5.05524445014783,14.8439043634778,2.84831672011889,13.6566767939639,13.8788261412909,6.69824052286711,9.91646638201052,10.399862198131,6.23220147819235,17.3419896034952,12.6069433544531,7.22996784599558,10.6153266233985,12.9413479957927,17.2256384399107,13.091631834651,11.1835056730873,8.49064311333487,13.1951425292477,11.4955674843866,14.8570754387341,14.3976655438418,12.0716715719411,8.23848516726525,8.23501085073528,13.6963243803022,8.51739168942155,11.5071955798649,7.68815764870372,7.94982189032012,11.2023300235348,16.048499208702,6.06534620240819,12.416069497302,14.5734896118228,12.8745178482745,14.0448461248172,14.1662528765572,11.7022778540284,11.6583485459213,11.4316103962869,11.9003550539947,11.2095356325078,13.2374256117473,11.7887253189846,13.8093311429372,11.6779844674751,8.358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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=22632 | |||
|HGNC= | |||
|MCL_coexpression_id=894 | |||
|TSSclassifier=NA | |||
|UniProt=Q00899 | |||
|association_with_transcript=0bp_to_ENSMUST00000021692_5end | |||
|cluster_id=chr12:110031156..110031198,+ | |||
|description=CAGE_peak_2_at_Yy1_5end | |||
|id=chr12:110031156..110031198,+ | |||
|ontology_enrichment_celltype=CL:0000791!3.42e-07!9;CL:0000789!3.42e-07!9;CL:0002420!3.42e-07!9;CL:0002419!3.42e-07!9;CL:0000790!3.42e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,3.42e-07,9;CL:0000789,3.42e-07,9;CL:0002420,3.42e-07,9;CL:0002419,3.42e-07,9;CL:0000790,3.42e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005911!1.23e-10!69;UBERON:0004177!7.85e-10!29;UBERON:0003929!9.00e-10!55;UBERON:0001007!7.05e-09!128;UBERON:0001555!7.05e-09!128;UBERON:0007026!7.05e-09!128;UBERON:0004119!7.17e-09!130;UBERON:0000925!7.17e-09!130;UBERON:0006595!7.17e-09!130;UBERON:0002390!7.33e-09!45;UBERON:0003061!7.33e-09!45;UBERON:0005057!8.63e-09!51;UBERON:0002405!1.64e-08!70;UBERON:0004921!1.67e-08!126;UBERON:0004185!1.67e-08!126;UBERON:0002193!2.00e-08!48;UBERON:0002370!6.89e-08!23;UBERON:0000974!6.89e-08!23;UBERON:0004807!6.89e-08!23;UBERON:0005058!6.89e-08!23;UBERON:0003351!6.89e-08!23;UBERON:0009113!6.89e-08!23;UBERON:0003295!6.89e-08!23;UBERON:0009722!6.89e-08!23;UBERON:0005562!6.89e-08!23;UBERON:0007690!6.89e-08!23;UBERON:0000490!2.52e-07!66;UBERON:0006562!3.39e-07!24;UBERON:0001557!3.39e-07!24;UBERON:0001042!3.39e-07!24;UBERON:0008814!3.39e-07!24;UBERON:0009145!3.39e-07!24;UBERON:0003408!4.07e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005911,1.23e-10,69;UBERON:0004177,7.85e-10,29;UBERON:0005057,7.85e-10,29;UBERON:0003929,9.00e-10,55;UBERON:0002390,7.33e-09,45;UBERON:0003061,7.33e-09,45;UBERON:0002193,2.00e-08,48;UBERON:0002405,2.00e-08,48;UBERON:0001007,3.00e-08,116;UBERON:0001555,3.00e-08,116;UBERON:0007026,3.00e-08,116;UBERON:0004119,3.11e-08,118;UBERON:0000925,3.11e-08,118;UBERON:0006595,3.11e-08,118;UBERON:0004921,6.86e-08,114;UBERON:0002370,6.89e-08,23;UBERON:0000974,6.89e-08,23;UBERON:0004807,6.89e-08,23;UBERON:0005058,6.89e-08,23;UBERON:0003351,6.89e-08,23;UBERON:0009113,6.89e-08,23;UBERON:0003295,6.89e-08,23;UBERON:0009722,6.89e-08,23;UBERON:0005562,6.89e-08,23;UBERON:0007690,6.89e-08,23;UBERON:0000077,8.79e-08,35;UBERON:0000490,2.52e-07,66;UBERON:0006562,3.39e-07,24;UBERON:0001557,3.39e-07,24;UBERON:0001042,3.39e-07,24;UBERON:0008814,3.39e-07,24;UBERON:0009145,3.39e-07,24;UBERON:0003408,4.07e-07,24 | |||
|phase1_expression=14.0930985452219,29.3139342417063,27.7549536027617,25.1045295384669,23.041203577532,27.0285627778143,18.6890112476421,30.7313509790952,72.3654031859567,63.1974221069382,28.7646186618848,30.3931925772232,26.5361131393369,27.7122675668222,16.9885978525988,20.2475267389826,21.6864182219725,26.498821890092,24.2692547482158,25.8877687596798,16.1582251287033,10.0283860712894,11.7539905112521,14.7193028969934,14.6821939882989,18.3754228516806,21.9688618041128,26.5029616203644,9.69119439227507,8.56902441183765,13.9690221712842,10.1604907753541,10.4561013889377,0,15.3091358468176,14.6286487915473,15.1085323634153,35.1566569819002,22.6587249911902,31.4114246384279,40.58797267414,35.5183652178392,48.0655249500842,4.53228544712078,3.24406179902447,4.9557623083654,5.47673941043627,5.23260375313072,7.46933021297204,5.8328969722285,9.65906309215001,7.18762821824858,46.1402166658775,47.1485392307374,31.5928171193916,5.91696702882678,7.16333599846892,8.25075347643908,11.1274053472779,6.87688273053643,8.23980824558033,4.74382344896785,4.4464739805557,14.3983954765024,10.8775299882367,12.7886420690298,10.7856039786626,8.06858441175265,14.9313041724208,14.0406175864958,12.8298226424343,5.42736870367227,6.84692476950002,12.3715707207104,15.6228117759725,4.5960939330501,6.60695285996332,6.89511625660014,10.4452442614246,10.2871304429551,12.0763689555181,13.022834263919,9.77140496504833,9.56696437053856,8.70950012327818,4.41942878210502,7.97281412474976,10.6247684120421,11.2832028066444,8.23730005163962,10.1452571045587,8.60423876981386,8.15965600449301,14.0322829825832,12.9955283489534,8.51251085484938,10.5333315098814,8.01022516116871,4.41636207824877,6.00677276667578,11.2674735821344,6.41632387071589,12.7402619853323,7.11066703153331,4.11332977921307,4.05375784760158,5.05524445014783,14.8439043634778,2.84831672011889,13.6566767939639,13.8788261412909,6.69824052286711,9.91646638201052,10.399862198131,6.23220147819235,17.3419896034952,12.6069433544531,7.22996784599558,10.6153266233985,12.9413479957927,17.2256384399107,13.091631834651,11.1835056730873,8.49064311333487,13.1951425292477,11.4955674843866,14.8570754387341,14.3976655438418,12.0716715719411,8.23848516726525,8.23501085073528,13.6963243803022,8.51739168942155,11.5071955798649,7.68815764870372,7.94982189032012,11.2023300235348,16.048499208702,6.06534620240819,12.416069497302,14.5734896118228,12.8745178482745,14.0448461248172,14.1662528765572,11.7022778540284,11.6583485459213,11.4316103962869,11.9003550539947,11.2095356325078,13.2374256117473,11.7887253189846,13.8093311429372,11.6779844674751,8.358051996532,11.3180175024369,14.3304672109315,14.7464769335779,6.94839349209731,10.5140494776369,8.28503090142008,9.14651633926275,11.884096056427,11.3637473080901,9.83821158737019,13.4212388212019,9.99895962426754,16.0964040839772,12.9609530027558,8.55711219550098,10.5067177010621,14.1059728609789,14.1813987802572,13.6121071480451,11.541752013392,8.83217783969334,9.36431972651488,13.8775888853195,7.93351699990633,17.276348293354,15.7920936865098,13.788818361464,11.0925938542838,10.8965241483986,10.8428606884159,17.0830462156024,10.2113351928887,14.5774421104156,12.9321706826748,15.5971269695296,13.4822911298133,20.1008386383466,12.1476176685164,13.4664209676688,11.8818453114118,13.5249282807697,13.8482902934814,13.3827216145662,10.8009162631091,11.3825766823663,13.8753539100826,12.2459007716272,9.37818445805684,13.3403682189217,16.5176654658933,14.7419246334902,13.9414509678609,18.6631311677423,16.8824011826692,14.5136735515409,13.8094145976389,17.8348749452539,10.4333337011471,43.1304619582064,13.0249331683976,14.0416952901552,15.4073115547738,9.50806291666135,12.5435315554475,13.6717360723287,13.8328730592454,12.711268162478,15.9560380628677,11.9692026627136,12.2279567932526,10.2358765580986,17.1717610114863,12.7684466726015,11.2946991720875,16.5832959403787,14.0922450655535,16.7504432409919,16.0560455025478,12.0633027151418,6.52686820582452,6.88469982226651,13.7968373152366,6.90367536947505,6.91548950893999,8.19674726883377,15.4007265594668,8.20321370482267,8.19921363022941,9.26320610251035,8.60287672629187,10.4715376818725,12.1722908239198,9.71545684019746,11.3979784585412,8.30104333687699,8.67567554338879,14.1940085208269,15.313641915384,9.61033060186099,9.07335676348945,27.8764790513922,13.110154352369,9.67435382287203,13.3909606626688,9.44966057218473,11.0676653259814,11.8877014857382,11.9966130727577,10.6949213515416,19.5942789920206,18.9753495434998,26.8152412445286,10.2131881726136,14.7650097105674,15.5230420539305,12.2172109968008,10.8177542521787,11.5939731441346,13.3284706687718,8.82948352432338,10.560226862867,14.4045808187398,9.2621927183084,9.39851641766436,10.8181165886257,11.6403945111341,12.8922131523387,11.1615811826642,13.9910801582328,8.52956389248344,22.7258271461144,15.0662413613152,15.3711457716861,14.1276342753518,20.0940514749907,22.8778173206523,18.3576704393364,18.4735917067229,17.9659965945751,6.68269432610579,15.1841276918945,11.79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| |||
|short_description=p2@Yy1 | |||
}} |
Latest revision as of 07:06, 26 September 2015
Short description: | p2@Yy1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Yy1_5end |
Coexpression cluster: | MCL_coexpression_mm9:894 |
Association with transcript: | 0bp_to_ENSMUST00000021692_5end |
EntrezGene: | Yy1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 3.42e-07 | 9 |
alpha-beta T cell | 3.42e-07 | 9 |
immature T cell | 3.42e-07 | 9 |
mature T cell | 3.42e-07 | 9 |
immature alpha-beta T cell | 3.42e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
endo-epithelium | 1.23e-10 | 69 |
hemopoietic organ | 7.85e-10 | 29 |
immune organ | 7.85e-10 | 29 |
gut epithelium | 9.00e-10 | 55 |
hematopoietic system | 7.33e-09 | 45 |
blood island | 7.33e-09 | 45 |
hemolymphoid system | 2.00e-08 | 48 |
immune system | 2.00e-08 | 48 |
digestive system | 3.00e-08 | 116 |
digestive tract | 3.00e-08 | 116 |
primitive gut | 3.00e-08 | 116 |
endoderm-derived structure | 3.11e-08 | 118 |
endoderm | 3.11e-08 | 118 |
presumptive endoderm | 3.11e-08 | 118 |
subdivision of digestive tract | 6.86e-08 | 114 |
thymus | 6.89e-08 | 23 |
neck | 6.89e-08 | 23 |
respiratory system epithelium | 6.89e-08 | 23 |
hemolymphoid system gland | 6.89e-08 | 23 |
pharyngeal epithelium | 6.89e-08 | 23 |
thymic region | 6.89e-08 | 23 |
pharyngeal gland | 6.89e-08 | 23 |
entire pharyngeal arch endoderm | 6.89e-08 | 23 |
thymus primordium | 6.89e-08 | 23 |
early pharyngeal endoderm | 6.89e-08 | 23 |
mixed endoderm/mesoderm-derived structure | 8.79e-08 | 35 |
unilaminar epithelium | 2.52e-07 | 66 |
pharynx | 3.39e-07 | 24 |
upper respiratory tract | 3.39e-07 | 24 |
chordate pharynx | 3.39e-07 | 24 |
pharyngeal arch system | 3.39e-07 | 24 |
pharyngeal region of foregut | 3.39e-07 | 24 |
gland of gut | 4.07e-07 | 24 |