FFCP PHASE1:Mm9::chr12:109572551..109572616,+: Difference between revisions
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{{FFCP|EntrezGene=13116|HGNC=|MCL_coexpression_id=1|UniProt=Q9WVK8,Q3US73|association_with_transcript=0bp_to_ENSMUST00000021684,NM_010010,uc007ozo.1_5end|description=CAGE_peak_1_at_Cyp46a1_5end|id=chr12:109572551..109572616,+|ontology_enrichment_celltype=CL:0002319!1.36e-10!43;CL:0000221!2.07e-10!44;CL:0000133!2.07e-10!44;CL:0000117!2.95e-09!23;CL:0000337!2.95e-09!23;CL:0000055!1.21e-08!50;CL:0000540!2.12e-07!33;CL:0000047!2.12e-07!33;CL:0000031!2.12e-07!33;CL:0000404!2.12e-07!33|ontology_enrichment_celltype_v019_2=CL:0002319,5.07e-11,43;CL:0000221,7.91e-11,44;CL:0000133,7.91e-11,44;CL:0000117,1.06e-09,23;CL:0000337,1.06e-09,23;CL:0000540,1.18e-07,33;CL:0000047,1.18e-07,33;CL:0000031,1.18e-07,33;CL:0000404,1.18e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!9.10e-28!73;UBERON:0005743!9.10e-28!73;UBERON:0000073!1.51e-27!75;UBERON:0001016!1.51e-27!75;UBERON:0004121!6.15e-27!102;UBERON:0000924!6.15e-27!102;UBERON:0006601!6.15e-27!102;UBERON:0000033!2.56e-26!63;UBERON:0002346!1.63e-24!71;UBERON:0003075!1.63e-24!71;UBERON:0007284!1.63e-24!71;UBERON:0001049!1.82e-24!52;UBERON:0005068!1.82e-24!52;UBERON:0006241!1.82e-24!52;UBERON:0007135!1.82e-24!52;UBERON:0000955!9.46e-24!50;UBERON:0006238!9.46e-24!50;UBERON:0002616!4.39e-23!49;UBERON:0003056!3.77e-21!49;UBERON:0003080!7.32e-18!40;UBERON:0002780!2.95e-17!39;UBERON:0001890!2.95e-17!39;UBERON:0006240!2.95e-17!39;UBERON:0002020!5.83e-17!34;UBERON:0002791!2.09e-14!29;UBERON:0003528!2.09e-14!29;UBERON:0001893!2.09e-14!29;UBERON:0007811!4.53e-11!86;UBERON:0000956!5.51e-11!21;UBERON:0001869!5.51e-11!21;UBERON:0000203!5.51e-11!21;UBERON:0000153!1.37e-09!94;UBERON:0002619!1.39e-09!17;UBERON:0004111!5.53e-09!122;UBERON:0000025!5.78e-09!114;UBERON:0002021!4.06e-08!10;UBERON:0000411!4.06e-08!10;UBERON:0001950!4.06e-08!10;UBERON:0003076!3.30e-07!12;UBERON:0003057!3.30e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.70e-29,73;UBERON:0001016,6.30e-29,75;UBERON:0004121,8.11e-29,95;UBERON:0000924,8.11e-29,95;UBERON:0006601,8.11e-29,95;UBERON:0002346,4.85e-28,64;UBERON:0003075,4.85e-28,64;UBERON:0007284,4.85e-28,64;UBERON:0000073,2.62e-27,54;UBERON:0001049,8.60e-26,52;UBERON:0005068,8.60e-26,52;UBERON:0006241,8.60e-26,52;UBERON:0007135,8.60e-26,52;UBERON:0010371,5.72e-25,73;UBERON:0000955,6.38e-23,47;UBERON:0006238,6.38e-23,47;UBERON:0003056,2.77e-22,49;UBERON:0002616,3.13e-22,46;UBERON:0003080,8.37e-19,40;UBERON:0002780,3.65e-18,39;UBERON:0001890,3.65e-18,39;UBERON:0006240,3.65e-18,39;UBERON:0002020,7.52e-18,34;UBERON:0010314,2.58e-17,92;UBERON:0003528,3.80e-15,29;UBERON:0002791,3.80e-15,29;UBERON:0001893,3.80e-15,29;UBERON:0000956,1.58e-11,21;UBERON:0001869,1.58e-11,21;UBERON:0000203,1.58e-11,21;UBERON:0002619,4.77e-10,17;UBERON:0002021,1.69e-08,10;UBERON:0000411,1.69e-08,10;UBERON:0001950,1.69e-08,10;UBERON:0003076,1.55e-07,12;UBERON:0003057,1.55e-07,12;UBERON:0004111,2.26e-07,122;UBERON:0000025,3.08e-07,114|phase1_expression=3.52327463630547,0,0.454999239389536,0,0,0,0,0,0,0.468129052643987,0,0,0,0.0874204024189974,0,0.202475267389826,0,0.157731082679119,0,0.42438965179803,14.2022294552287,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.612508068787107,0,0,0,0.588231488031014,0,0,1.25896817975577,1.72340783073175,0.550640256485045,8.60630478782843,11.9913836009246,14.7189742432096,15.9432517240912,3.07970127575798,12.9377307928474,0,0,0,0.771778308107841,0.286533439938757,2.06268836910977,4.24864567805155,3.1739458756322,5.70448263155561,2.03306719241479,2.66788438833342,0,1.97773272513395,0,15.579205746957,42.264013585371,4.45865332926454,5.13022565660425,2.73422449756797,20.8525218614777,18.1112203580323,2.32732518508413,1.72521847832825,2.75765635983006,66.0695285996332,72.781782708557,55.2983519722477,3.82470234417562,2.92760459527711,3.12548022334056,29.8725808931478,24.7615548413939,41.1027286519619,17.9723437138937,14.0947963991112,7.26957838718672,2.04460721999597,1.66257432234928,1.44932244350839,0.860423876981386,71.3969900393138,54.5100223554195,1.29955283489534,2.68816132258401,1.96622188184453,1.1930122580464,0.779358013808606,1.41335829804136,1.54927761754349,2.56652954828636,5.09610479413291,0,0,0,0,2.2836775943812,0,1.33597925158342,1.56136794089522,1.52232739156071,1.38369298353635,1.3565037649736,2.3517741427141,0.753999547978053,0.741584903203122,0.578397427679647,0,0.808834249737046,0.220841518460394,0.484875253135222,0,12.296793474485,18.6407569063975,0,0,0.599902730993408,0,53.1756769887121,83.7226103158087,8.92145900001337,92.1268897019065,104.076191133445,78.1283047543946,74.6309810111685,2.85150218780886,0.124406970610093,0.505445516867349,1.47309299120532,6.50602214813519,8.73627996847197,8.28285797104606,5.87748789559289,12.5187158438443,7.68682321709099,6.74652416830048,5.17406741478031,0,1.32374256117473,0.703804496655795,2.41115305670332,2.22437799380478,1.39300866608867,1.23469281844766,2.7864797354589,0,0,0,1.86413195281952,0.938104239924385,1.2604344302271,2.840936827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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=13116 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q9WVK8,Q3US73 | |||
|association_with_transcript=0bp_to_ENSMUST00000021684,NM_010010,uc007ozo.1_5end | |||
|cluster_id=chr12:109572551..109572616,+ | |||
|description=CAGE_peak_1_at_Cyp46a1_5end | |||
|id=chr12:109572551..109572616,+ | |||
|ontology_enrichment_celltype=CL:0002319!1.36e-10!43;CL:0000221!2.07e-10!44;CL:0000133!2.07e-10!44;CL:0000117!2.95e-09!23;CL:0000337!2.95e-09!23;CL:0000055!1.21e-08!50;CL:0000540!2.12e-07!33;CL:0000047!2.12e-07!33;CL:0000031!2.12e-07!33;CL:0000404!2.12e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,5.07e-11,43;CL:0000221,7.91e-11,44;CL:0000133,7.91e-11,44;CL:0000117,1.06e-09,23;CL:0000337,1.06e-09,23;CL:0000540,1.18e-07,33;CL:0000047,1.18e-07,33;CL:0000031,1.18e-07,33;CL:0000404,1.18e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!9.10e-28!73;UBERON:0005743!9.10e-28!73;UBERON:0000073!1.51e-27!75;UBERON:0001016!1.51e-27!75;UBERON:0004121!6.15e-27!102;UBERON:0000924!6.15e-27!102;UBERON:0006601!6.15e-27!102;UBERON:0000033!2.56e-26!63;UBERON:0002346!1.63e-24!71;UBERON:0003075!1.63e-24!71;UBERON:0007284!1.63e-24!71;UBERON:0001049!1.82e-24!52;UBERON:0005068!1.82e-24!52;UBERON:0006241!1.82e-24!52;UBERON:0007135!1.82e-24!52;UBERON:0000955!9.46e-24!50;UBERON:0006238!9.46e-24!50;UBERON:0002616!4.39e-23!49;UBERON:0003056!3.77e-21!49;UBERON:0003080!7.32e-18!40;UBERON:0002780!2.95e-17!39;UBERON:0001890!2.95e-17!39;UBERON:0006240!2.95e-17!39;UBERON:0002020!5.83e-17!34;UBERON:0002791!2.09e-14!29;UBERON:0003528!2.09e-14!29;UBERON:0001893!2.09e-14!29;UBERON:0007811!4.53e-11!86;UBERON:0000956!5.51e-11!21;UBERON:0001869!5.51e-11!21;UBERON:0000203!5.51e-11!21;UBERON:0000153!1.37e-09!94;UBERON:0002619!1.39e-09!17;UBERON:0004111!5.53e-09!122;UBERON:0000025!5.78e-09!114;UBERON:0002021!4.06e-08!10;UBERON:0000411!4.06e-08!10;UBERON:0001950!4.06e-08!10;UBERON:0003076!3.30e-07!12;UBERON:0003057!3.30e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.70e-29,73;UBERON:0001016,6.30e-29,75;UBERON:0004121,8.11e-29,95;UBERON:0000924,8.11e-29,95;UBERON:0006601,8.11e-29,95;UBERON:0002346,4.85e-28,64;UBERON:0003075,4.85e-28,64;UBERON:0007284,4.85e-28,64;UBERON:0000073,2.62e-27,54;UBERON:0001049,8.60e-26,52;UBERON:0005068,8.60e-26,52;UBERON:0006241,8.60e-26,52;UBERON:0007135,8.60e-26,52;UBERON:0010371,5.72e-25,73;UBERON:0000955,6.38e-23,47;UBERON:0006238,6.38e-23,47;UBERON:0003056,2.77e-22,49;UBERON:0002616,3.13e-22,46;UBERON:0003080,8.37e-19,40;UBERON:0002780,3.65e-18,39;UBERON:0001890,3.65e-18,39;UBERON:0006240,3.65e-18,39;UBERON:0002020,7.52e-18,34;UBERON:0010314,2.58e-17,92;UBERON:0003528,3.80e-15,29;UBERON:0002791,3.80e-15,29;UBERON:0001893,3.80e-15,29;UBERON:0000956,1.58e-11,21;UBERON:0001869,1.58e-11,21;UBERON:0000203,1.58e-11,21;UBERON:0002619,4.77e-10,17;UBERON:0002021,1.69e-08,10;UBERON:0000411,1.69e-08,10;UBERON:0001950,1.69e-08,10;UBERON:0003076,1.55e-07,12;UBERON:0003057,1.55e-07,12;UBERON:0004111,2.26e-07,122;UBERON:0000025,3.08e-07,114 | |||
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| |||
|short_description=p1@Cyp46a1 | |||
}} |
Latest revision as of 06:52, 26 September 2015
Short description: | p1@Cyp46a1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Cyp46a1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000021684, NM_010010, uc007ozo.1_5end |
EntrezGene: | Cyp46a1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 5.07e-11 | 43 |
ectodermal cell | 7.91e-11 | 44 |
neurectodermal cell | 7.91e-11 | 44 |
CNS neuron (sensu Vertebrata) | 1.06e-09 | 23 |
neuroblast (sensu Vertebrata) | 1.06e-09 | 23 |
neuron | 1.18e-07 | 33 |
neuronal stem cell | 1.18e-07 | 33 |
neuroblast | 1.18e-07 | 33 |
electrically signaling cell | 1.18e-07 | 33 |