FFCP PHASE1:Hg19::chr3:150264153..150264168,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=27230 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10759 | |||
|TSSclassifier=strong | |||
|UniProt=C9JUH5 | |||
|association_with_transcript=117bp_to_ENST00000491660_5end | |||
|cluster_id=chr3:150264153..150264168,- | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_7_at_SERP1_5end | |||
|id=chr3:150264153..150264168,- | |||
|ontology_enrichment_celltype=CL:0000037!2.70e-43!172;CL:0000566!2.70e-43!172;CL:0000763!1.25e-41!112;CL:0000049!1.25e-41!112;CL:0000988!4.32e-41!182;CL:0002032!6.76e-41!165;CL:0000837!6.76e-41!165;CL:0000766!1.51e-40!76;CL:0000738!3.12e-39!140;CL:0000557!7.19e-37!71;CL:0002009!1.11e-34!65;CL:0002194!8.10e-34!63;CL:0000576!8.10e-34!63;CL:0000040!8.10e-34!63;CL:0000559!8.10e-34!63;CL:0000839!9.42e-33!70;CL:0002087!1.13e-31!119;CL:0002031!1.63e-30!124;CL:0002057!7.28e-28!42;CL:0000860!2.08e-27!45;CL:0000115!2.53e-07!35;CL:0000945!5.38e-07!24;CL:0000826!5.38e-07!24;CL:0002139!5.93e-07!24;CL:0002393!9.40e-07!9;CL:0002397!9.40e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.50e-21;33!CL:0002057;1.50e-21;33!CL:0000473;9.22e-21;39!CL:0000234;9.22e-21;39!CL:0000576;2.07e-20;48!CL:0000766;8.17e-18;69!CL:0000763;2.74e-13;100!CL:0000738;4.78e-10;136!CL:0002087;7.10e-10;104!CL:0000988;5.22e-08;177!CL:0000945;2.42e-07;24!CL:0002139;3.97e-07;24!CL:0000236;7.57e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.09e-43,168;CL:0000763,1.89e-42,108;CL:0000049,1.89e-42,108;CL:0000766,1.19e-41,72;CL:0002032,3.74e-41,161;CL:0000837,3.74e-41,161;CL:0000988,5.47e-41,177;CL:0000738,1.52e-39,136;CL:0000557,7.26e-38,67;CL:0002009,1.14e-35,61;CL:0002194,8.53e-35,59;CL:0000576,8.53e-35,59;CL:0000040,8.53e-35,59;CL:0000559,8.53e-35,59;CL:0000839,1.03e-33,66;CL:0002087,9.60e-32,115;CL:0000473,9.86e-32,48;CL:0000234,9.86e-32,48;CL:0002031,1.16e-30,120;CL:0000860,1.50e-28,42;CL:0002057,1.50e-28,42;CL:0000115,8.90e-08,36;CL:0002139,4.29e-07,24;CL:0000945,5.24e-07,24;CL:0000826,5.24e-07,24;CL:0002393,6.88e-07,9;CL:0002397,6.88e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;3.42e-21;42!CL:0000049;3.50e-12;108 | |||
|ontology_enrichment_disease=DOID:2531!6.95e-07!51;DOID:0060083!6.95e-07!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,5.48e-07,51;DOID:0060083,5.48e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0002193!3.14e-37!112;UBERON:0002390!1.87e-36!102;UBERON:0003061!1.87e-36!102;UBERON:0002371!6.56e-30!80;UBERON:0003081!1.81e-26!216;UBERON:0001474!6.29e-26!86;UBERON:0002405!6.90e-24!115;UBERON:0004765!1.70e-18!101;UBERON:0001434!1.70e-18!101;UBERON:0002204!8.81e-09!167;UBERON:0000178!2.33e-07!15;UBERON:0000179!2.33e-07!15;UBERON:0000463!2.33e-07!15;UBERON:0004535!6.02e-07!110;UBERON:0001009!6.46e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.42e-07;15!UBERON:0000179;1.42e-07;15!UBERON:0000463;1.42e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,6.03e-38,108;UBERON:0002390,1.58e-37,98;UBERON:0003061,1.58e-37,98;UBERON:0002405,4.18e-31,93;UBERON:0002371,5.28e-31,76;UBERON:0003081,6.08e-29,203;UBERON:0001474,1.09e-26,82;UBERON:0004765,3.55e-23,90;UBERON:0001434,6.08e-18,100;UBERON:0000926,2.56e-13,315;UBERON:0004120,2.56e-13,315;UBERON:0006603,2.56e-13,315;UBERON:0002204,3.23e-08,167;UBERON:0000178,1.64e-07,15;UBERON:0000179,1.64e-07,15;UBERON:0000463,1.64e-07,15;UBERON:0004535,4.98e-07,109;UBERON:0001009,5.36e-07,112 | |||
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| |||
|short_description=p7@SERP1 | |||
}} |
Latest revision as of 23:47, 15 September 2015
Short description: | p7@SERP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_SERP1_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 117bp_to_ENST00000491660_5end |
EntrezGene: | SERP1 |
HGNC: | 10759 |
UniProt: | C9JUH5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 1.09e-43 | 168 |
myeloid cell | 1.89e-42 | 108 |
common myeloid progenitor | 1.89e-42 | 108 |
myeloid leukocyte | 1.19e-41 | 72 |
hematopoietic oligopotent progenitor cell | 3.74e-41 | 161 |
hematopoietic multipotent progenitor cell | 3.74e-41 | 161 |
hematopoietic cell | 5.47e-41 | 177 |
leukocyte | 1.52e-39 | 136 |
granulocyte monocyte progenitor cell | 7.26e-38 | 67 |
macrophage dendritic cell progenitor | 1.14e-35 | 61 |
monopoietic cell | 8.53e-35 | 59 |
monocyte | 8.53e-35 | 59 |
monoblast | 8.53e-35 | 59 |
promonocyte | 8.53e-35 | 59 |
myeloid lineage restricted progenitor cell | 1.03e-33 | 66 |
nongranular leukocyte | 9.60e-32 | 115 |
defensive cell | 9.86e-32 | 48 |
phagocyte | 9.86e-32 | 48 |
hematopoietic lineage restricted progenitor cell | 1.16e-30 | 120 |
classical monocyte | 1.50e-28 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.50e-28 | 42 |
endothelial cell | 8.90e-08 | 36 |
endothelial cell of vascular tree | 4.29e-07 | 24 |
lymphocyte of B lineage | 5.24e-07 | 24 |
pro-B cell | 5.24e-07 | 24 |
intermediate monocyte | 6.88e-07 | 9 |
CD14-positive, CD16-positive monocyte | 6.88e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 6.03e-38 | 108 |
hematopoietic system | 1.58e-37 | 98 |
blood island | 1.58e-37 | 98 |
immune system | 4.18e-31 | 93 |
bone marrow | 5.28e-31 | 76 |
lateral plate mesoderm | 6.08e-29 | 203 |
bone element | 1.09e-26 | 82 |
skeletal element | 3.55e-23 | 90 |
skeletal system | 6.08e-18 | 100 |
mesoderm | 2.56e-13 | 315 |
mesoderm-derived structure | 2.56e-13 | 315 |
presumptive mesoderm | 2.56e-13 | 315 |
musculoskeletal system | 3.23e-08 | 167 |
blood | 1.64e-07 | 15 |
haemolymphatic fluid | 1.64e-07 | 15 |
organism substance | 1.64e-07 | 15 |
cardiovascular system | 4.98e-07 | 109 |
circulatory system | 5.36e-07 | 112 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 5.48e-07 | 51 |
immune system cancer | 5.48e-07 | 51 |