FFCP PHASE1:Hg19::chr9:6757709..6757725,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr9:6757709..6757725,+
|short_description=p12@KDM4C
|description=CAGE_peak_12_at_KDM4C_5end
|association_with_transcript=53bp_to_ENST00000381306,ENST0000038130...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23081 | |EntrezGene=23081 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17071 | |HGNC=17071 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H3R0 | |UniProt=Q9H3R0 | ||
|association_with_transcript=53bp_to_ENST00000381306,ENST00000381309_5end | |||
|cluster_id=chr9:6757709..6757725,+ | |||
|description=CAGE_peak_12_at_KDM4C_5end | |||
|id=chr9:6757709..6757725,+ | |||
|ontology_enrichment_celltype=CL:0000738!2.67e-23!140;CL:0000037!2.51e-19!172;CL:0000566!2.51e-19!172;CL:0002031!2.88e-19!124;CL:0000988!1.16e-17!182;CL:0002032!5.13e-17!165;CL:0000837!5.13e-17!165;CL:0002087!8.72e-17!119;CL:0000838!2.18e-13!52;CL:0000542!4.04e-13!53;CL:0000051!4.04e-13!53;CL:0000766!2.30e-07!76;CL:0000084!2.81e-07!25;CL:0000827!2.81e-07!25;CL:0000557!2.90e-07!71;CL:0000791!7.02e-07!18;CL:0000789!7.02e-07!18;CL:0002420!7.02e-07!18;CL:0002419!7.02e-07!18;CL:0000790!7.02e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000236;5.95e-13;13!CL:0000542;1.68e-08;53!CL:0000945;3.66e-08;24!CL:0000182;2.77e-07;12!CL:0002087;3.26e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,8.04e-26,136;CL:0000037,4.62e-20,168;CL:0002031,2.94e-19,120;CL:0000988,4.62e-19,177;CL:0002032,3.40e-17,161;CL:0000837,3.40e-17,161;CL:0002087,6.57e-17,115;CL:0000838,3.07e-13,52;CL:0000542,7.59e-13,53;CL:0000051,7.59e-13,53;CL:0000236,7.95e-12,14;CL:0000766,2.01e-08,72;CL:0000945,5.57e-08,24;CL:0000826,5.57e-08,24;CL:0000557,1.18e-07,67;CL:0000182,1.61e-07,12;CL:0000134,8.08e-07,354 | |||
|ontology_enrichment_development_v019=CL:0000051;1.68e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.19e-08!102;UBERON:0003061!1.19e-08!102;UBERON:0007023!1.63e-08!115;UBERON:0002193!3.38e-08!112;UBERON:0002405!8.97e-08!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.51e-09,98;UBERON:0003061,3.51e-09,98;UBERON:0002193,3.32e-08,108 | |||
|phase1_expression=0,0,0.140954404095971,1.0007329835313,0,0,0,0,0,0,0.697801167972428,0,0,0.247532705920093,0,0,0,0,0,0.369363174230364,0,0,0.286235987131057,0,0.125542639594803,1.06978768047132,0.57470412614962,1.18066171970519,0,1.91914699048606,1.08371286321253,0,0.30120591877825,0,0.154934401160603,0.568676929949686,1.17440175733939,1.66198622559563,1.20326668482085,0.434021741431704,1.11957737119962,1.29557466407592,0.77272670290256,0.436194716338694,0,0,0.697287110717054,0,0.309706370895104,1.1507695692886,0.768482119587302,1.6553756092201,0,0.645484683583826,1.35426486594342,0.188242339542605,1.36453075028923,1.34834090667051,0.306083892370903,1.28371610830437,1.91801137739712,0.659702600373432,1.19678194572979,0.426224750532694,0.290209238628584,0.56738522469114,1.24564449799115,0.75374599577023,0,0.217188844705117,0,0.736555271975129,1.58231193720442,0.211255286311942,1.06302149982522,1.04829322754188,1.01095768031846,0.450530678524519,0.48217676009124,1.14005097496499,0.79566670879636,1.0959849225878,0,2.73069305631066,3.55803701545422,3.41384178053206,3.60356388332411,4.02326707968138,2.64417949113945,2.86216126360609,2.27685187643779,4.69789751496751,4.96955196562797,0,2.80254281490768,0.263384084775077,0.393419540227666,1.96505381374582,1.23360899399706,1.33749196312542,3.91106719960308,1.4203434172042,0,0.891283655081389,2.3568472597987,1.32920336750173,1.35401931882508,0.384273959177026,0.390178042679635,1.64437904603676,0.276350017785848,2.89803085735052,1.4828656316206,1.33770414044857,1.04535523804977,1.47302145506836,0.766440987203842,1.71813722741315,0.759059076058509,0.637130828648193,1.30216690771284,0,1.35517607169996,1.4078527226986,2.49861453104692,0.947109008176067,0.821127996921047,2.21767417547206,0.802320587350522,0.868946423296794,0,0,0.383587685530591,0,0.50133791063589,0.144846518960824,0,0.973269740605272,0.378139268656271,0,0.351339142772504,0.785874452986276,0,0,0,0,0.398873881556595,0.953962497221368,1.71598473234038,0.371457501329565,0.198762407366705,0,0,0.56530794192401,0,0,0.208994966536811,0.775250277507987,0.71153252537342,0.66944122552934,0,0,0.24406205754817,1.10298924103761,0,0.17859945656816,0.44905874525234,0.225222960966644,0,0,0,2.63560834872127,3.87780264148325,0,0.496971951695318,0.25326102332916,0.662045904066094,0.573673241497627,0,0,1.06748995729705,0,0,0.134710672069688,0,0.302714855289863,0,0,0,0,0.149448680551801,0,0,0.140450806702248,0,0.122834317311768,0.103325781175765,0,0.247266929278557,0,0,0,0,0.554128230968366,0,0,0,0.340296549480063,1.07633781413317,0.213557388818567,0.211931901159562,0.300091096084402,0.103052529238439,0.515281080091258,0,0.337552664482532,0.194874010322397,0,0.368199594569197,0.161646056818812,0,0.10075209822764,0,0.386521706326594,0.272746120590835,0.286804595389004,0.121973706129595,0,0.232387885739037,0.207322110030741,0.252320850875628,1.45990943630332,0,0,0,0,0.721879481669586,0.118306800039844,0.168584690078102,0,0,0,0,0,0,0,0,0,0.4115740113314,0,2.53510069643662,2.94848165003288,2.36315962672562,0.882926198829301,0.368965315629341,0.514703430895577,0.219500570817251,1.1240175325762,0,0.0925884451585296,0,0,0,0.34779121492523,0,0,0,0.190254152234598,1.58040879591855,0,1.47730203652438,0.234004265139238,0.148631162288728,0,0.335964256397719,0.425325291727159,0,0,0.383382679165211,0.492663237895943,0.792435906119034,4.14656231081544,3.02651902175619,5.17593977048158,0.063497894292169,0,1.17217447210047,0,0,0.901029173531752,0,0.224262168690721,0,0,0.517086863031111,0,0,0,0,0,0,0,0.142977993658148,0.542621605391443,0,0,0.355391948742546,0,0.602878754119172,0,0.299918973546171,0,0.502257091432126,0,0.239624855491583,0,0,0.144781306667579,0.410952645100767,0,0.448340575974109,1.77327684181734,1.2937654491571,2.43851768931522,0,0,0.773288812777695,0.167516265334349,1.27587750330633,2.24702107184155,0,0.414415513436035,0,0,0,0.207970861530807,0.356857977594324,0,0.468565659970853,0.300946099727719,0,0,0.664225598535437,0,0.173767228936166,0,0,1.44737618286021,1.07857100409308,1.38745825144478,0,0,0,0,0.306923946576125,0,0.256278298511402,0,0.160853921143607,0,0,0,0,0,0.116210378459959,0,0.40101294060657,0.0920809889358963,0.114814448164607,0,0,0.451199612907412,0.924184045252977,0,0,0.316654886678627,0,0,0,0,0,0.501689773854853,0,0.831076008928724,0,0.657779629937804,1.3071772551245,0,0,0,0.309123034943167,0,0.330037999682352,0,0,0,0,0,0,0,0,0,0.0852266274161009,0.0890320356467374,0.165284915360978,0.192190067365106,2.16941611240793,0,0,0.31481234683064,0,0,0,0,0,0.286249773483982,0,0.632758849437452,0.190630193923825,0.511795582622668,0.42793898803392,0,1.56989728039846,0,0.274537029736055,0.235624804691373,0.404364963146632,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0.202910376962704,0,0.281695602532241,0.143411352204052,0.0982490410131212,0,0.709522128141196,0,0,0,0,0,1.34060455107157,0,0.659006605437454,0,0,0,0,1.52234282769651,0.764637207142375,0.569647187174163,0.952927101831156,1.23408681925858,0,0,0.79312517629427,0.1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|phase1_expression=0,0,0.140954404095971,1.0007329835313,0,0,0,0,0,0,0.697801167972428,0,0,0.247532705920093,0,0,0,0,0,0.369363174230364,0,0,0.286235987131057,0,0.125542639594803,1.06978768047132,0.57470412614962,1.18066171970519,0,1.91914699048606,1.08371286321253,0,0.30120591877825,0,0.154934401160603,0.568676929949686,1.17440175733939,1.66198622559563,1.20326668482085,0.434021741431704,1.11957737119962,1.29557466407592,0.77272670290256,0.436194716338694,0,0,0.697287110717054,0,0.309706370895104,1.1507695692886,0.768482119587302,1.6553756092201,0,0.645484683583826,1.35426486594342,0.188242339542605,1.36453075028923,1.34834090667051,0.306083892370903,1.28371610830437,1.91801137739712,0.659702600373432,1.19678194572979,0.426224750532694,0.290209238628584,0.56738522469114,1.24564449799115,0.75374599577023,0,0.217188844705117,0,0.736555271975129,1.58231193720442,0.211255286311942,1.06302149982522,1.04829322754188,1.01095768031846,0.450530678524519,0.48217676009124,1.14005097496499,0.79566670879636,1.0959849225878,0,2.73069305631066,3.55803701545422,3.41384178053206,3.60356388332411,4.02326707968138,2.64417949113945,2.86216126360609,2.27685187643779,4.69789751496751,4.96955196562797,0,2.80254281490768,0.263384084775077,0.393419540227666,1.96505381374582,1.23360899399706,1.33749196312542,3.91106719960308,1.4203434172042,0,0.891283655081389,2.3568472597987,1.32920336750173,1.35401931882508,0.384273959177026,0.390178042679635,1.64437904603676,0.276350017785848,2.89803085735052,1.4828656316206,1.33770414044857,1.04535523804977,1.47302145506836,0.766440987203842,1.71813722741315,0.759059076058509,0.637130828648193,1.30216690771284,0,1.35517607169996,1.4078527226986,2.49861453104692,0.947109008176067,0.821127996921047,2.21767417547206,0.802320587350522,0.868946423296794,0,0,0.383587685530591,0,0.50133791063589,0.144846518960824,0,0.973269740605272,0.378139268656271,0,0.351339142772504,0.785874452986276,0,0,0,0,0.398873881556595,0.953962497221368,1.71598473234038,0.371457501329565,0.198762407366705,0,0,0.56530794192401,0,0,0.208994966536811,0.775250277507987,0.71153252537342,0.66944122552934,0,0,0.24406205754817,1.10298924103761,0,0.17859945656816,0.44905874525234,0.225222960966644,0,0,0,2.63560834872127,3.87780264148325,0,0.496971951695318,0.25326102332916,0.662045904066094,0.573673241497627,0,0,1.06748995729705,0,0,0.134710672069688,0,0.302714855289863,0,0,0,0,0.149448680551801,0,0,0.140450806702248,0,0.122834317311768,0.103325781175765,0,0.247266929278557,0,0,0,0,0.554128230968366,0,0,0,0.340296549480063,1.07633781413317,0.213557388818567,0.211931901159562,0.300091096084402,0.103052529238439,0.515281080091258,0,0.337552664482532,0.194874010322397,0,0.368199594569197,0.161646056818812,0,0.10075209822764,0,0.386521706326594,0.272746120590835,0.286804595389004,0.121973706129595,0,0.232387885739037,0.207322110030741,0.252320850875628,1.45990943630332,0,0,0,0,0.721879481669586,0.118306800039844,0.168584690078102,0,0,0,0,0,0,0,0,0,0.4115740113314,0,2.53510069643662,2.94848165003288,2.36315962672562,0.882926198829301,0.368965315629341,0.514703430895577,0.219500570817251,1.1240175325762,0,0.0925884451585296,0,0,0,0.34779121492523,0,0,0,0.190254152234598,1.58040879591855,0,1.47730203652438,0.234004265139238,0.148631162288728,0,0.335964256397719,0.425325291727159,0,0,0.383382679165211,0.492663237895943,0.792435906119034,4.14656231081544,3.02651902175619,5.17593977048158,0.063497894292169,0,1.17217447210047,0,0,0.901029173531752,0,0.224262168690721,0,0,0.517086863031111,0,0,0,0,0,0,0,0.142977993658148,0.542621605391443,0,0,0.355391948742546,0,0.602878754119172,0,0.299918973546171,0,0.502257091432126,0,0.239624855491583,0,0,0.144781306667579,0.410952645100767,0,0.448340575974109,1.77327684181734,1.2937654491571,2.43851768931522,0,0,0.773288812777695,0.167516265334349,1.27587750330633,2.24702107184155,0,0.414415513436035,0,0,0,0.207970861530807,0.356857977594324,0,0.468565659970853,0.300946099727719,0,0,0.664225598535437,0,0.173767228936166,0,0,1.44737618286021,1.07857100409308,1.38745825144478,0,0,0,0,0.306923946576125,0,0.256278298511402,0,0.160853921143607,0,0,0,0,0,0.116210378459959,0,0.40101294060657,0.0920809889358963,0.114814448164607,0,0,0.451199612907412,0.924184045252977,0,0,0.316654886678627,0,0,0,0,0,0.501689773854853,0,0.831076008928724,0,0.657779629937804,1.3071772551245,0,0,0,0.309123034943167,0,0.330037999682352,0,0,0,0,0,0,0,0,0,0.0852266274161009,0.0890320356467374,0.165284915360978,0.192190067365106,2.16941611240793,0,0,0.31481234683064,0,0,0,0,0,0.286249773483982,0,0.632758849437452,0.190630193923825,0.511795582622668,0.42793898803392,0,1.56989728039846,0,0.274537029736055,0.235624804691373,0.404364963146632,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0.202910376962704,0,0.281695602532241,0.143411352204052,0.0982490410131212,0,0.709522128141196,0,0,0,0,0,1.34060455107157,0,0.659006605437454,0,0,0,0,1.52234282769651,0.764637207142375,0.569647187174163,0.952927101831156,1.23408681925858,0,0,0.79312517629427,0.1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| ||
|short_description=p12@KDM4C | |||
}} | }} |
Latest revision as of 15:18, 17 September 2015
Short description: | p12@KDM4C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_KDM4C_5end |
Coexpression cluster: | NA |
Association with transcript: | 53bp_to_ENST00000381306, ENST00000381309_5end |
EntrezGene: | KDM4C |
HGNC: | 17071 |
UniProt: | Q9H3R0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 8.04e-26 | 136 |
hematopoietic stem cell | 4.62e-20 | 168 |
hematopoietic lineage restricted progenitor cell | 2.94e-19 | 120 |
hematopoietic cell | 4.62e-19 | 177 |
hematopoietic oligopotent progenitor cell | 3.40e-17 | 161 |
hematopoietic multipotent progenitor cell | 3.40e-17 | 161 |
nongranular leukocyte | 6.57e-17 | 115 |
lymphoid lineage restricted progenitor cell | 3.07e-13 | 52 |
lymphocyte | 7.59e-13 | 53 |
common lymphoid progenitor | 7.59e-13 | 53 |
B cell | 7.95e-12 | 14 |
myeloid leukocyte | 2.01e-08 | 72 |
lymphocyte of B lineage | 5.57e-08 | 24 |
pro-B cell | 5.57e-08 | 24 |
granulocyte monocyte progenitor cell | 1.18e-07 | 67 |
hepatocyte | 1.61e-07 | 12 |
mesenchymal cell | 8.08e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.51e-09 | 98 |
blood island | 3.51e-09 | 98 |
hemolymphoid system | 3.32e-08 | 108 |