FFCP PHASE1:Hg19::chr3:148925425..148925449,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1356 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2295 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-15bp_to_ENST00000489736_5end | |||
|cluster_id=chr3:148925425..148925449,- | |||
|coexpression_cluster_id=C100 | |||
|description=CAGE_peak_10_at_CP_5end | |||
|id=chr3:148925425..148925449,- | |||
|ontology_enrichment_celltype=CL:0000181!6.81e-27!12;CL:0000417!6.81e-27!12;CL:0000668!6.81e-27!12;CL:0000414!6.81e-27!12;CL:0000412!6.81e-27!12;CL:0000182!6.81e-27!12;CL:0002541!2.79e-13!3 | |||
|ontology_enrichment_celltype_v019=CL:0000047;7.14e-26;2!CL:0000182;1.71e-17;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.71e-17,12;CL:0000047,1.69e-07,8 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001897!4.53e-19!2;UBERON:0002107!7.43e-17!19;UBERON:0006925!7.43e-17!19;UBERON:0008836!7.43e-17!19;UBERON:0008835!1.67e-14!22;UBERON:0003894!1.67e-14!22;UBERON:0009854!7.45e-14!23;UBERON:0000476!2.79e-13!3;UBERON:0000920!2.79e-13!3;UBERON:0006331!8.35e-13!3;UBERON:0007499!1.03e-12!25;UBERON:0009497!1.03e-12!25;UBERON:0000015!1.03e-12!25;UBERON:0002423!1.03e-12!25;UBERON:0006235!1.03e-12!25;UBERON:0004161!1.03e-12!25;UBERON:0003124!1.76e-12!7;UBERON:0005057!3.31e-12!26;UBERON:0009856!3.31e-12!26;UBERON:0002135!1.73e-10!1;UBERON:0002038!2.74e-10!1;UBERON:0009661!2.74e-10!1;UBERON:0002365!3.62e-10!31;UBERON:0002330!3.62e-10!31;UBERON:0002368!5.93e-09!35;UBERON:0000949!7.38e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.81e-11;19!UBERON:0006925;1.81e-11;19!UBERON:0002423;5.71e-09;25!UBERON:0002365;1.21e-07;31!UBERON:0002330;1.21e-07;31!UBERON:0002368;3.69e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.81e-11,19;UBERON:0006925,1.81e-11,19;UBERON:0008836,1.81e-11,19;UBERON:0008835,4.74e-10,22;UBERON:0003894,4.74e-10,22;UBERON:0009854,1.17e-09,23;UBERON:0007499,5.71e-09,25;UBERON:0009497,5.71e-09,25;UBERON:0000015,5.71e-09,25;UBERON:0002423,5.71e-09,25;UBERON:0006235,5.71e-09,25;UBERON:0004161,5.71e-09,25;UBERON:0009856,1.15e-08,26;UBERON:0002365,1.99e-07,31;UBERON:0002330,1.99e-07,31 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0.982827216677626,1.77236972004421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.457987967009312,0.533034776018635,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0.0787831823072236,0.164831716762333,0.13480708770837,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.319267718114302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620916591138472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.30093273862063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p10@CP | |||
}} |
Latest revision as of 21:07, 15 September 2015
Short description: | p10@CP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_CP_5end |
Coexpression cluster: | C100_rhabdomyosarcoma_gastric_pineal_Wilms_cervical_mesodermal_endometrial |
Association with transcript: | -15bp_to_ENST00000489736_5end |
EntrezGene: | CP |
HGNC: | 2295 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.71e-17 | 12 |
neuronal stem cell | 1.69e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
liver | 1.81e-11 | 19 |
digestive gland | 1.81e-11 | 19 |
liver bud | 1.81e-11 | 19 |
hepatic diverticulum | 4.74e-10 | 22 |
liver primordium | 4.74e-10 | 22 |
digestive tract diverticulum | 1.17e-09 | 23 |
epithelial sac | 5.71e-09 | 25 |
epithelium of foregut-midgut junction | 5.71e-09 | 25 |
anatomical boundary | 5.71e-09 | 25 |
hepatobiliary system | 5.71e-09 | 25 |
foregut-midgut junction | 5.71e-09 | 25 |
septum transversum | 5.71e-09 | 25 |
sac | 1.15e-08 | 26 |
exocrine gland | 1.99e-07 | 31 |
exocrine system | 1.99e-07 | 31 |