FFCP PHASE1:Hg19::chr3:145879113..145879126,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5352 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9082 | |||
|TSSclassifier=strong | |||
|UniProt=O00469 | |||
|association_with_transcript=155bp_to_NM_000935,NM_182943,uc003evr.1,uc003evs.1_5end | |||
|cluster_id=chr3:145879113..145879126,- | |||
|coexpression_cluster_id=C1512 | |||
|description=CAGE_peak_2_at_PLOD2_5end | |||
|id=chr3:145879113..145879126,- | |||
|ontology_enrichment_celltype=CL:0000055!3.77e-23!180;CL:0000222!4.33e-19!119;CL:0000220!7.93e-19!246;CL:0002321!2.81e-18!248;CL:0000359!4.70e-17!32;CL:0000680!6.83e-15!57;CL:0000056!6.83e-15!57;CL:0000355!6.83e-15!57;CL:0000187!1.60e-13!54;CL:0000192!2.40e-13!42;CL:0000514!2.40e-13!42;CL:0000393!7.72e-12!60;CL:0000211!7.72e-12!60;CL:0000183!2.14e-11!59;CL:0000057!9.90e-10!75;CL:0000066!2.86e-07!254;CL:0002539!8.74e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.89e-16;32!CL:0000192;7.85e-10;43!CL:0000187;1.76e-07;55!CL:0000134;3.03e-07;55!CL:0002539;6.87e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.68e-18,121;CL:0000359,2.35e-17,32;CL:0002321,1.47e-15,250;CL:0000680,1.43e-14,58;CL:0000056,1.43e-14,58;CL:0000355,1.43e-14,58;CL:0000187,3.39e-13,55;CL:0000192,6.40e-13,43;CL:0000514,6.40e-13,43;CL:0000393,3.25e-11,61;CL:0000211,3.25e-11,61;CL:0000057,3.43e-10,76;CL:0002539,6.91e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000514;7.85e-10;43!CL:0000355;1.39e-07;58 | |||
|ontology_enrichment_disease=DOID:2394!1.02e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;5.96e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,6.11e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0004872!2.26e-22!84;UBERON:0002049!2.45e-21!79;UBERON:0007798!2.45e-21!79;UBERON:0001981!3.65e-21!60;UBERON:0007500!3.65e-21!60;UBERON:0004537!3.65e-21!60;UBERON:0006965!3.65e-21!60;UBERON:0000055!6.40e-21!69;UBERON:0001637!3.70e-20!42;UBERON:0003509!3.70e-20!42;UBERON:0004572!3.70e-20!42;UBERON:0000490!4.06e-19!138;UBERON:0003914!7.01e-18!118;UBERON:0004573!1.01e-16!33;UBERON:0004571!1.01e-16!33;UBERON:0000477!3.27e-15!286;UBERON:0000914!8.94e-15!83;UBERON:0002329!8.94e-15!83;UBERON:0003077!8.94e-15!83;UBERON:0003059!8.94e-15!83;UBERON:0007282!8.94e-15!83;UBERON:0009618!8.94e-15!83;UBERON:0007285!8.94e-15!83;UBERON:0004535!1.73e-14!110;UBERON:0001009!1.95e-14!113;UBERON:0000483!6.06e-14!309;UBERON:0000119!6.48e-14!312;UBERON:0000475!1.19e-13!365;UBERON:0000486!1.21e-13!82;UBERON:0002100!1.55e-13!216;UBERON:0005256!1.98e-13!143;UBERON:0001134!4.20e-13!61;UBERON:0002036!4.20e-13!61;UBERON:0003082!4.20e-13!61;UBERON:0004290!7.49e-13!70;UBERON:0002385!9.55e-13!63;UBERON:0001015!9.55e-13!63;UBERON:0000383!9.55e-13!63;UBERON:0004111!2.65e-12!241;UBERON:0000481!3.63e-12!347;UBERON:0000468!4.20e-12!659;UBERON:0003104!4.66e-11!238;UBERON:0009142!4.66e-11!238;UBERON:0000025!1.09e-10!194;UBERON:0000947!1.15e-09!21;UBERON:0010191!1.15e-09!21;UBERON:0000467!1.20e-09!625;UBERON:0000480!2.13e-09!626;UBERON:0001048!2.40e-07!168;UBERON:0004237!8.74e-07!10;UBERON:0004695!8.74e-07!10;UBERON:0002111!8.74e-07!10;UBERON:0004178!8.74e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.93e-15;33!UBERON:0004571;1.93e-15;33!UBERON:0001637;1.03e-14;42!UBERON:0003509;1.03e-14;42!UBERON:0004572;1.03e-14;42!UBERON:0007500;2.27e-11;56!UBERON:0001981;2.27e-11;56!UBERON:0004537;2.27e-11;56!UBERON:0000947;8.57e-10;21!UBERON:0010191;8.57e-10;21!UBERON:0000055;8.87e-10;65!UBERON:0002049;1.62e-08;75!UBERON:0007798;1.62e-08;75!UBERON:0004237;6.87e-07;10!UBERON:0004695;6.87e-07;10!UBERON:0002111;6.87e-07;10!UBERON:0004178;6.87e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004872,9.57e-22,83;UBERON:0002049,4.33e-21,78;UBERON:0007798,4.33e-21,78;UBERON:0007500,7.05e-21,59;UBERON:0001981,7.05e-21,59;UBERON:0004537,7.05e-21,59;UBERON:0006965,7.05e-21,59;UBERON:0000055,9.83e-21,68;UBERON:0001637,1.61e-20,42;UBERON:0003509,1.61e-20,42;UBERON:0004572,1.61e-20,42;UBERON:0000490,4.10e-19,148;UBERON:0003914,6.75e-18,117;UBERON:0004573,5.11e-17,33;UBERON:0004571,5.11e-17,33;UBERON:0004535,1.60e-14,109;UBERON:0001009,1.80e-14,112;UBERON:0000486,2.34e-13,83;UBERON:0005256,6.71e-13,122;UBERON:0001134,6.84e-13,62;UBERON:0002036,6.84e-13,62;UBERON:0003082,6.84e-13,62;UBERON:0002329,1.11e-12,71;UBERON:0003059,1.11e-12,71;UBERON:0007282,1.11e-12,71;UBERON:0004290,1.11e-12,71;UBERON:0009618,1.11e-12,71;UBERON:0007524,1.37e-12,73;UBERON:0002385,1.51e-12,64;UBERON:0001015,1.51e-12,64;UBERON:0000383,1.51e-12,64;UBERON:0000483,1.73e-12,306;UBERON:0000119,1.83e-12,309;UBERON:0003077,2.38e-12,72;UBERON:0007285,2.38e-12,72;UBERON:0003104,1.02e-11,160;UBERON:0009142,1.02e-11,160;UBERON:0004111,1.80e-11,240;UBERON:0002100,3.34e-11,199;UBERON:0007503,5.62e-11,78;UBERON:0000025,7.85e-10,192;UBERON:0000947,7.99e-10,21;UBERON:0010191,7.99e-10,21;UBERON:0001048,8.02e-08,160;UBERON:0004237,6.91e-07,10;UBERON:0004695,6.91e-07,10;UBERON:0002111,6.91e-07,10;UBERON:0004178,6.91e-07,10;UBERON:0000948,8.92e-07,24;UBERON:0005498,8.92e-07,24;UBERON:0004140,8.92e-07,24;UBERON:0009881,8.92e-07,24;UBERON:0004141,8.92e-07,24;UBERON:0003084,8.92e-07,24;UBERON:0007005,8.92e-07,24;UBERON:0004139,8.92e-07,24;UBERON:0004291,8.92e-07,24 | |||
|phase1_expression=16.7144108928912,38.323993776486,11.9811243481575,15.0109947529696,18.7723659659461,46.2339417773195,22.796989035148,17.6881564559513,1.30592814099919,30.7167420626886,10.4670175195864,3.05817920982241,3.69273769519835,6.93091576576261,14.9128819077562,54.4583368625938,39.7778388495825,51.1217063271161,74.6537182149476,0.492484232307152,3.06001036866379,8.14982275843028,2.57612388417951,1.64249310087461,1.63205431473244,0,0,0,0,0,0.154816123316076,26.6632155098889,50.9038002735243,5.17655614233503,0,0,0,3.87796785972314,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0.426224750532694,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,6.03630773733273,126.328211101408,16.62620100969,29.0775988168816,40.9915648659131,31.0161519349929,226.285214690726,1.22895262313288,3.32594096193846,3.51339142772504,1.57174890597255,0.728590576585084,0.741568885568859,0,0,0.132957960518865,0,0,0,32.3982724007729,12.9035189265919,22.5641326044936,25.4388573865804,13.8434813949269,31.6385748231078,15.0476375906504,15.2465887909904,20.2786769731425,72.6343729699334,5.63961043952806,3.04108842287405,5.6134273236079,16.91250169591,74.5330592051219,11.4303652203622,9.6547630229253,15.2025498652485,15.3316637465883,17.0867818722263,28.5794720531435,0,0,12.6467275121335,113.309604986533,39.8886111743426,116.387669934819,32.1257015238671,10.6400514659507,39.2474320099615,165.460943381043,70.3002512988906,14.626918663789,28.5586624787739,10.4615617992614,10.7463773627901,23.0470369792,0.937285727335186,4.99456122928513,6.27519003698894,2.69007624993242,2.46612447151906,1.29498355494505,2.10676210053373,5.71631679513701,2.08818339430006,6.50952421407322,11.8800285728205,17.8032189080561,3.64064544775211,5.03032699271367,1.0100166837244,2.87772595705518,24.1045780471239,17.1201272143527,16.8568287689461,27.193088662094,52.9728295357298,43.2329022010157,43.1385925413506,46.8369501562632,28.2085630319338,24.1142918417947,24.4758513043348,9.86419338557426,23.2911338492947,31.4721526670672,32.3115231032467,35.2551111800006,2.7479829659198,75.6170432060389,28.5128437984222,22.0428770003634,111.124990568896,309.294100750006,236.326986600539,0.487894824518382,0.662648841607426,12.781333715647,6.73796857599908,6.30802127189071,1.82488679537915,67.2732989018209,48.2430703644664,22.1015874163969,3.71494342425583,0.721879481669586,21.1769172071321,15.3412067971073,21.2089706297464,25.8087896193802,20.4806677446862,21.8288969582209,19.2808770669035,13.5392810936489,15.774633434802,3.69077727312324,19.6338483324824,2.057870056657,2.94017422771084,3.80265104465493,14.7424082501644,5.31710916013264,0,1.47586126251736,49.4115293659754,63.2161643953683,1.1240175325762,2.31216636546751,6.38860271593854,1.62904152655162,3.11980435583874,24.5363281442965,14.1435094069594,39.9189560401794,11.8380487164081,10.1856812766854,19.9766859846328,2.37061319387782,2.57545848628462,0.246217006087397,0,0.594524649154913,141.538089320033,216.864927504728,238.040388269967,6.17953806649653,6.97521452433509,9.20118429996507,0,0,0,0,0,0.63497894292169,0.763976851116555,0,11.9750712215894,8.3290269089692,0.600686115687835,0.285826432630578,1.34557301214433,3.92364061949952,11.0740811589635,30.24958148732,0,7.607724773004,5.31876233169741,8.32059495290929,3.34369586540785,4.25547396069835,3.72991050622539,69.4873049178597,2.71310802695722,6.58592269424615,9.44634934451832,57.928887645035,26.1344118068032,61.192193543096,55.7781413504188,88.5760701873025,0,0,0,20.1284878612929,10.3375742250703,18.5427976552934,109.45466784069,37.8076433492705,104.034419642379,0,0,0,0,4.06551398755941,1.30139853857622,0.773288812777695,1.17261385734044,0.637938751653163,0,0,0,11.5330002215991,3.00102312635806,19.8023467300807,117.295565903375,104.202529457542,26.3363033106671,189.417668043217,33.1040709700491,9.09630016223939,6.2083842775503,50.4811454886932,76.8819432818902,1.91143951829782,1.56640925970192,3.77457766191941,0,0,0,0.909382714338778,8.32177197552485,7.25736703991233,20.8410558567773,27.3162312452751,16.5589455715513,20.8866813286793,15.3512174720011,41.5003116550507,46.0096005979472,22.6688249889904,22.1952156641409,8.1305884453671,18.1739050214267,6.50778119375772,1.32945394550784,247.625490824557,4.78821142466661,8.26664026785169,6.73737321624853,6.16284750309293,1.35359883872224,20.9481716924008,1.56869953835371,0,14.3550215294311,1.13733384070897,3.06168669497728,8.2048048118813,3.08454505380579,0.270946437543853,0,1.01950509218015,0.831076008928724,0.671624264166535,0,0,3.07740150139667,0,4.22991913063594,6.90374778039739,17.1234899210302,12.8714819876117,51.1096328816593,14.3013254128035,228.171180378707,5.7035723792352,8.62672255842009,8.13569476048487,14.8863498283293,3.86712881525785,8.55598494093948,13.9771668962405,10.0606200280813,160.326367900149,169.127259281293,383.220975621236,121.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| |||
|short_description=p2@PLOD2 | |||
}} |
Latest revision as of 06:23, 25 September 2015
Short description: | p2@PLOD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PLOD2_5end |
Coexpression cluster: | C1512_Smooth_hepatic_mesenchymal_Mallassezderived_Small_Gingival_Ewing |
Association with transcript: | 155bp_to_NM_000935, NM_182943, uc003evr.1, uc003evs.1_5end |
EntrezGene: | PLOD2 |
HGNC: | 9082 |
UniProt: | O00469 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.68e-18 | 121 |
vascular associated smooth muscle cell | 2.35e-17 | 32 |
embryonic cell | 1.47e-15 | 250 |
muscle precursor cell | 1.43e-14 | 58 |
myoblast | 1.43e-14 | 58 |
multi-potent skeletal muscle stem cell | 1.43e-14 | 58 |
muscle cell | 3.39e-13 | 55 |
smooth muscle cell | 6.40e-13 | 43 |
smooth muscle myoblast | 6.40e-13 | 43 |
electrically responsive cell | 3.25e-11 | 61 |
electrically active cell | 3.25e-11 | 61 |
fibroblast | 3.43e-10 | 76 |
aortic smooth muscle cell | 6.91e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 6.11e-08 | 14 |