FFCP PHASE1:Hg19::chr3:145824416..145824437,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr3:145824416..145824437,- | |||
|coexpression_cluster_id=C1512 | |||
|description=CAGE_peak_at_chr3:145824416..145824437,- | |||
|id=chr3:145824416..145824437,- | |||
|ontology_enrichment_celltype=CL:0000055!1.38e-19!180;CL:0000222!9.69e-14!119;CL:0000359!2.10e-13!32;CL:0000680!5.18e-13!57;CL:0000056!5.18e-13!57;CL:0000355!5.18e-13!57;CL:0000220!7.40e-12!246;CL:0000187!1.12e-11!54;CL:0002321!1.37e-11!248;CL:0000192!1.91e-11!42;CL:0000514!1.91e-11!42;CL:0000393!1.13e-10!60;CL:0000211!1.13e-10!60;CL:0000183!1.22e-10!59;CL:0000077!1.71e-08!19;CL:0000057!8.03e-08!75 | |||
|ontology_enrichment_celltype_v019=CL:0000359;3.77e-15;32!CL:0000192;2.26e-11;43!CL:0000077;7.12e-10;19!CL:0000134;1.53e-09;55!CL:0000723;3.93e-09;61!CL:0000048;1.31e-08;58!CL:0002539;1.87e-08;10!CL:0000187;1.34e-07;55!CL:0002595;9.63e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,1.69e-15,32;CL:0000680,4.32e-14,58;CL:0000056,4.32e-14,58;CL:0000355,4.32e-14,58;CL:0000192,5.68e-14,43;CL:0000514,5.68e-14,43;CL:0000222,1.31e-13,121;CL:0000187,3.37e-12,55;CL:0000077,2.01e-10,19;CL:0000393,5.15e-10,61;CL:0000211,5.15e-10,61;CL:0002539,2.63e-08,10;CL:0002321,5.70e-08,250;CL:0000048,7.11e-07,427 | |||
|ontology_enrichment_development_v019=CL:0000514;2.26e-11;43!CL:0000355;1.64e-07;58 | |||
|ontology_enrichment_disease=DOID:2394!3.80e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.16e-11;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,8.29e-12,14 | |||
|ontology_enrichment_uberon=UBERON:0001637!7.55e-14!42;UBERON:0003509!7.55e-14!42;UBERON:0004572!7.55e-14!42;UBERON:0000490!7.19e-13!138;UBERON:0002049!4.84e-12!79;UBERON:0007798!4.84e-12!79;UBERON:0001134!1.40e-11!61;UBERON:0002036!1.40e-11!61;UBERON:0003082!1.40e-11!61;UBERON:0004573!1.69e-11!33;UBERON:0004571!1.69e-11!33;UBERON:0002385!2.23e-11!63;UBERON:0001015!2.23e-11!63;UBERON:0000383!2.23e-11!63;UBERON:0000055!2.90e-11!69;UBERON:0001981!2.96e-11!60;UBERON:0007500!2.96e-11!60;UBERON:0004537!2.96e-11!60;UBERON:0006965!2.96e-11!60;UBERON:0005256!3.00e-11!143;UBERON:0000914!4.40e-11!83;UBERON:0002329!4.40e-11!83;UBERON:0003077!4.40e-11!83;UBERON:0003059!4.40e-11!83;UBERON:0007282!4.40e-11!83;UBERON:0009618!4.40e-11!83;UBERON:0007285!4.40e-11!83;UBERON:0003914!2.36e-10!118;UBERON:0004872!1.02e-09!84;UBERON:0004290!1.24e-09!70;UBERON:0000486!5.84e-09!82;UBERON:0002100!1.04e-08!216;UBERON:0004535!1.85e-08!110;UBERON:0001009!7.43e-08!113;UBERON:0003104!3.63e-07!238;UBERON:0009142!3.63e-07!238;UBERON:0000477!3.81e-07!286;UBERON:0000475!5.72e-07!365;UBERON:0000481!8.17e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;2.69e-09;33!UBERON:0004571;2.69e-09;33!UBERON:0001637;5.00e-09;42!UBERON:0003509;5.00e-09;42!UBERON:0004572;5.00e-09;42!UBERON:0004237;1.87e-08;10!UBERON:0004695;1.87e-08;10!UBERON:0002111;1.87e-08;10!UBERON:0004178;1.87e-08;10!UBERON:0001135;3.32e-08;15!UBERON:0002385;5.34e-07;31!UBERON:0001015;5.34e-07;31!UBERON:0000383;5.34e-07;31!UBERON:0003834;9.63e-07;5!UBERON:0001533;9.63e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,3.01e-13,62;UBERON:0002036,3.01e-13,62;UBERON:0003082,3.01e-13,62;UBERON:0002385,1.78e-12,64;UBERON:0001015,1.78e-12,64;UBERON:0000383,1.78e-12,64;UBERON:0007524,4.54e-12,73;UBERON:0002329,4.63e-12,71;UBERON:0003059,4.63e-12,71;UBERON:0007282,4.63e-12,71;UBERON:0004290,4.63e-12,71;UBERON:0009618,4.63e-12,71;UBERON:0001637,5.17e-12,42;UBERON:0003509,5.17e-12,42;UBERON:0004572,5.17e-12,42;UBERON:0003077,9.94e-12,72;UBERON:0007285,9.94e-12,72;UBERON:0000486,1.11e-11,83;UBERON:0007503,1.05e-10,78;UBERON:0004573,1.80e-10,33;UBERON:0004571,1.80e-10,33;UBERON:0005256,3.29e-10,122;UBERON:0003104,9.71e-09,160;UBERON:0009142,9.71e-09,160;UBERON:0000490,2.17e-08,148;UBERON:0004237,2.63e-08,10;UBERON:0004695,2.63e-08,10;UBERON:0002111,2.63e-08,10;UBERON:0004178,2.63e-08,10;UBERON:0001135,6.75e-08,15;UBERON:0007500,1.70e-07,59;UBERON:0001981,1.70e-07,59;UBERON:0004537,1.70e-07,59;UBERON:0006965,1.70e-07,59;UBERON:0002049,1.80e-07,78;UBERON:0007798,1.80e-07,78;UBERON:0004872,3.83e-07,83;UBERON:0000055,5.00e-07,68 | |||
|phase1_expression=0.363356758541113,4.49611100171065,1.40954404095971,1.0007329835313,2.23480547213644,1.74467704820074,2.53299878168311,0.631719873426831,0,0.491467873003018,0,0.218441372130172,0,0.866364470720326,1.32558950291166,4.70627602516243,10.8485015044316,2.19093027116212,4.87932798790507,0.123121058076788,0.204000691244253,0.313454721478088,0,0,0.251085279189606,0,0,0,0,0,0,0,0.6024118375565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,1.79007586580942,1.80719576192283,1.00267582127178,2.89693037921647,0.795285947051099,6.32625331393427,0.378139268656271,0.221729397462564,0.702678285545008,0.0654895377488563,0,0,0,0,0,0,0,0,0.39752481473341,0,0.694281003215189,0.56530794192401,0.838998872419812,2.47606237746061,1.25396979922086,0.258416759169329,0.35576626268671,1.00416183829401,0,0,0.24406205754817,0.367663080345869,0,0.535798369704479,0,0.788280363383256,0,0.949265659568129,0.732806975721629,0,0,0.436094052142534,2.48485975847659,2.15271869829786,1.32409180813219,2.86836620748814,0.354668382198357,0,1.06748995729705,3.7000132262574,0.933633106199299,1.21239604862719,0.653847612453835,0.302714855289863,3.45705554687999,0,0,0,0.298897361103602,0,0,0,0.204154171254893,0.122834317311768,0.103325781175765,2.37600571456411,2.22540236350701,0,0.718618141816238,0.336672227908132,0.375355559615893,0,0,1.5324389789951,0.901428353439581,1.47461838108027,1.61450672119976,2.98980344345994,1.90738711043606,1.20036438433761,1.33968288009971,1.28820270022815,0.744467425326359,0.337552664482532,1.16924406193438,0.252433774244115,1.10459878370759,0.161646056818812,5.68015348026583,0.806016785821122,0.339121184620975,2.31913023795956,4.90943017063502,2.00763216772303,0,0.132529768321485,0.580969714347592,0.10366105501537,0.252320850875628,0.36497735907583,3.12899064659632,8.36213219650751,0,0.464367928031979,0,1.0647612003586,0.842923450390509,1.92808823906786,1.21323370005633,1.74303555273925,0.237270619111097,1.75280700608214,0.588664395376038,1.15424147083917,0,0,0.4115740113314,0,0,2.94848165003288,0.590789906681404,0,0.122988438543114,2.05881372358231,0.658501712451753,0,0.100528972411631,0.462942225792648,0,0,1.44331342025273,0.231860809950154,0.821860859650752,0.433099343283221,1.38895653772983,1.14152491340759,0.790204397959275,0.858486162094873,0,0,0,0.93733833986777,3.19166043577833,5.52922879245307,0.0895585227028483,0.290633938513962,0,0,0,0,0,0,0,0,1.17217447210047,0,0.514137463516618,0.600686115687835,0,0,0,0.5867062865676,3.23179289394444,0,0.845302752556,1.06375246633948,1.04007436911366,0,0,0,3.43147184779554,1.08524321078289,0.823240336780769,0,3.55391948742546,2.37585561880029,0.904318131178758,1.74306691720059,8.29775826811074,0,0,0,0.239624855491583,1.14861935834114,0,6.80472141337622,1.64381058040307,1.79060963239896,0,0,0,0,0.254094624222463,1.30139853857622,0,0.167516265334349,0,0,0,0,0.981531933753119,1.00034104211935,1.08506009479894,2.49565033836969,7.49401752948079,1.26161932027148,2.6942525448324,0.300946099727719,0,1.03473071292505,1.32845119707087,0.737476674166813,0.434418072340414,0,0,0,0,0,0,0,0,0.496215615637554,0.460385919864187,1.12264037773229,1.79394808957981,1.53512174720011,3.86049410744658,1.48418066444991,1.54209693802656,1.24293207719189,0.246381468041427,2.07701771673448,0.464841513839837,0,4.0101294060657,0.276242966807689,0.459257792658427,2.54927635209404,1.18011973463482,0,0.770153371044148,0,0,0.527758144464379,0,0.170093705276516,1.94324324491925,0,0.541892875087706,0.501689773854853,0,0,0.447749509444357,0,0,0,0,0.325378394664303,0.309123034943167,0.732555718546747,0.247528499761764,0,0,4.82051789532479,0.193341436584244,0.308097234229289,1.22802939780904,0.689182862422653,1.07420244868274,1.59518363305651,0.681813019328807,0.267096106940212,4.29740779938543,1.53752053892085,1.65896526242959,2.023155617111,6.507837690162,19.5183655034997,2.0911118104818,1.54016790088044,1.06461206063404,0.869932992075073,2.59453906745488,5.29562080945368,0,1.89827654831236,2.2875623270859,0,0.855877976067841,0.318203247925937,4.70969184119538,1.2591072030832,1.09814811894422,1.17812402345686,0.606547444719948,11.0957224821106,0.842516912477962,0,9.99225307488266,6.33900880540533,0.136499911407986,1.27264888758341,1.13008116620243,1.10273068709225,12.6053405295832,11.8381739018516,0,0,0.811641507850816,0.30982349809975,1.12678241012897,1.14729081763241,1.57198465620994,1.426684205925,1.06428319221179,1.26664581178598,0.329294892959902,0,0,0,0.670302275535787,0,0.0941438007767792,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540911356951966,0,0,0,0.439524537815682,0,0,0,0.71623345421307,0,0.307160702099232,0,0.140669416410513,1.55832187032068,0.16480387422676,0.63337622438398,0.996239941255349,0,0.755798243562828,0.409074730008619,0.738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| |||
|short_description=p@chr3:145824416..145824437,- | |||
}} |
Latest revision as of 16:37, 29 July 2015
Short description: | p@chr3:145824416..145824437, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:145824416..145824437, - |
Coexpression cluster: | C1512_Smooth_hepatic_mesenchymal_Mallassezderived_Small_Gingival_Ewing |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 1.69e-15 | 32 |
muscle precursor cell | 4.32e-14 | 58 |
myoblast | 4.32e-14 | 58 |
multi-potent skeletal muscle stem cell | 4.32e-14 | 58 |
smooth muscle cell | 5.68e-14 | 43 |
smooth muscle myoblast | 5.68e-14 | 43 |
mesodermal cell | 1.31e-13 | 121 |
muscle cell | 3.37e-12 | 55 |
mesothelial cell | 2.01e-10 | 19 |
electrically responsive cell | 5.15e-10 | 61 |
electrically active cell | 5.15e-10 | 61 |
aortic smooth muscle cell | 2.63e-08 | 10 |
embryonic cell | 5.70e-08 | 250 |
multi fate stem cell | 7.11e-07 | 427 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 8.29e-12 | 14 |