FFCP PHASE1:Hg19::chr3:132378919..132378959,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84129 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30211 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000469042_5end | |||
|cluster_id=chr3:132378919..132378959,- | |||
|description=CAGE_peak_2_at_ACAD11_5end | |||
|id=chr3:132378919..132378959,- | |||
|ontology_enrichment_celltype=CL:0000542!4.78e-17!53;CL:0000051!4.78e-17!53;CL:0000838!5.86e-17!52;CL:0000791!3.32e-10!18;CL:0000789!3.32e-10!18;CL:0002420!3.32e-10!18;CL:0002419!3.32e-10!18;CL:0000790!3.32e-10!18;CL:0000084!8.74e-09!25;CL:0000827!8.74e-09!25;CL:0000945!4.71e-08!24;CL:0000826!4.71e-08!24;CL:0000625!6.26e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000791;9.17e-11;18!CL:0000789;9.17e-11;18!CL:0002419;9.17e-11;18!CL:0000542;1.84e-10;53!CL:0000084;3.95e-09;25!CL:0000945;1.94e-08;24!CL:0000625;3.66e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,1.43e-18,53;CL:0000051,1.43e-18,53;CL:0000838,1.81e-18,52;CL:0000791,3.09e-11,18;CL:0000789,3.09e-11,18;CL:0002420,3.09e-11,18;CL:0002419,3.09e-11,18;CL:0000790,3.09e-11,18;CL:0000084,2.50e-09,25;CL:0000827,2.50e-09,25;CL:0000945,7.89e-09,24;CL:0000826,7.89e-09,24;CL:0000625,1.42e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000790;9.17e-11;18!CL:0000051;1.84e-10;53!UBERON:0006601;1.40e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.18e-20!115;UBERON:0001049!2.22e-17!57;UBERON:0005068!2.22e-17!57;UBERON:0006241!2.22e-17!57;UBERON:0007135!2.22e-17!57;UBERON:0001017!3.89e-15!82;UBERON:0000955!4.01e-15!69;UBERON:0006238!4.01e-15!69;UBERON:0002616!8.13e-15!59;UBERON:0002780!8.85e-15!41;UBERON:0001890!8.85e-15!41;UBERON:0006240!8.85e-15!41;UBERON:0003080!1.08e-14!42;UBERON:0000073!2.71e-14!94;UBERON:0001016!2.71e-14!94;UBERON:0005743!6.28e-14!86;UBERON:0001893!1.49e-11!34;UBERON:0002020!1.94e-11!34;UBERON:0003528!1.94e-11!34;UBERON:0002791!3.29e-11!33;UBERON:0002346!3.39e-11!90;UBERON:0001869!2.21e-10!32;UBERON:0003075!4.73e-10!86;UBERON:0007284!4.73e-10!86;UBERON:0000153!7.98e-09!129;UBERON:0007811!7.98e-09!129;UBERON:0000924!1.19e-08!173;UBERON:0006601!1.19e-08!173;UBERON:0003056!4.02e-08!61;UBERON:0002619!6.88e-08!22;UBERON:0004121!8.67e-08!169;UBERON:0000956!1.66e-07!25;UBERON:0000203!1.66e-07!25;UBERON:0000033!2.27e-07!123;UBERON:0001950!2.46e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.01e-11;41!UBERON:0001890;1.01e-11;41!UBERON:0000073;4.98e-11;53!UBERON:0002616;4.98e-11;53!UBERON:0001893;4.45e-10;34!UBERON:0003528;4.62e-10;34!UBERON:0002020;4.62e-10;34!UBERON:0002791;9.50e-10;32!UBERON:0001869;1.72e-09;32!UBERON:0002619;5.43e-08;22!UBERON:0000955;1.49e-07;68!UBERON:0000956;1.70e-07;25!UBERON:0000203;1.70e-07;25!UBERON:0001950;1.94e-07;20!UBERON:0001016;2.68e-07;83!UBERON:0001017;3.60e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.29e-19,114;UBERON:0001049,5.62e-19,56;UBERON:0005068,5.62e-19,56;UBERON:0006241,5.62e-19,56;UBERON:0007135,5.62e-19,56;UBERON:0000073,1.19e-17,53;UBERON:0002616,1.19e-17,53;UBERON:0000955,2.52e-16,68;UBERON:0006238,2.52e-16,68;UBERON:0002780,8.31e-16,41;UBERON:0001890,8.31e-16,41;UBERON:0003080,8.31e-16,41;UBERON:0006240,8.31e-16,41;UBERON:0001016,1.13e-15,89;UBERON:0001017,2.77e-15,81;UBERON:0002346,4.28e-14,86;UBERON:0003075,9.78e-13,82;UBERON:0007284,9.78e-13,82;UBERON:0001893,3.18e-12,34;UBERON:0003528,4.25e-12,34;UBERON:0002020,4.25e-12,34;UBERON:0002791,3.25e-11,32;UBERON:0001869,6.26e-11,32;UBERON:0010371,2.20e-09,104;UBERON:0004121,2.20e-09,171;UBERON:0000924,2.20e-09,171;UBERON:0006601,2.20e-09,171;UBERON:0003056,2.32e-09,61;UBERON:0002619,3.44e-08,22;UBERON:0000956,9.39e-08,25;UBERON:0000203,9.39e-08,25;UBERON:0001950,1.43e-07,20 | |||
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| |||
|short_description=p2@ACAD11 | |||
}} |
Latest revision as of 20:33, 24 September 2015
Short description: | p2@ACAD11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ACAD11_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000469042_5end |
EntrezGene: | ACAD11 |
HGNC: | 30211 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 1.43e-18 | 53 |
common lymphoid progenitor | 1.43e-18 | 53 |
lymphoid lineage restricted progenitor cell | 1.81e-18 | 52 |
mature alpha-beta T cell | 3.09e-11 | 18 |
alpha-beta T cell | 3.09e-11 | 18 |
immature T cell | 3.09e-11 | 18 |
mature T cell | 3.09e-11 | 18 |
immature alpha-beta T cell | 3.09e-11 | 18 |
T cell | 2.50e-09 | 25 |
pro-T cell | 2.50e-09 | 25 |
lymphocyte of B lineage | 7.89e-09 | 24 |
pro-B cell | 7.89e-09 | 24 |
CD8-positive, alpha-beta T cell | 1.42e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
adult organism | 3.29e-19 | 114 |
neural tube | 5.62e-19 | 56 |
neural rod | 5.62e-19 | 56 |
future spinal cord | 5.62e-19 | 56 |
neural keel | 5.62e-19 | 56 |
regional part of nervous system | 1.19e-17 | 53 |
regional part of brain | 1.19e-17 | 53 |
brain | 2.52e-16 | 68 |
future brain | 2.52e-16 | 68 |
regional part of forebrain | 8.31e-16 | 41 |
forebrain | 8.31e-16 | 41 |
anterior neural tube | 8.31e-16 | 41 |
future forebrain | 8.31e-16 | 41 |
nervous system | 1.13e-15 | 89 |
central nervous system | 2.77e-15 | 81 |
neurectoderm | 4.28e-14 | 86 |
neural plate | 9.78e-13 | 82 |
presumptive neural plate | 9.78e-13 | 82 |
telencephalon | 3.18e-12 | 34 |
brain grey matter | 4.25e-12 | 34 |
gray matter | 4.25e-12 | 34 |
regional part of telencephalon | 3.25e-11 | 32 |
cerebral hemisphere | 6.26e-11 | 32 |
ecto-epithelium | 2.20e-09 | 104 |
ectoderm-derived structure | 2.20e-09 | 171 |
ectoderm | 2.20e-09 | 171 |
presumptive ectoderm | 2.20e-09 | 171 |
pre-chordal neural plate | 2.32e-09 | 61 |
regional part of cerebral cortex | 3.44e-08 | 22 |
cerebral cortex | 9.39e-08 | 25 |
pallium | 9.39e-08 | 25 |
neocortex | 1.43e-07 | 20 |