FFCP PHASE1:Hg19::chr3:131718082..131718086,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr3:131718082..131718086,- | |||
|coexpression_cluster_id=C90 | |||
|description=CAGE_peak_at_chr3:131718082..131718086,- | |||
|id=chr3:131718082..131718086,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000167;1.93e-16;1!CL:0000164;1.93e-16;1!CL:0000502;1.93e-16;1!CL:0000172;1.93e-16;1!CL:0000173;1.93e-16;1!CL:1000415;4.70e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,1.93e-16,1;CL:0000164,1.93e-16,1;CL:0000502,1.93e-16,1;CL:0000172,1.93e-16,1;CL:0000173,1.93e-16,1;CL:0002351,1.93e-16,1;CL:1000415,5.08e-09,2 | |||
|ontology_enrichment_development_v019=CL:0002351;1.93e-16;1 | |||
|ontology_enrichment_disease=DOID:171!3.81e-08!10 | |||
|ontology_enrichment_disease_v019=DOID:171;5.65e-25;10!DOID:4430;1.93e-16;1!DOID:3095;1.51e-11;22!DOID:2994;1.51e-11;22!DOID:3910;6.93e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:171,5.65e-25,10;DOID:4430,1.93e-16,1;DOID:3095,1.51e-11,22;DOID:2994,1.51e-11,22;DOID:3910,6.42e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0002780!3.18e-34!41;UBERON:0001890!3.18e-34!41;UBERON:0006240!3.18e-34!41;UBERON:0000956!1.39e-33!25;UBERON:0000203!1.39e-33!25;UBERON:0001893!1.96e-33!34;UBERON:0003080!3.14e-33!42;UBERON:0001869!3.41e-33!32;UBERON:0002791!1.28e-31!33;UBERON:0002619!2.33e-31!22;UBERON:0002020!1.09e-30!34;UBERON:0003528!1.09e-30!34;UBERON:0001950!2.17e-27!20;UBERON:0002346!6.73e-27!90;UBERON:0001049!4.55e-26!57;UBERON:0005068!4.55e-26!57;UBERON:0006241!4.55e-26!57;UBERON:0007135!4.55e-26!57;UBERON:0001017!1.76e-25!82;UBERON:0002616!6.63e-25!59;UBERON:0000955!1.41e-24!69;UBERON:0006238!1.41e-24!69;UBERON:0003056!2.14e-24!61;UBERON:0005743!7.73e-24!86;UBERON:0000073!4.58e-22!94;UBERON:0001016!4.58e-22!94;UBERON:0003075!1.03e-21!86;UBERON:0007284!1.03e-21!86;UBERON:0007023!9.65e-16!115;UBERON:0000924!3.87e-15!173;UBERON:0006601!3.87e-15!173;UBERON:0000033!5.03e-13!123;UBERON:0000200!5.49e-13!6;UBERON:0001872!3.12e-12!5;UBERON:0004121!5.36e-12!169;UBERON:0000153!5.37e-12!129;UBERON:0007811!5.37e-12!129;UBERON:0000025!2.24e-09!194;UBERON:0001871!3.76e-09!7;UBERON:0000349!2.34e-07!5;UBERON:0002771!7.04e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;1.66e-35;4!UBERON:0000923;1.66e-35;4!UBERON:0010316;1.66e-35;4!UBERON:0005291;1.66e-35;4!UBERON:0002050;1.44e-28;5!UBERON:0005423;1.44e-28;5!UBERON:0004903;6.93e-09;2!UBERON:0002173;6.93e-09;2!UBERON:0002186;6.93e-09;2!UBERON:0001950;4.05e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,6.42e-09,2;UBERON:0002173,6.42e-09,2;UBERON:0002186,6.42e-09,2;UBERON:0002346,3.28e-08,86;UBERON:0001950,3.80e-07,20 | |||
|phase1_expression=0,0,0,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.85870796139317,0.273748850145768,0,0.61130724598361,0.57470412614962,0.393553906568396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473447805734733,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0,1.55210578223795,0.966182642624386,0.261958150995425,0,0,0,0,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0.597743964753209,0,0,0,0.492339221844278,0,0,0,0,0,0,0,0.969332746095218,0.0927680981618513,0,0,0,0,0.227586896570999,1.27126825146383,0,0,6.4153014944316,0,0,0,0,0,0,0.438770794307945,0,0,0,0,0,0,0.434589487688032,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889563386041866,0.123563938946503,0.626531697032732,0.067401132980677,0,0,0,0,0,0,2.41981432097328,0,0,0.300646838828985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569797163602908,2.15106521008283,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05154941711726,0,0.458320848023367,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.544813624446302,0.482259445395058,0.275078873194468,0,0,0,0.668245123238271,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0.26446520348538,0,0.704815022316672,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.122026264901963,0.500763722825999,0,0,0,0.138348634936231,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0.163565394255844,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0.314531883711793,0,2.37625541935635,11.2664707653892,4.08988022054707,0,0,0,0.80057074828547,0,0,0.256916900385838,0,1.11743701340006,0,0.252071696221718,0.414943514785307,0.645902582527404,0,0,0,0,0,0,0,0,0,0.40341013740704,0,0.261906694481422,0,0,0.540300676947157,0.781078098613847,0.826747186004736,0.697573912132975,1.64092442705466,0,0,0.175871244359621,0,0.535701835878287,0.336283722218824,0,0,0,0,0,0.0679697329768317,0.526182188502793,0,0,0.313972371402056,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.846774100381858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,1.17838273550813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0.267964130156178,0,0.310298987585686,0,0,0,0,0,0,0.202117188958219,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr3:131718082..131718086,- | |||
}} |
Latest revision as of 15:52, 29 July 2015
Short description: | p@chr3:131718082..131718086, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:131718082..131718086, - |
Coexpression cluster: | C90_neuroectodermal_peripheral_neuroepithelioma_neuroblastoma_carcinoid_parietal_putamen |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 1.93e-16 | 1 |
enteroendocrine cell | 1.93e-16 | 1 |
type D enteroendocrine cell | 1.93e-16 | 1 |
somatostatin secreting cell | 1.93e-16 | 1 |
pancreatic D cell | 1.93e-16 | 1 |
progenitor cell of endocrine pancreas | 1.93e-16 | 1 |
epithelial cell of gall bladder | 5.08e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 6.42e-09 | 2 |
alveolar duct | 6.42e-09 | 2 |
bronchiole | 6.42e-09 | 2 |
neurectoderm | 3.28e-08 | 86 |
neocortex | 3.80e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 5.65e-25 | 10 |
somatostatinoma | 1.93e-16 | 1 |
germ cell and embryonal cancer | 1.51e-11 | 22 |
germ cell cancer | 1.51e-11 | 22 |
lung adenocarcinoma | 6.42e-09 | 2 |