FFCP PHASE1:Hg19::chr3:129546717..129546727,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23023 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=29116 | |||
|TSSclassifier=strong | |||
|UniProt=O94876 | |||
|association_with_transcript=453bp_to_CR749206_5end | |||
|cluster_id=chr3:129546717..129546727,- | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_29_at_TMCC1_5end | |||
|id=chr3:129546717..129546727,- | |||
|ontology_enrichment_celltype=CL:0000766!6.48e-32!76;CL:0000738!2.81e-29!140;CL:0000037!3.39e-23!172;CL:0000566!3.39e-23!172;CL:0000988!1.38e-22!182;CL:0002057!4.39e-22!42;CL:0002032!9.94e-22!165;CL:0000837!9.94e-22!165;CL:0002087!2.62e-21!119;CL:0000094!1.38e-20!8;CL:0000763!1.47e-20!112;CL:0000049!1.47e-20!112;CL:0000860!2.80e-20!45;CL:0002194!5.41e-20!63;CL:0000576!5.41e-20!63;CL:0000040!5.41e-20!63;CL:0000559!5.41e-20!63;CL:0002009!3.33e-19!65;CL:0000839!4.26e-19!70;CL:0000557!9.59e-19!71;CL:0002031!1.70e-18!124;CL:0002393!2.18e-16!9;CL:0002397!2.18e-16!9;CL:0000081!1.21e-14!11;CL:0000775!2.72e-11!3;CL:0000875!1.20e-09!3;CL:0002396!1.20e-09!3;CL:0000771!3.92e-08!2;CL:0000134!1.62e-07!358;CL:0000815!2.08e-07!2;CL:0000792!2.08e-07!2;CL:0002677!2.08e-07!2;CL:0002320!3.55e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000094;1.32e-98;8!CL:0000081;7.82e-72;11!CL:0000775;1.54e-66;3!CL:0000771;2.55e-45;2!CL:0000767;1.35e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000094,1.03e-98,8;CL:0000081,6.52e-72,11;CL:0000775,1.54e-66,3;CL:0000771,2.55e-45,2;CL:0000766,4.00e-19,72;CL:0000763,9.34e-13,108;CL:0000049,9.34e-13,108;CL:0000738,4.23e-10,136;CL:0000767,1.21e-08,3;CL:0002032,1.70e-08,161;CL:0000837,1.70e-08,161;CL:0000037,3.94e-08,168;CL:0000988,1.06e-07,177 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.88e-18!102;UBERON:0003061!4.88e-18!102;UBERON:0002371!5.73e-16!80;UBERON:0002193!8.86e-16!112;UBERON:0001474!1.92e-14!86;UBERON:0004765!1.95e-11!101;UBERON:0001434!1.95e-11!101;UBERON:0002405!2.34e-09!115;UBERON:0002384!2.87e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15148819429164,0.309632246632152,0,0,0,0,0.142169232487422,0,0.553995408531877,1.00272223735071,0.434021741431704,0.223915474239924,0,0,0.436194716338694,0.377875943688809,0.242584061187816,0.232429036905685,0,0,0,0,0.236482229888585,0.344745680736619,0,0,0.188242339542605,0.272906150057846,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632924774881769,0,0,0.209658645508376,0,0.150176892841506,0.32145117339416,0.285012743741249,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0.764546456250458,0,0.560508562981536,0,0,0,0.205601498999509,0,0.32592226663359,0,0,0,0.294605907474837,0,0.270803863765016,0,0,0,0,0.289803085735052,0,0,1.04535523804977,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.8136500923276,15.511210565933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0.594524649154913,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00451418286425,0,0,0,0,0,0,0,0,0.197030760201927,0,0.256686072559497,0,0,0,0,0,15.7291475028908,2.99161459204025,12.8468809165171,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.431428401637234,0,0,0,0,0.248107807818777,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,0,0,0,0,0.648473311192717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0.552567831062295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p29@TMCC1 | |||
}} |
Latest revision as of 18:21, 24 September 2015
Short description: | p29@TMCC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_29_at_TMCC1_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 453bp_to_CR749206_5end |
EntrezGene: | TMCC1 |
HGNC: | 29116 |
UniProt: | O94876 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte | 1.03e-98 | 8 |
blood cell | 6.52e-72 | 11 |
neutrophil | 1.54e-66 | 3 |
eosinophil | 2.55e-45 | 2 |
myeloid leukocyte | 4.00e-19 | 72 |
myeloid cell | 9.34e-13 | 108 |
common myeloid progenitor | 9.34e-13 | 108 |
leukocyte | 4.23e-10 | 136 |
basophil | 1.21e-08 | 3 |
hematopoietic oligopotent progenitor cell | 1.70e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.70e-08 | 161 |
hematopoietic stem cell | 3.94e-08 | 168 |
hematopoietic cell | 1.06e-07 | 177 |