FFCP PHASE1:Hg19::chr3:128208189..128208211,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=89bp_to_ENST00000473958_5end | |||
|cluster_id=chr3:128208189..128208211,+ | |||
|description=CAGE_peak_3_at_ENST00000473958_5end | |||
|id=chr3:128208189..128208211,+ | |||
|ontology_enrichment_celltype=CL:0002274!3.39e-07!5;CL:0000457!3.39e-07!5;CL:0002191!3.39e-07!5;CL:0000097!3.39e-07!5;CL:0000831!3.39e-07!5;CL:0002028!3.39e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000222;6.31e-21;1!CL:0002586;7.26e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002586,6.78e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!6.68e-11!235;DOID:14566!2.63e-10!239;DOID:0050687!3.52e-10!143;DOID:305!1.15e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001737!6.83e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;1.13e-18;10!UBERON:0000178;1.11e-12;15!UBERON:0000179;1.11e-12;15!UBERON:0000463;1.11e-12;15!UBERON:0000478;3.72e-08;24!UBERON:0001781;7.26e-08;3!UBERON:0001782;7.26e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,1.21e-18,10;UBERON:0000358,1.21e-18,10;UBERON:0000307,1.21e-18,10;UBERON:0000091,1.21e-18,10;UBERON:0000087,1.21e-18,10;UBERON:0007010,1.21e-18,10;UBERON:0007806,1.21e-18,10;UBERON:0008780,1.21e-18,10;UBERON:0005728,1.21e-18,10;UBERON:0000178,1.15e-12,15;UBERON:0000179,1.15e-12,15;UBERON:0000463,1.15e-12,15;UBERON:0000478,3.81e-08,24;UBERON:0001782,6.78e-08,3;UBERON:0005424,6.78e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64342657158052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0.694281003215189,0,0.838998872419812,0,0,0,0.35576626268671,0,0.402829317109147,0,0,0,0,0.267899184852239,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0.211931901159562,1.20036438433761,0.103052529238439,0,0.18611685633159,0.506328996723799,0.0974370051611986,0.252433774244115,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0,0.241011029883482,0.110293972732394,0,0.237270619111097,0.134831308160164,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0.176096868026452,0.207328115540772,0.144119953416961,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0.623912584592421,0.356857977594324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0,0,0.393373244878272,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0.512900250232778,1.31205858279882,0.650756789328606,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,5.44802762750113,0,0,0,0,0,0,0.199579371432817,0.191505370132367,0,0,0.280797178113459,0,0,0,0.169291777801603,0.1605880751037,0,0,0,0.307240764308458,0,0,0,0.278406173895242,0,0.540911356951966,0,0,0,0,0.242721043499027,0,0.284136146806413,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0.254253650292766,0.472775363535873,0,0,0.173624994933292,0,0,0,0,0,0,0.435753854075961,0.139423744278603,0.153900517007594,0,0,0.0897576444097721,0.217294743844016,0,0,0,0,0.156980256395025,0.166211681900156,0.225595660617181,0,0.335643173951685,0.189753732724185,0.317873157960757,0,0,0.141353071433941,0.216388639742091,0,0,0,4.15129580152871,2.59484271787656,2.50612678813093,0,0,0,0,0,0,0,0,0,0.189559738885464,0.150323419414493,0,0,0,0,0,0,0,0,0.0979923974143777,0,0.17472666824203,0,1.16107597546902,1.46178634172371,0.656923656425674,0.0969890164884194,0,0,0,0,0.189932387867636,0.977756913674015,0,0,0.39961921916426,0.288180834308212,0.229073192331831,0,0,0,0.235694034616795,0,0,0.101998217636322,0,0,0,0,0,0.525774708558629,0,0.229160424011684,0,0,0,0,0.134366944973453,0,0,0.0787831823072236,0.0824158583811665,0.0674035438541849,0.0984274815147488,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.236417121897595,0.0524545881349981,0,0,0,0,0,0.25426853765475,0,0,0,0,0.082092520749339,0,0.226624183040251,0,0,0,0.13223260174269,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0.151649117541648,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26184898228651,0,0.428883182749851,0,0,0,0,0,0,0,0,0,0,0,0,0.607719912354764,0,0,0,0,0.327609848846413,0.245772908753719,0,0,0,0,0,0,0,0,0,0.323474434190045,0,0.109209638192014,0.848662649770126,0,0.123935764259002,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0,0,0,0,0,0.231051332300676,0,0,0,0.0752103283492573,0,0,0,0.49131575253029,0,0.0675375846183947,0,0,0,0,0,0,0.175871244359621,0,0.535701835878287,0.336283722218824,0,0,0.0887023701626388,0,0,0.0679697329768317,0,0,0.111231401892069,0.313972371402056,0,0,0,0,0,0.0714765441766563,0,0,0,0.801711364730253,0,0,0,0,0,0,0.423387050190929,0.22910686854405,0,0,0.111855431797792,0,0,0,0,0,0,0.233939463462106,0,0,0,0,0.150962843566674,0.154348316215889,0,0,0,0,0,0,0,0.169927114687817,0.375935671919414,0.515663103788617,0,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0.0645889098360061,0,0,0.0636471582781649,0.202117188958219,0,0,0,0,0,0,0.106727345877715,0,0,0,0.366724332548599,0.813792356631477,0,0,0 | |||
|short_description=p3@ENST00000473958 | |||
}} |
Latest revision as of 15:32, 29 July 2015
Short description: | p3@ENST00000473958 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ENST00000473958_5end |
Coexpression cluster: | NA |
Association with transcript: | 89bp_to_ENST00000473958_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 6.78e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 1.21e-18 | 10 |
blastocyst | 1.21e-18 | 10 |
blastula | 1.21e-18 | 10 |
bilaminar disc | 1.21e-18 | 10 |
inner cell mass | 1.21e-18 | 10 |
cleaving embryo | 1.21e-18 | 10 |
connecting stalk | 1.21e-18 | 10 |
inner cell mass derived epiblast | 1.21e-18 | 10 |
extraembryonic mesoderm | 1.21e-18 | 10 |
blood | 1.15e-12 | 15 |
haemolymphatic fluid | 1.15e-12 | 15 |
organism substance | 1.15e-12 | 15 |
extraembryonic structure | 3.81e-08 | 24 |
pigmented layer of retina | 6.78e-08 | 3 |
presumptive retinal pigmented epithelium | 6.78e-08 | 3 |