FFCP PHASE1:Mm9::chr11:82721862..82721902,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=217011|HGNC=|MCL_coexpression_id=155|UniProt=Q3URT5,Q8VEJ4|association_with_transcript=0bp_to_NM_145431,uc007knt.2_5end|description=CAGE_peak_1_at_Nle1_5end|id=chr11:82721862..82721902,-|ontology_enrichment_celltype=CL:0000988!2.54e-12!32;CL:0002032!2.54e-12!32;CL:0000037!2.54e-12!32;CL:0000566!2.54e-12!32;CL:0000837!2.54e-12!32;CL:0002320!1.86e-09!46;CL:0000134!1.86e-09!46;CL:0002031!8.57e-09!25;CL:0000084!6.70e-08!11;CL:0000827!6.70e-08!11;CL:0000838!9.47e-08!12;CL:0000542!1.01e-07!13;CL:0000051!1.01e-07!13;CL:0000219!1.18e-07!54;CL:0000063!2.62e-07!66;CL:0000034!2.91e-07!97;CL:0000791!6.03e-07!9;CL:0000789!6.03e-07!9;CL:0002420!6.03e-07!9;CL:0002419!6.03e-07!9;CL:0000790!6.03e-07!9|ontology_enrichment_celltype_v019_2=CL:0000988,2.54e-12,32;CL:0002032,2.54e-12,32;CL:0000037,2.54e-12,32;CL:0000837,2.54e-12,32;CL:0002320,1.85e-09,46;CL:0000134,1.85e-09,46;CL:0002031,8.56e-09,25;CL:0000084,6.70e-08,11;CL:0000827,6.70e-08,11;CL:0000838,9.47e-08,12;CL:0000542,1.01e-07,13;CL:0000051,1.01e-07,13;CL:0000219,1.18e-07,54;CL:0000034,2.96e-07,97;CL:0000791,6.03e-07,9;CL:0000789,6.03e-07,9;CL:0002420,6.03e-07,9;CL:0002419,6.03e-07,9;CL:0000790,6.03e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!1.86e-09!46;UBERON:0002193!6.28e-09!48;UBERON:0002390!1.00e-08!45;UBERON:0003061!1.00e-08!45|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.85e-09,46;UBERON:0002193,6.28e-09,48;UBERON:0002405,6.28e-09,48;UBERON:0002390,1.00e-08,45;UBERON:0003061,1.00e-08,45|phase1_expression=7.52699581392532,2.44282785347553,0.454999239389536,0.90739263392049,0.500895729946347,11.5836697619204,9.34450562382103,15.6239221364307,26.3274910423617,34.1734208430111,64.3779560527899,59.749347087507,16.0928686135333,19.2324885321794,15.3230490435205,13.3633676477285,12.5921138063066,12.3030244489713,10.6949258212476,8.06340338416257,4.25216450755349,13.5035693633204,14.8883879809193,8.15961356246374,7.79991555628378,1.72269589234506,6.46142994238612,8.61884930743556,3.23039813075836,8.56902441183765,10.6430645114546,50.8024538767705,79.9584223859941,63.3926724061755,16.4645423258227,15.4598220183398,15.7210404322024,0.837063261473815,1.5626706890476,1.57057123192139,0,0,0,5.91715044485213,6.69087746048796,6.9747765821439,7.04152209913235,7.41285531693518,4.83309602015838,5.44403717407994,6.01941612989059,2.87505128729943,8.05356509077134,14.5072428402269,14.1159395639835,4.63066984864705,2.86533439938757,1.54701627683233,8.9019242778223,6.34789175126439,8.23980824558033,10.8430250262122,6.22506357277798,15.2982951937838,9.88866362566974,12.7886420690298,8.08920298399693,4.2264013585371,8.8136170462206,7.56033254657468,8.2026734927039,6.85562362569129,8.1721360152097,8.08439274818697,9.87208351487835,10.1114066527102,6.60695285996332,3.95830748064082,4.14737639791857,8.30883612700221,9.14876436024097,6.77187381723788,4.4669279840221,6.75315132038016,6.41752640662602,7.07108605136802,6.69146899755784,6.52398060388552,14.387976733305,4.60986516651392,4.34796733052517,7.74381489283248,19.7191686775248,3.77792234146472,5.19821133958135,4.92829575807069,3.37066608316204,4.4311883870295,6.23486411046885,2.12003744706204,4.50698943285378,7.69958864485907,5.09610479413291,7.11066703153331,9.30911476348221,6.84071636782766,7.07734223020697,2.96878087269556,7.76813650941515,4.45326417194474,9.36820764537134,7.00270600117925,9.4552353874984,7.53613202763113,4.46837087115678,5.90632979249475,2.47194967734374,2.89198713839823,8.84610551949874,7.117741397686,7.06692859073259,6.78825354389311,0,5.5628351432194,6.91174132484402,8.68553987709211,15.2165208122519,23.3962065087429,14.1047952051102,4.6435098215495,1.83000241127451,7.53926112677186,4.69325664519146,2.81287003063364,3.74018480207208,4.38051410282946,7.94347038032467,4.60305791257344,2.0217820674694,4.20883711772948,9.62891277924007,10.1156925950728,8.82304436046211,6.63101198477146,9.45707338203457,7.30248205623644,7.49613796477831,4.39795730256327,11.2095356325078,9.07709184805532,9.14945845652534,14.4669183402199,9.17555922444473,5.92028683087683,7.40815691068596,10.7478504081986,24.5774615559632,23.6760074545538,18.4706274607135,6.00664740352955,5.62862543954631,7.02242039697958,7.10234206755631,4.9191057936851,4.62801338662135,5.11574678450897,2.95100741539581,5.02090972178829,5.10135534731789,3.77585167381919,3.08061476274252,3.36259971078264,4.39100230582101,3.22095405024892,4.41608891984667,5.14523061896422,1.98251269790279,6.34681359992506,8.53153002140936,10.4506502337197,8.63411990858025,8.87407508342707,8.00560957841533,4.1849637744763,4.74529061544512,5.43506550589236,4.52403375840485,3.78017296878187,4.874102177978,5.39291645192533,4.53889904736858,3.78368419183298,17.6391147886366,9.93962059704641,10.1436962105772,7.127796474586,6.40043207653165,7.36426108848345,3.85742876457969,3.83786384746966,2.19798218977925,3.20832626196681,2.96452627087149,13.6812986687197,14.9384836286034,11.9176919563972,10.1430060694251,8.68237775108701,8.14802725700543,7.48009957372108,9.56597837972709,5.49122826376163,2.87536413054709,2.23284568601102,4.99260276983297,2.77836765741823,3.76734568396016,3.37710464954357,4.80358294433172,11.9379589415405,11.2445833744998,11.712410918488,10.7957514212711,5.52770649557992,4.04674189506223,5.26860849216057,4.88668946729192,3.98636441367795,4.46473352240964,4.26044618260919,3.7990696010497,2.16973587872267,3.01582567878545,4.89515115436839,6.39293554924747,7.72622889653251,4.97706828962155,4.68846746368813,9.01642199571715,1.51482556322624,6.94118082715765,6.63745865304285,5.38558494331997,7.64700153448166,7.79795359288379,6.22768367735431,4.45291771842384,5.84511715822624,5.13874111330481,8.35435422696698,6.52924391958036,8.54714897602825,8.79589580509311,6.10389454998381,18.5843193675948,10.1967867185092,13.9068836203785,9.9960692270626,15.0603965369194,13.8345816574767,8.78656196771952,13.8142817201452,14.2598951353889,18.6461687182131,14.7586052004998,14.4389760547462,7.14923172082955,7.56256594931503,9.05510786479281,6.43011105094777,5.32020700926821,4.99432689285798,6.08831376227848,8.22055362609418,5.63212099352905,2.1183207086382,5.29268155331909,4.9465875882444,6.45857706783622,8.68506118965444,7.75920236020387,7.38634048852776,6.70405924248657,4.26478194624172,9.3978984438819,9.49379592630823,8.14855920426731,7.91147519419702,6.56132293060921,7.32090154260872,14.4481665494777,11.7559219951873,11.746997773376,7.63736494412091,11.704431762502,8.53941761932765,6.80433647177348,5.43629569637619,6.76923947613151,6.33862428008657,5.62043498932284,4.18809507174447,3.36998930558661,5.59205381778233,3.38215763210514,9.27002585472668,9.76205093696876,7.19469396872976,6.71631082084202,6.08242051766801,6.21993364822496,7.42164993610516,7.44501345422547,2.65742532908607,2.88030006257865,6.32022241256356,12.9744137785705,14.6876668745703,12.9920822977795,8.77230808770659,9.93406773906325,11.658958603437,10.9290250109187,8.58214824559255,10.05929847846,7.56196388526304,6.33476224808391,7.11967628138438,4.79195298944433,6.57518112484113,12.2092274355736,14.1747893442972,9.40153851638839,5.02292944483695,4.69206188627955,9.34073283763052,11.1471557121114,8.52672576860118,7.34177395402186,0.460325236507177,6.30185064783336,3.95262319390481,4.11049511862385,6.7985450765073,4.05013500139084,4.95353323546643,3.62513927187364,3.10656187051092,7.9916257639816,9.17757208822371,10.4147499510022,11.1829089851415,8.38452650511929,6.80220981265052,5.11167473943715,5.56294654545014,6.09746498224449,5.81203587056734,7.09742039692671,5.09291121742406,5.24392441831341,6.72264100251127,5.51380501973887,5.23923060411381,7.18482820858104,6.55891349576597,7.00546031365621,6.18235464564469,2.40008476669791,7.27650805253284,6.43777712857767,4.94177816549917,5.64656282491984,5.24610568928394,7.68297486065645,4.20911538300549,5.83957689537206,3.36685362994643,7.3553711236988,5.22073756590486,6.13846564754534,6.66228417099654,4.62975866354739,8.74337022782811,6.78401664491684,6.87587372954555,8.60797494309795,4.41182838239031,6.26043156175138|short_description=p1@Nle1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=217011 | |||
|HGNC= | |||
|MCL_coexpression_id=155 | |||
|TSSclassifier=NA | |||
|UniProt=Q3URT5,Q8VEJ4 | |||
|association_with_transcript=0bp_to_NM_145431,uc007knt.2_5end | |||
|cluster_id=chr11:82721862..82721902,- | |||
|description=CAGE_peak_1_at_Nle1_5end | |||
|id=chr11:82721862..82721902,- | |||
|ontology_enrichment_celltype=CL:0000988!2.54e-12!32;CL:0002032!2.54e-12!32;CL:0000037!2.54e-12!32;CL:0000566!2.54e-12!32;CL:0000837!2.54e-12!32;CL:0002320!1.86e-09!46;CL:0000134!1.86e-09!46;CL:0002031!8.57e-09!25;CL:0000084!6.70e-08!11;CL:0000827!6.70e-08!11;CL:0000838!9.47e-08!12;CL:0000542!1.01e-07!13;CL:0000051!1.01e-07!13;CL:0000219!1.18e-07!54;CL:0000063!2.62e-07!66;CL:0000034!2.91e-07!97;CL:0000791!6.03e-07!9;CL:0000789!6.03e-07!9;CL:0002420!6.03e-07!9;CL:0002419!6.03e-07!9;CL:0000790!6.03e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,2.54e-12,32;CL:0002032,2.54e-12,32;CL:0000037,2.54e-12,32;CL:0000837,2.54e-12,32;CL:0002320,1.85e-09,46;CL:0000134,1.85e-09,46;CL:0002031,8.56e-09,25;CL:0000084,6.70e-08,11;CL:0000827,6.70e-08,11;CL:0000838,9.47e-08,12;CL:0000542,1.01e-07,13;CL:0000051,1.01e-07,13;CL:0000219,1.18e-07,54;CL:0000034,2.96e-07,97;CL:0000791,6.03e-07,9;CL:0000789,6.03e-07,9;CL:0002420,6.03e-07,9;CL:0002419,6.03e-07,9;CL:0000790,6.03e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!1.86e-09!46;UBERON:0002193!6.28e-09!48;UBERON:0002390!1.00e-08!45;UBERON:0003061!1.00e-08!45 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.85e-09,46;UBERON:0002193,6.28e-09,48;UBERON:0002405,6.28e-09,48;UBERON:0002390,1.00e-08,45;UBERON:0003061,1.00e-08,45 | |||
|phase1_expression=7.52699581392532,2.44282785347553,0.454999239389536,0.90739263392049,0.500895729946347,11.5836697619204,9.34450562382103,15.6239221364307,26.3274910423617,34.1734208430111,64.3779560527899,59.749347087507,16.0928686135333,19.2324885321794,15.3230490435205,13.3633676477285,12.5921138063066,12.3030244489713,10.6949258212476,8.06340338416257,4.25216450755349,13.5035693633204,14.8883879809193,8.15961356246374,7.79991555628378,1.72269589234506,6.46142994238612,8.61884930743556,3.23039813075836,8.56902441183765,10.6430645114546,50.8024538767705,79.9584223859941,63.3926724061755,16.4645423258227,15.4598220183398,15.7210404322024,0.837063261473815,1.5626706890476,1.57057123192139,0,0,0,5.91715044485213,6.69087746048796,6.9747765821439,7.04152209913235,7.41285531693518,4.83309602015838,5.44403717407994,6.01941612989059,2.87505128729943,8.05356509077134,14.5072428402269,14.1159395639835,4.63066984864705,2.86533439938757,1.54701627683233,8.9019242778223,6.34789175126439,8.23980824558033,10.8430250262122,6.22506357277798,15.2982951937838,9.88866362566974,12.7886420690298,8.08920298399693,4.2264013585371,8.8136170462206,7.56033254657468,8.2026734927039,6.85562362569129,8.1721360152097,8.08439274818697,9.87208351487835,10.1114066527102,6.60695285996332,3.95830748064082,4.14737639791857,8.30883612700221,9.14876436024097,6.77187381723788,4.4669279840221,6.75315132038016,6.41752640662602,7.07108605136802,6.69146899755784,6.52398060388552,14.387976733305,4.60986516651392,4.34796733052517,7.74381489283248,19.7191686775248,3.77792234146472,5.19821133958135,4.92829575807069,3.37066608316204,4.4311883870295,6.23486411046885,2.12003744706204,4.50698943285378,7.69958864485907,5.09610479413291,7.11066703153331,9.30911476348221,6.84071636782766,7.07734223020697,2.96878087269556,7.76813650941515,4.45326417194474,9.36820764537134,7.00270600117925,9.4552353874984,7.53613202763113,4.46837087115678,5.90632979249475,2.47194967734374,2.89198713839823,8.84610551949874,7.117741397686,7.06692859073259,6.78825354389311,0,5.5628351432194,6.91174132484402,8.68553987709211,15.2165208122519,23.3962065087429,14.1047952051102,4.6435098215495,1.83000241127451,7.53926112677186,4.69325664519146,2.81287003063364,3.74018480207208,4.38051410282946,7.94347038032467,4.60305791257344,2.0217820674694,4.20883711772948,9.62891277924007,10.1156925950728,8.82304436046211,6.63101198477146,9.45707338203457,7.30248205623644,7.49613796477831,4.39795730256327,11.2095356325078,9.07709184805532,9.14945845652534,14.4669183402199,9.17555922444473,5.92028683087683,7.40815691068596,10.7478504081986,24.5774615559632,23.6760074545538,18.4706274607135,6.00664740352955,5.62862543954631,7.02242039697958,7.10234206755631,4.9191057936851,4.62801338662135,5.11574678450897,2.95100741539581,5.02090972178829,5.10135534731789,3.77585167381919,3.08061476274252,3.36259971078264,4.39100230582101,3.22095405024892,4.41608891984667,5.14523061896422,1.98251269790279,6.34681359992506,8.53153002140936,10.4506502337197,8.63411990858025,8.87407508342707,8.00560957841533,4.1849637744763,4.74529061544512,5.43506550589236,4.52403375840485,3.78017296878187,4.874102177978,5.39291645192533,4.53889904736858,3.78368419183298,17.6391147886366,9.93962059704641,10.1436962105772,7.127796474586,6.40043207653165,7.36426108848345,3.85742876457969,3.83786384746966,2.19798218977925,3.20832626196681,2.96452627087149,13.6812986687197,14.9384836286034,11.9176919563972,10.1430060694251,8.68237775108701,8.14802725700543,7.48009957372108,9.56597837972709,5.49122826376163,2.87536413054709,2.23284568601102,4.99260276983297,2.77836765741823,3.76734568396016,3.37710464954357,4.80358294433172,11.9379589415405,11.2445833744998,11.712410918488,10.7957514212711,5.52770649557992,4.04674189506223,5.26860849216057,4.88668946729192,3.98636441367795,4.46473352240964,4.26044618260919,3.7990696010497,2.16973587872267,3.01582567878545,4.89515115436839,6.39293554924747,7.72622889653251,4.97706828962155,4.68846746368813,9.01642199571715,1.51482556322624,6.94118082715765,6.63745865304285,5.38558494331997,7.64700153448166,7.79795359288379,6.22768367735431,4.45291771842384,5.84511715822624,5.13874111330481,8.35435422696698,6.52924391958036,8.54714897602825,8.79589580509311,6.10389454998381,18.5843193675948,10.1967867185092,13.9068836203785,9.9960692270626,15.0603965369194,13.8345816574767,8.78656196771952,13.8142817201452,14.2598951353889,18.6461687182131,14.7586052004998,14.4389760547462,7.14923172082955,7.56256594931503,9.05510786479281,6.43011105094777,5.32020700926821,4.99432689285798,6.08831376227848,8.22055362609418,5.63212099352905,2.1183207086382,5.29268155331909,4.9465875882444,6.45857706783622,8.68506118965444,7.75920236020387,7.38634048852776,6.70405924248657,4.26478194624172,9.3978984438819,9.49379592630823,8.14855920426731,7.91147519419702,6.56132293060921,7.32090154260872,14.4481665494777,11.7559219951873,11.746997773376,7.63736494412091,11.704431762502,8.53941761932765,6.80433647177348,5.43629569637619,6.76923947613151,6.33862428008657,5.62043498932284,4.18809507174447,3.36998930558661,5.59205381778233,3.38215763210514,9.27002585472668,9.76205093696876,7.19469396872976,6.71631082084202,6.08242051766801,6.21993364822496,7.42164993610516,7.44501345422547,2.65742532908607,2.88030006257865,6.32022241256356,12.9744137785705,14.6876668745703,12.9920822977795,8.77230808770659,9.93406773906325,11.658958603437,10.9290250109187,8.58214824559255,10.05929847846,7.56196388526304,6.33476224808391,7.11967628138438,4.79195298944433,6.57518112484113,12.2092274355736,14.1747893442972,9.40153851638839,5.02292944483695,4.69206188627955,9.34073283763052,11.1471557121114,8.52672576860118,7.34177395402186,0.460325236507177,6.30185064783336,3.95262319390481,4.11049511862385,6.7985450765073,4.05013500139084,4.95353323546643,3.62513927187364,3.10656187051092,7.9916257639816,9.17757208822371,10.4147499510022,11.1829089851415,8.38452650511929,6.80220981265052,5.11167473943715,5.56294654545014,6.09746498224449,5.81203587056734,7.09742039692671,5.09291121742406,5.24392441831341,6.72264100251127,5.51380501973887,5.23923060411381,7.18482820858104,6.55891349576597,7.00546031365621,6.18235464564469,2.40008476669791,7.27650805253284,6.43777712857767,4.94177816549917,5.64656282491984,5.24610568928394,7.68297486065645,4.20911538300549,5.83957689537206,3.36685362994643,7.3553711236988,5.22073756590486,6.13846564754534,6.66228417099654,4.62975866354739,8.74337022782811,6.78401664491684,6.87587372954555,8.60797494309795,4.41182838239031,6.26043156175138 | |||
|short_description=p1@Nle1 | |||
}} |
Latest revision as of 19:36, 25 September 2015
Short description: | p1@Nle1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Nle1_5end |
Coexpression cluster: | MCL_coexpression_mm9:155 |
Association with transcript: | 0bp_to_NM_145431, uc007knt.2_5end |
EntrezGene: | Nle1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 2.54e-12 | 32 |
hematopoietic oligopotent progenitor cell | 2.54e-12 | 32 |
hematopoietic stem cell | 2.54e-12 | 32 |
hematopoietic multipotent progenitor cell | 2.54e-12 | 32 |
connective tissue cell | 1.85e-09 | 46 |
mesenchymal cell | 1.85e-09 | 46 |
hematopoietic lineage restricted progenitor cell | 8.56e-09 | 25 |
T cell | 6.70e-08 | 11 |
pro-T cell | 6.70e-08 | 11 |
lymphoid lineage restricted progenitor cell | 9.47e-08 | 12 |
lymphocyte | 1.01e-07 | 13 |
common lymphoid progenitor | 1.01e-07 | 13 |
motile cell | 1.18e-07 | 54 |
stem cell | 2.96e-07 | 97 |
mature alpha-beta T cell | 6.03e-07 | 9 |
alpha-beta T cell | 6.03e-07 | 9 |
immature T cell | 6.03e-07 | 9 |
mature T cell | 6.03e-07 | 9 |
immature alpha-beta T cell | 6.03e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.85e-09 | 46 |
hemolymphoid system | 6.28e-09 | 48 |
immune system | 6.28e-09 | 48 |
hematopoietic system | 1.00e-08 | 45 |
blood island | 1.00e-08 | 45 |