FFCP PHASE1:Mm9::chr11:77576771..77576841,+: Difference between revisions
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{{FFCP|EntrezGene=360013|HGNC=|UniProt=Q3UIM4|association_with_transcript=0bp_to_ENSMUST00000100795,uc007khf.1_5end|description=CAGE_peak_1_at_Myo18a_5end|id=chr11:77576771..77576841,+|ontology_enrichment_celltype=CL:0002321!3.63e-16!70;CL:0000220!3.63e-16!70;CL:0002319!4.52e-15!43;CL:0000221!2.97e-14!44;CL:0000133!2.97e-14!44;CL:0000055!1.36e-12!50;CL:0000540!3.16e-12!33;CL:0000047!3.16e-12!33;CL:0000031!3.16e-12!33;CL:0000404!3.16e-12!33;CL:0000117!5.97e-11!23;CL:0000337!5.97e-11!23;CL:0000393!1.24e-09!39;CL:0000211!1.24e-09!39|ontology_enrichment_celltype_v019_2=CL:0002321,3.63e-16,70;CL:0002319,4.52e-15,43;CL:0000221,2.97e-14,44;CL:0000133,2.97e-14,44;CL:0000540,3.16e-12,33;CL:0000047,3.16e-12,33;CL:0000031,3.16e-12,33;CL:0000404,3.16e-12,33;CL:0000117,5.97e-11,23;CL:0000337,5.97e-11,23;CL:0000393,1.24e-09,39;CL:0000211,1.24e-09,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.10e-19!75;UBERON:0001016!1.10e-19!75;UBERON:0001017!3.64e-19!73;UBERON:0005743!3.64e-19!73;UBERON:0002020!1.49e-15!34;UBERON:0002791!6.55e-14!29;UBERON:0003528!6.55e-14!29;UBERON:0001893!6.55e-14!29;UBERON:0001049!9.38e-13!52;UBERON:0005068!9.38e-13!52;UBERON:0006241!9.38e-13!52;UBERON:0007135!9.38e-13!52;UBERON:0000955!4.53e-12!50;UBERON:0006238!4.53e-12!50;UBERON:0004121!4.88e-12!102;UBERON:0000924!4.88e-12!102;UBERON:0006601!4.88e-12!102;UBERON:0002616!5.81e-12!49;UBERON:0000956!3.71e-11!21;UBERON:0001869!3.71e-11!21;UBERON:0000203!3.71e-11!21;UBERON:0000025!7.21e-10!114;UBERON:0002619!8.57e-10!17;UBERON:0003080!1.57e-09!40;UBERON:0002780!2.99e-09!39;UBERON:0001890!2.99e-09!39;UBERON:0006240!2.99e-09!39;UBERON:0002346!5.56e-09!71;UBERON:0003075!5.56e-09!71;UBERON:0007284!5.56e-09!71;UBERON:0004111!2.00e-08!122;UBERON:0000064!2.65e-08!99;UBERON:0000033!4.88e-08!63;UBERON:0003056!9.75e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0011216,1.32e-21,194;UBERON:0001016,1.10e-19,75;UBERON:0001017,3.64e-19,73;UBERON:0002020,1.49e-15,34;UBERON:0003528,6.55e-14,29;UBERON:0002791,6.55e-14,29;UBERON:0001893,6.55e-14,29;UBERON:0000073,1.14e-13,54;UBERON:0004121,4.10e-13,95;UBERON:0000924,4.10e-13,95;UBERON:0006601,4.10e-13,95;UBERON:0001049,9.38e-13,52;UBERON:0005068,9.38e-13,52;UBERON:0006241,9.38e-13,52;UBERON:0007135,9.38e-13,52;UBERON:0000956,3.71e-11,21;UBERON:0001869,3.71e-11,21;UBERON:0000203,3.71e-11,21;UBERON:0000955,7.58e-11,47;UBERON:0006238,7.58e-11,47;UBERON:0002616,9.71e-11,46;UBERON:0002346,3.48e-10,64;UBERON:0003075,3.48e-10,64;UBERON:0007284,3.48e-10,64;UBERON:0000025,7.21e-10,114;UBERON:0002619,8.57e-10,17;UBERON:0003080,1.57e-09,40;UBERON:0002780,2.99e-09,39;UBERON:0001890,2.99e-09,39;UBERON:0006240,2.99e-09,39;UBERON:0004111,2.00e-08,122;UBERON:0010371,3.51e-07,73;UBERON:0003056,9.75e-07,49|phase1_expression=13.1322054625931,98.0620895466605,76.8948714568316,85.2949075885261,79.1415253315229,49.3565059420956,47.1897534002962,2.58246646883153,0.985521055061667,0.70219357896598,0.68487187290202,0.797721589953364,4.62241970814255,4.54586092578786,23.3176833270964,17.412872995525,16.0899231969474,2.20823515750766,1.37114433605739,3.81950686618227,26.9587229778891,10.425549876093,10.9703911438353,34.3983709005824,27.7585230091276,57.997428375617,45.6607715928619,46.541786260152,35.7244028577983,34.0240675175907,26.6076612786366,52.7075458971494,46.1298590688428,47.5445043046316,13.2871745085586,9.30914014007557,10.0042984568561,1.25559489221072,2.3440060335714,0,1.17646297606203,4.09827290975067,0.971020706062307,25.4311572310666,25.5469866673177,46.6208750490671,17.9950009200049,97.8932952148205,74.9129883124549,80.8828380149019,46.1955191363696,77.6263847570847,0.167782606057736,6.5282592781021,4.36921938885203,2.57259436035947,6.30373567865265,10.3134418455488,62.3134699447561,56.6020347821075,78.5950940347662,24.7356508410466,25.789549087223,8.09909745553259,9.88866362566974,5.6838409195688,27.2636100571748,33.4269925629752,48.0082904988252,44.0119358961312,42.2753172316278,41.9906947073591,39.0937317484356,53.0385160600751,67.2835206548019,72.6182841421917,53.9567816897005,45.3290050202416,45.7747469103606,63.1735318227629,68.9816832762169,62.5096044668112,43.5525478442154,30.3891809417107,40.4915356608547,37.1232017696821,43.1386192821282,57.2246298683673,23.853750899953,62.724394888632,72.1762576867178,31.8356834483113,35.358509352803,38.8586297979228,59.1296539877379,53.7632264516803,22.3306628009485,21.6446509674133,20.0035223544209,21.9070536196411,14.7885590765515,38.4979432242953,56.0571527354621,21.3320010945999,34.6385665617943,36.7371804938893,35.8922355960496,26.3764762151029,3.88406825470758,30.7275227864187,24.287945747259,16.1366703505435,17.7573932887165,16.2780451796832,19.0493705559842,28.0236498665176,27.1914464507811,16.7735254027098,13.2691582792481,17.9561203441624,16.7839554029899,21.3345111379498,35.4144346314432,32.7914492652933,37.4909605196085,37.5521871156629,4.79260498023681,2.99951365496704,3.81210681219194,40.4434726393021,33.8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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=360013 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=Q3UIM4 | |||
|association_with_transcript=0bp_to_ENSMUST00000100795,uc007khf.1_5end | |||
|cluster_id=chr11:77576771..77576841,+ | |||
|description=CAGE_peak_1_at_Myo18a_5end | |||
|id=chr11:77576771..77576841,+ | |||
|ontology_enrichment_celltype=CL:0002321!3.63e-16!70;CL:0000220!3.63e-16!70;CL:0002319!4.52e-15!43;CL:0000221!2.97e-14!44;CL:0000133!2.97e-14!44;CL:0000055!1.36e-12!50;CL:0000540!3.16e-12!33;CL:0000047!3.16e-12!33;CL:0000031!3.16e-12!33;CL:0000404!3.16e-12!33;CL:0000117!5.97e-11!23;CL:0000337!5.97e-11!23;CL:0000393!1.24e-09!39;CL:0000211!1.24e-09!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,3.63e-16,70;CL:0002319,4.52e-15,43;CL:0000221,2.97e-14,44;CL:0000133,2.97e-14,44;CL:0000540,3.16e-12,33;CL:0000047,3.16e-12,33;CL:0000031,3.16e-12,33;CL:0000404,3.16e-12,33;CL:0000117,5.97e-11,23;CL:0000337,5.97e-11,23;CL:0000393,1.24e-09,39;CL:0000211,1.24e-09,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.10e-19!75;UBERON:0001016!1.10e-19!75;UBERON:0001017!3.64e-19!73;UBERON:0005743!3.64e-19!73;UBERON:0002020!1.49e-15!34;UBERON:0002791!6.55e-14!29;UBERON:0003528!6.55e-14!29;UBERON:0001893!6.55e-14!29;UBERON:0001049!9.38e-13!52;UBERON:0005068!9.38e-13!52;UBERON:0006241!9.38e-13!52;UBERON:0007135!9.38e-13!52;UBERON:0000955!4.53e-12!50;UBERON:0006238!4.53e-12!50;UBERON:0004121!4.88e-12!102;UBERON:0000924!4.88e-12!102;UBERON:0006601!4.88e-12!102;UBERON:0002616!5.81e-12!49;UBERON:0000956!3.71e-11!21;UBERON:0001869!3.71e-11!21;UBERON:0000203!3.71e-11!21;UBERON:0000025!7.21e-10!114;UBERON:0002619!8.57e-10!17;UBERON:0003080!1.57e-09!40;UBERON:0002780!2.99e-09!39;UBERON:0001890!2.99e-09!39;UBERON:0006240!2.99e-09!39;UBERON:0002346!5.56e-09!71;UBERON:0003075!5.56e-09!71;UBERON:0007284!5.56e-09!71;UBERON:0004111!2.00e-08!122;UBERON:0000064!2.65e-08!99;UBERON:0000033!4.88e-08!63;UBERON:0003056!9.75e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011216,1.32e-21,194;UBERON:0001016,1.10e-19,75;UBERON:0001017,3.64e-19,73;UBERON:0002020,1.49e-15,34;UBERON:0003528,6.55e-14,29;UBERON:0002791,6.55e-14,29;UBERON:0001893,6.55e-14,29;UBERON:0000073,1.14e-13,54;UBERON:0004121,4.10e-13,95;UBERON:0000924,4.10e-13,95;UBERON:0006601,4.10e-13,95;UBERON:0001049,9.38e-13,52;UBERON:0005068,9.38e-13,52;UBERON:0006241,9.38e-13,52;UBERON:0007135,9.38e-13,52;UBERON:0000956,3.71e-11,21;UBERON:0001869,3.71e-11,21;UBERON:0000203,3.71e-11,21;UBERON:0000955,7.58e-11,47;UBERON:0006238,7.58e-11,47;UBERON:0002616,9.71e-11,46;UBERON:0002346,3.48e-10,64;UBERON:0003075,3.48e-10,64;UBERON:0007284,3.48e-10,64;UBERON:0000025,7.21e-10,114;UBERON:0002619,8.57e-10,17;UBERON:0003080,1.57e-09,40;UBERON:0002780,2.99e-09,39;UBERON:0001890,2.99e-09,39;UBERON:0006240,2.99e-09,39;UBERON:0004111,2.00e-08,122;UBERON:0010371,3.51e-07,73;UBERON:0003056,9.75e-07,49 | |||
|phase1_expression=13.1322054625931,98.0620895466605,76.8948714568316,85.2949075885261,79.1415253315229,49.3565059420956,47.1897534002962,2.58246646883153,0.985521055061667,0.70219357896598,0.68487187290202,0.797721589953364,4.62241970814255,4.54586092578786,23.3176833270964,17.412872995525,16.0899231969474,2.20823515750766,1.37114433605739,3.81950686618227,26.9587229778891,10.425549876093,10.9703911438353,34.3983709005824,27.7585230091276,57.997428375617,45.6607715928619,46.541786260152,35.7244028577983,34.0240675175907,26.6076612786366,52.7075458971494,46.1298590688428,47.5445043046316,13.2871745085586,9.30914014007557,10.0042984568561,1.25559489221072,2.3440060335714,0,1.17646297606203,4.09827290975067,0.971020706062307,25.4311572310666,25.5469866673177,46.6208750490671,17.9950009200049,97.8932952148205,74.9129883124549,80.8828380149019,46.1955191363696,77.6263847570847,0.167782606057736,6.5282592781021,4.36921938885203,2.57259436035947,6.30373567865265,10.3134418455488,62.3134699447561,56.6020347821075,78.5950940347662,24.7356508410466,25.789549087223,8.09909745553259,9.88866362566974,5.6838409195688,27.2636100571748,33.4269925629752,48.0082904988252,44.0119358961312,42.2753172316278,41.9906947073591,39.0937317484356,53.0385160600751,67.2835206548019,72.6182841421917,53.9567816897005,45.3290050202416,45.7747469103606,63.1735318227629,68.9816832762169,62.5096044668112,43.5525478442154,30.3891809417107,40.4915356608547,37.1232017696821,43.1386192821282,57.2246298683673,23.853750899953,62.724394888632,72.1762576867178,31.8356834483113,35.358509352803,38.8586297979228,59.1296539877379,53.7632264516803,22.3306628009485,21.6446509674133,20.0035223544209,21.9070536196411,14.7885590765515,38.4979432242953,56.0571527354621,21.3320010945999,34.6385665617943,36.7371804938893,35.8922355960496,26.3764762151029,3.88406825470758,30.7275227864187,24.287945747259,16.1366703505435,17.7573932887165,16.2780451796832,19.0493705559842,28.0236498665176,27.1914464507811,16.7735254027098,13.2691582792481,17.9561203441624,16.7839554029899,21.3345111379498,35.4144346314432,32.7914492652933,37.4909605196085,37.5521871156629,4.79260498023681,2.99951365496704,3.81210681219194,40.4434726393021,33.8550446085784,41.9685536056967,44.6728502894151,56.2574006126727,36.362907797923,45.4275536589721,16.4979769437512,15.3020573850414,12.1306924048164,17.4666740385773,13.7927669540466,17.2426578325105,20.1669585381991,16.2761203262572,23.1324097114515,20.2419678050063,21.9262035469765,20.1788629176432,16.1675994699632,16.0740168142646,20.0584281546902,13.5901354105096,18.6291656981151,22.2881386574187,17.0799173218593,16.7188784127534,1.40442637462647,2.31613116403244,2.84163499395593,14.7059298500206,11.0227248191115,13.8647787324981,13.7311946639422,15.3476100762975,14.3468414985262,17.4400458562806,18.7791380979733,18.3321587516456,15.1395061920402,20.0284306176496,23.3478171492064,22.3685980760758,19.1008600303214,22.6808847705028,38.062480690107,33.8556174727846,62.4491499839378,29.8829140329805,10.6644125267617,16.4888037020911,14.0465532841082,18.3532007407242,21.5706702529524,20.5443676201564,44.1312027236396,25.3636390274977,34.9355940232375,27.2570366696377,30.0244694163445,46.7386092500195,30.9077411320813,37.2394180985667,9.86273084956025,20.7932292949706,11.270773567308,22.4016460629846,25.407775818959,33.1742428081207,45.0876509695954,51.8111619408404,42.2326577893298,50.9630286997036,42.3927256734623,24.1925403288336,24.5698743891504,30.1315230595704,28.6032771157789,23.8765388154893,18.5876871800436,29.0573098825319,22.0503908414048,25.2596500133035,30.1913233707445,27.5384301274693,39.0047091393201,51.2735122232637,32.2915344339442,40.0428122731595,31.4080423283228,10.9905018826881,19.3928321966011,27.4987038955805,29.5709712843513,37.8564141818504,40.9435062323944,44.6856053594359,38.3053400178044,38.7563206885356,48.9526139778485,33.5919795167263,41.6170806296808,47.7341893318988,7.53956419696361,9.79030230873677,20.1623351937805,15.1765210467603,40.9404004468869,48.5256382491721,6.88526770582037,11.8661335786055,29.9732808445444,36.701241963884,34.252320239515,47.5547907925579,56.1452658687633,66.2399082045868,37.2425845540903,34.4861912335348,34.3900366813475,30.8468463764935,19.019971417908,12.2865266530406,13.3567306669932,12.3727592229402,46.460798418987,22.3358185262583,23.5812374432506,21.1237689326606,24.2147552162234,27.6691633149535,38.7642439752332,30.173299546633,28.163292892393,26.5470876666085,32.6797686582496,40.2228618667929,10.8940673841212,17.6459872150684,15.3936833701478,18.8616590827801,15.4286003268778,19.7989387538298,18.9231373692439,17.3545020995322,22.0591405579888,27.7500012831604,8.60060752414351,20.281009111802,14.3703339759356,16.5860543552429,19.6964367605175,17.2347944732314,40.2243554549194,43.9457965764908,13.6696704638282,28.8941615148511,23.5197049759534,20.3437933565066,20.5041341581538,18.3022538565218,7.30907248973578,9.6566502103324,7.32459861163446,22.9120948323627,12.4952717464548,1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| |||
|short_description=p1@Myo18a | |||
}} |
Latest revision as of 17:30, 25 September 2015
Short description: | p1@Myo18a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Myo18a_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000100795, uc007khf.1_5end |
EntrezGene: | Myo18a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 3.63e-16 | 70 |
neural cell | 4.52e-15 | 43 |
ectodermal cell | 2.97e-14 | 44 |
neurectodermal cell | 2.97e-14 | 44 |
neuron | 3.16e-12 | 33 |
neuronal stem cell | 3.16e-12 | 33 |
neuroblast | 3.16e-12 | 33 |
electrically signaling cell | 3.16e-12 | 33 |
CNS neuron (sensu Vertebrata) | 5.97e-11 | 23 |
neuroblast (sensu Vertebrata) | 5.97e-11 | 23 |
electrically responsive cell | 1.24e-09 | 39 |
electrically active cell | 1.24e-09 | 39 |
Ontology term | p-value | n |
---|---|---|
organ system subdivision | 1.32e-21 | 194 |
nervous system | 1.10e-19 | 75 |
central nervous system | 3.64e-19 | 73 |
gray matter | 1.49e-15 | 34 |
brain grey matter | 6.55e-14 | 29 |
regional part of telencephalon | 6.55e-14 | 29 |
telencephalon | 6.55e-14 | 29 |
regional part of nervous system | 1.14e-13 | 54 |
ectoderm-derived structure | 4.10e-13 | 95 |
ectoderm | 4.10e-13 | 95 |
presumptive ectoderm | 4.10e-13 | 95 |
neural tube | 9.38e-13 | 52 |
neural rod | 9.38e-13 | 52 |
future spinal cord | 9.38e-13 | 52 |
neural keel | 9.38e-13 | 52 |
cerebral cortex | 3.71e-11 | 21 |
cerebral hemisphere | 3.71e-11 | 21 |
pallium | 3.71e-11 | 21 |
brain | 7.58e-11 | 47 |
future brain | 7.58e-11 | 47 |
regional part of brain | 9.71e-11 | 46 |
neurectoderm | 3.48e-10 | 64 |
neural plate | 3.48e-10 | 64 |
presumptive neural plate | 3.48e-10 | 64 |
tube | 7.21e-10 | 114 |
regional part of cerebral cortex | 8.57e-10 | 17 |
anterior neural tube | 1.57e-09 | 40 |
regional part of forebrain | 2.99e-09 | 39 |
forebrain | 2.99e-09 | 39 |
future forebrain | 2.99e-09 | 39 |
anatomical conduit | 2.00e-08 | 122 |
ecto-epithelium | 3.51e-07 | 73 |
pre-chordal neural plate | 9.75e-07 | 49 |