FFCP PHASE1:Hg19::chr3:11685345..11685432,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9686 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28966 | |||
|TSSclassifier=strong | |||
|UniProt=G5E9M7,Q14135 | |||
|association_with_transcript=0bp_to_ENST00000430365,NM_001128219,uc010hdx.1_5end | |||
|cluster_id=chr3:11685345..11685432,- | |||
|description=CAGE_peak_1_at_VGLL4_5end | |||
|id=chr3:11685345..11685432,- | |||
|ontology_enrichment_celltype=CL:0000222!2.27e-07!119;CL:0000115!7.25e-07!35;CL:0000213!8.38e-07!57;CL:0000215!8.38e-07!57;CL:0002139!9.26e-07!24 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,2.76e-07,121;CL:0002139,9.26e-07,24 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!2.09e-11!79;UBERON:0007798!2.09e-11!79;UBERON:0000055!3.14e-09!69;UBERON:0001981!2.22e-08!60;UBERON:0007500!2.22e-08!60;UBERON:0004537!2.22e-08!60;UBERON:0006965!2.22e-08!60;UBERON:0004535!1.03e-07!110;UBERON:0001009!2.08e-07!113;UBERON:0004872!3.00e-07!84;UBERON:0000025!4.21e-07!194 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002049,3.02e-11,78;UBERON:0007798,3.02e-11,78;UBERON:0000055,4.49e-09,68;UBERON:0007500,3.15e-08,59;UBERON:0001981,3.15e-08,59;UBERON:0004537,3.15e-08,59;UBERON:0006965,3.15e-08,59;UBERON:0004535,1.41e-07,109;UBERON:0001009,2.84e-07,112;UBERON:0004872,4.16e-07,83;UBERON:0000025,7.21e-07,192 | |||
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| |||
|short_description=p1@VGLL4 | |||
}} |
Latest revision as of 18:45, 19 September 2015
Short description: | p1@VGLL4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_VGLL4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000430365, NM_001128219, uc010hdx.1_5end |
EntrezGene: | VGLL4 |
HGNC: | 28966 |
UniProt: | G5E9M7Q14135 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 2.76e-07 | 121 |
endothelial cell of vascular tree | 9.26e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
vasculature | 3.02e-11 | 78 |
vascular system | 3.02e-11 | 78 |
vessel | 4.49e-09 | 68 |
epithelial tube open at both ends | 3.15e-08 | 59 |
blood vessel | 3.15e-08 | 59 |
blood vasculature | 3.15e-08 | 59 |
vascular cord | 3.15e-08 | 59 |
cardiovascular system | 1.41e-07 | 109 |
circulatory system | 2.84e-07 | 112 |
splanchnic layer of lateral plate mesoderm | 4.16e-07 | 83 |
tube | 7.21e-07 | 192 |