FFCP PHASE1:Hg19::chr3:113344781..113344796,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54847 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25967 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=20bp_to_ENST00000498152_5end | |||
|cluster_id=chr3:113344781..113344796,+ | |||
|coexpression_cluster_id=C44 | |||
|description=CAGE_peak_3_at_SIDT1_5end | |||
|id=chr3:113344781..113344796,+ | |||
|ontology_enrichment_celltype=CL:0000037!2.06e-37!172;CL:0000566!2.06e-37!172;CL:0000738!2.27e-35!140;CL:0000988!8.74e-34!182;CL:0002032!2.99e-32!165;CL:0000837!2.99e-32!165;CL:0000557!3.86e-31!71;CL:0002087!1.22e-29!119;CL:0002031!6.06e-29!124;CL:0000763!7.86e-29!112;CL:0000049!7.86e-29!112;CL:0000839!1.79e-28!70;CL:0000766!3.34e-28!76;CL:0002057!6.94e-27!42;CL:0002009!1.48e-26!65;CL:0002194!2.75e-26!63;CL:0000576!2.75e-26!63;CL:0000040!2.75e-26!63;CL:0000559!2.75e-26!63;CL:0000860!2.65e-24!45;CL:0000236!5.76e-12!14;CL:0002393!3.90e-08!9;CL:0002397!3.90e-08!9 | |||
|ontology_enrichment_celltype_v019=CL:0000236;1.64e-28;13!CL:0000945;1.90e-14;24!CL:0000784;5.97e-13;3!CL:0002619;1.84e-11;3!CL:0000766;1.33e-10;69!CL:0000473;1.64e-09;39!CL:0000234;1.64e-09;39!CL:0000576;1.88e-09;48!CL:0000860;4.55e-08;33!CL:0002057;4.55e-08;33!CL:0000097;1.54e-07;5!CL:0000738;1.60e-07;136!CL:0000763;2.84e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,3.47e-29,168;CL:0000988,3.29e-27,177;CL:0000738,1.18e-26,136;CL:0000236,2.54e-26,14;CL:0002032,6.17e-24,161;CL:0000837,6.17e-24,161;CL:0002031,9.19e-22,120;CL:0000766,1.74e-20,72;CL:0000557,3.41e-20,67;CL:0002087,1.77e-19,115;CL:0000763,5.62e-19,108;CL:0000049,5.62e-19,108;CL:0000839,1.69e-18,66;CL:0002194,7.44e-15,59;CL:0000576,7.44e-15,59;CL:0000040,7.44e-15,59;CL:0000559,7.44e-15,59;CL:0000945,1.89e-14,24;CL:0000826,1.89e-14,24;CL:0002009,3.08e-14,61;CL:0000784,5.99e-13,3;CL:0002619,1.62e-11,3;CL:0000473,3.30e-11,48;CL:0000234,3.30e-11,48;CL:0000860,2.06e-09,42;CL:0002057,2.06e-09,42;CL:0000134,8.65e-09,354;CL:0002320,1.95e-08,361;CL:0000097,1.37e-07,5;CL:0002028,1.37e-07,5;CL:0000219,3.35e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;3.89e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.79e-23,98;UBERON:0003061,2.79e-23,98;UBERON:0002193,3.60e-22,108;UBERON:0002405,2.34e-19,93;UBERON:0002371,4.54e-19,76;UBERON:0001474,2.81e-17,82;UBERON:0004765,2.93e-15,90;UBERON:0001434,3.39e-13,100;UBERON:0003081,2.50e-09,203;UBERON:0002384,5.88e-08,371;UBERON:0002204,2.75e-07,167 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.14691421479123,0,4.64448369948228,0,0,0,0,0,2.64240395401362,0,0.401088894940283,1.08505435357926,2.23915474239924,2.26725566213286,1.80302897343931,0.145398238779565,0,0.727752183563449,1.16214518452842,0.411167888021826,0.929119112685311,0.575384784644301,1.7931249457037,0.236482229888585,0.689491361473237,1.29096936716765,1.35426486594342,0.376484679085209,0.818718450173537,0.449446968890169,0,1.60464513538047,0,0,0.598390972864896,0,0,0.56738522469114,0.622822248995575,0.502497330513487,1.5644487552606,1.3031330682307,0,0.736555271975129,0.316462387440884,0.633765858935825,0.425208599930087,0.419317291016752,2.69588714751588,2.55300717830561,1.44653028027372,1.99508920618874,0.99458338599545,0.365328307529268,7.03984977845291,5.46138611262132,4.44754626931777,0.853460445133014,3.2031678962881,10.9202963591352,5.94940385506376,14.3108063180305,9.67662047486062,6.45960908308033,9.93910393125595,0,1.12101712596307,3.95076127162616,0.196709770113833,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383959833463255,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,82.7562466339537,50.3355521486513,68.3481802446399,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738651018262192,0,0.297262324577456,0,0,0,0,0,0,0,0.352193736052904,5.59785911960085,10.3766366460212,2.77733353538036,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43247561282381,4.52031382288914,0,0,0,0,0,0,0,0,0.197030760201927,0.215627574859517,0.385029108839245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.06768026122887,0.862856803274467,0.960548020230999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659006605437454,0,0,0,0,1.01489521846434,0,0.569647187174163,0.476463550915578,0,0,1.62009431171434,0,0,0,0,0.743212700502875,0,0,0,1.1974762285969,0.383010740264733,0,0,0,1.36940807419915,0.156679895773023,0,0,0.321176150207399,1.41259795033733,0,0,0,0,0.333698283423817,0.390776190804081,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0.140669416410513,0,0,0,0.398495976502139,1.10513566212459,0,0,0,0,0,0,0,0.0986434056369336,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221158519862449,0.295547618953547,0.438770794307945,0,0,0.230850775511391,0,0,0,0,0,0,0,0,5.18034846103582,0.498635045700469,0,0,0,0,0.953619473882272,0,0,0,0,0,0,1.83309043480088,0,0,0,0.471807930864739,0.802577647298789,0.468528891450678,0,0,0,0.394584402849391,2.41981432097328,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0.451961481561065,0,0,0.0633107959558787,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55493176133945,0,0,0.279282401272254,0.458320848023367,0,0,0,0.223171457441873,0.268733889946905,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0.674921674654501,0,0.182248669974074,0,0.0788057072991982,0.209818352539992,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.13223260174269,0,0,0.320362237703084,0.157204305099666,0.414239055347196,0,0,0.121792598380896,0,0.544017803369474,0,0,0.327872630709804,0,0,0,0,0,0.332787154610557,0.496771223531068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265729680626726,0.490696182767533,0,0,0,0,0.213383459388282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0.202612753855184,0,0.206686796501184,0.380494861163441,0,0,0.496211178389294,0,0,0,0,0,0,0.177404740325278,0,0,0.135939465953663,0.328863867814245,0,0,0.235479278551542,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29485767437579,0,1.1598144313382,0.485710993059139,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0.196308467114945,0,0,0,2.06764619555678,1.28915775947154,0.0999411559249289,0,0,0,0.730336388246517,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.213233981900981,0.23806443146374,0.516711278688049,0.372448285775147,0,0,0,0.217716747896961,0.342233301085281,1.41439311330634,0.0717222053926763,0.332660356546013,0,0,0,0,0,0.244482888365733,0.406896178315738,0,1.40891655513718,0 | |||
|short_description=p3@SIDT1 | |||
}} |
Latest revision as of 15:55, 19 September 2015
Short description: | p3@SIDT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SIDT1_5end |
Coexpression cluster: | C44_Dendritic_CD19_CD133_granulocyte_acute_thymus_immature |
Association with transcript: | 20bp_to_ENST00000498152_5end |
EntrezGene: | SIDT1 |
HGNC: | 25967 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.79e-23 | 98 |
blood island | 2.79e-23 | 98 |
hemolymphoid system | 3.60e-22 | 108 |
immune system | 2.34e-19 | 93 |
bone marrow | 4.54e-19 | 76 |
bone element | 2.81e-17 | 82 |
skeletal element | 2.93e-15 | 90 |
skeletal system | 3.39e-13 | 100 |
lateral plate mesoderm | 2.50e-09 | 203 |
connective tissue | 5.88e-08 | 371 |
musculoskeletal system | 2.75e-07 | 167 |