FFCP PHASE1:Hg19::chr3:112521387..112521398,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-44bp_to_ENST00000519700_5end | |||
|cluster_id=chr3:112521387..112521398,+ | |||
|coexpression_cluster_id=C542 | |||
|description=CAGE_peak_2_at_ENST00000519700_5end | |||
|id=chr3:112521387..112521398,+ | |||
|ontology_enrichment_celltype=CL:0002274!2.74e-15!5;CL:0000457!2.74e-15!5;CL:0002191!2.74e-15!5;CL:0000097!2.74e-15!5;CL:0000831!2.74e-15!5;CL:0002028!2.74e-15!5;CL:0000163!1.01e-08!9 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;3.30e-16;29 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1749;3.17e-15;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,3.41e-15,14 | |||
|ontology_enrichment_uberon=UBERON:0003127!8.35e-18!2;UBERON:0000341!3.38e-17!2;UBERON:0002171!1.21e-09!1;UBERON:0006518!1.21e-09!1;UBERON:0008949!1.21e-09!1;UBERON:0000101!1.21e-09!1;UBERON:0002167!1.21e-09!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0003127;2.56e-98;2!UBERON:0003126;4.21e-29;7!UBERON:0001005;4.21e-29;7!UBERON:0007196;3.15e-14;15!UBERON:0001558;3.15e-14;15!UBERON:0005178;5.40e-12;34!UBERON:0000072;5.40e-12;37!UBERON:0002224;5.40e-12;34!UBERON:0005181;1.13e-11;35!UBERON:0000065;2.55e-07;44!UBERON:0001004;7.78e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003127,1.55e-98,2;UBERON:0003126,3.65e-29,7;UBERON:0001005,3.65e-29,7;UBERON:0007196,2.94e-14,15;UBERON:0001558,2.94e-14,15;UBERON:0005178,5.72e-14,34;UBERON:0002224,5.72e-14,34;UBERON:0005181,1.35e-13,35;UBERON:0008947,1.34e-12,38;UBERON:0003258,1.34e-12,38;UBERON:0000072,2.31e-10,47;UBERON:0000915,1.89e-09,52;UBERON:0000065,3.93e-09,54;UBERON:0001004,6.92e-07,74 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264145302039678,0.207328115540772,0.288239906833923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261177619741208,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0,0,0,0,0,0,0,0.106787412567695,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.53517209677539,0,1.28386186702669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0.23806443146374,0,0,0,0,0,0,0,0,1.79305513481691,1.33064142618405,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@ENST00000519700 | |||
}} |
Latest revision as of 14:22, 29 July 2015
Short description: | p2@ENST00000519700 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000519700_5end |
Coexpression cluster: | C542_squamous_colon_pharyngeal_ductal_renal_gall_peripheral |
Association with transcript: | -44bp_to_ENST00000519700_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
open tracheal system trachea | 1.55e-98 | 2 |
trachea | 3.65e-29 | 7 |
respiratory airway | 3.65e-29 | 7 |
tracheobronchial tree | 2.94e-14 | 15 |
lower respiratory tract | 2.94e-14 | 15 |
thoracic cavity element | 5.72e-14 | 34 |
thoracic cavity | 5.72e-14 | 34 |
thoracic segment organ | 1.35e-13 | 35 |
respiratory primordium | 1.34e-12 | 38 |
endoderm of foregut | 1.34e-12 | 38 |
segment of respiratory tract | 2.31e-10 | 47 |
thoracic segment of trunk | 1.89e-09 | 52 |
respiratory tract | 3.93e-09 | 54 |
respiratory system | 6.92e-07 | 74 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 3.41e-15 | 14 |