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FFCP PHASE1:Mm9::chr11:70053209..70053214,-: Difference between revisions

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{{FFCP|EntrezGene=52898|HGNC=|MCL_coexpression_id=1087|UniProt=|association_with_transcript=67bp_to_ENSMUST00000125752_5end|description=CAGE_peak_3_at_Rnasek_5end|id=chr11:70053209..70053214,-|ontology_enrichment_celltype=CL:0000723!7.93e-08!91;CL:0000048!7.93e-08!91;CL:0000055!9.28e-08!50;CL:0000034!2.62e-07!97;CL:0000548!3.95e-07!115;CL:0000004!3.95e-07!115;CL:0000255!3.95e-07!115;CL:0002371!4.69e-07!118|ontology_enrichment_celltype_v019_2=CL:0000723,3.46e-12,91;CL:0000048,3.46e-12,91;CL:0000034,1.14e-10,97;CL:0002321,1.48e-08,70;CL:0000393,1.30e-07,39;CL:0000211,1.30e-07,39;CL:0000219,1.98e-07,54;CL:0002319,2.20e-07,43;CL:0000117,2.98e-07,23;CL:0000337,2.98e-07,23;CL:0000221,4.42e-07,44;CL:0000133,4.42e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.38e-11!75;UBERON:0001016!1.38e-11!75;UBERON:0001017!1.99e-11!73;UBERON:0005743!1.99e-11!73;UBERON:0001049!9.18e-09!52;UBERON:0005068!9.18e-09!52;UBERON:0006241!9.18e-09!52;UBERON:0007135!9.18e-09!52;UBERON:0004121!1.14e-08!102;UBERON:0000924!1.14e-08!102;UBERON:0006601!1.14e-08!102;UBERON:0000955!1.46e-08!50;UBERON:0006238!1.46e-08!50;UBERON:0002616!1.73e-08!49;UBERON:0002020!3.89e-08!34;UBERON:0002021!4.86e-07!10;UBERON:0000411!4.86e-07!10;UBERON:0001950!4.86e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0002021,8.92e-12,10;UBERON:0000411,8.92e-12,10;UBERON:0001950,8.92e-12,10;UBERON:0002020,5.30e-11,34;UBERON:0001016,5.56e-11,75;UBERON:0001017,8.35e-11,73;UBERON:0000073,2.43e-10,54;UBERON:0004121,2.17e-08,95;UBERON:0000924,2.17e-08,95;UBERON:0006601,2.17e-08,95;UBERON:0003528,2.36e-08,29;UBERON:0002791,2.36e-08,29;UBERON:0001893,2.36e-08,29;UBERON:0002619,2.43e-08,17;UBERON:0001049,4.95e-08,52;UBERON:0005068,4.95e-08,52;UBERON:0006241,4.95e-08,52;UBERON:0007135,4.95e-08,52|phase1_expression=0.160148847104794,0.348975407639361,0,0.30246421130683,0,0,0.934450562382103,0.645616617207881,0,1.17032263160997,0.171217968225505,0.239316476986009,0.342401459862411,0.437102012094987,0,0,0.699561878128147,0.473193248037357,0.137114433605739,0.42438965179803,0.935476191661768,0.397163804803541,0,0.639969691173627,0.68822784320151,0,0.86152399231815,0.215471232685889,1.52018735565099,0.504060259519861,0.221730510655305,1.27006134691926,1.23012957516914,0,0.288851619751275,0.498703936075477,0,1.25559489221072,0,0.523523743973798,0,1.36609096991689,1.45653105909346,1.1330713617802,1.82478476195126,1.10128051297009,0.782391344348039,1.09012578190223,1.09843091367236,2.72201858703997,0.699932108126813,1.43752564364972,0.671130424230945,1.45072428402269,1.68046899571232,1.02903774414379,2.0057340795713,2.57836046138721,1.01158230429799,1.5869729378161,2.53532561402472,1.0165335962074,1.77858959222228,4.94944844504769,16.8107281636386,9.2362414942993,5.69240209984969,2.30530983192933,0.414758449233911,0.540023753326763,0,1.71390590642282,2.20868540951614,0.244981598429908,0.383381884072945,0.919218786610021,4.40463523997555,2.042997409363,1.68967186581868,0.527545150920775,1.18933936683133,0,4.74611098302348,6.19038871034848,2.29197371665215,2.06240009831567,2.84743361598206,0.559198337475902,1.13589289999776,0.377857800533928,0.289864488701678,0,2.719885334831,2.15881276655127,1.29955283489534,0.896053774194671,1.40444420131752,2.04516387093669,1.29893002301434,1.7666978725517,0.14084341977668,0,0,0,0.865964164044856,1.01343946190039,1.01104889002957,0.68510327831436,0,0.742210695324124,0,1.21786191324856,0.691846491768175,1.05505848386836,0.23517741427141,1.25666591329675,0.741584903203122,0,1.76922110389975,0,0,0,0,1.46390398505774,0.628340120440365,0.255457055208591,0.359445373517761,1.19980546198682,0,0.599162557619291,1.37250180845588,0.251308704225729,0.695297280769106,0.511430914660661,2.0778804455956,0.648965052271031,0.101839363850316,0.497627882440372,1.0108910337347,1.05220927943237,0.130120442962704,0,0.360124259610698,0,0.340182495756639,0.12811372028485,0.187403449119458,0.517406741478031,0.215567992932842,0,0.351902248327898,0.43839146485515,0.278047249225598,0,0,0,0.702213187313235,0.51469581422943,0.852490498186778,0.414251545071004,0,0.180062061461015,0.23674473558521,0.196764231747404,0.462801338662135,0.232533944750408,0.268273401399619,0.116765342367169,0.329119699826961,0.164167464079095,0.243206428637567,0.146199987425332,0.439100230582101,0.402619256281115,0.630869845692382,0.411618449517138,0,0.528901133327089,0.213288250535234,0.232236671860439,0,0.201683524623343,0.444756087689741,0.570676878337677,0.949058123089023,0.823494773620054,0.502670417600539,0.795825888164603,0.58489226135736,0.898819408654221,1.29682829924817,0.199141273254367,0.758671603812327,0.114248512609729,0,0.203651327845314,0.193952487167626,0.561086559122548,0.126473074248515,0.295220295959204,0.941992367048249,0.370191491765402,0.889357881261447,0,0,0.899448449539415,0.202860121388503,0.241177159752417,0.25462585178142,0,0.162135226775035,1.37280706594041,8.62609239164127,0,0.312037673114561,0.757736633841335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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=52898
|HGNC=
|MCL_coexpression_id=1087
|TSSclassifier=NA
|UniProt=
|association_with_transcript=67bp_to_ENSMUST00000125752_5end
|cluster_id=chr11:70053209..70053214,-
|description=CAGE_peak_3_at_Rnasek_5end
|id=chr11:70053209..70053214,-
|ontology_enrichment_celltype=CL:0000723!7.93e-08!91;CL:0000048!7.93e-08!91;CL:0000055!9.28e-08!50;CL:0000034!2.62e-07!97;CL:0000548!3.95e-07!115;CL:0000004!3.95e-07!115;CL:0000255!3.95e-07!115;CL:0002371!4.69e-07!118
|ontology_enrichment_celltype_v019_2=CL:0000723,3.46e-12,91;CL:0000048,3.46e-12,91;CL:0000034,1.14e-10,97;CL:0002321,1.48e-08,70;CL:0000393,1.30e-07,39;CL:0000211,1.30e-07,39;CL:0000219,1.98e-07,54;CL:0002319,2.20e-07,43;CL:0000117,2.98e-07,23;CL:0000337,2.98e-07,23;CL:0000221,4.42e-07,44;CL:0000133,4.42e-07,44
|ontology_enrichment_disease=
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|ontology_enrichment_uberon_v019_2=UBERON:0002021,8.92e-12,10;UBERON:0000411,8.92e-12,10;UBERON:0001950,8.92e-12,10;UBERON:0002020,5.30e-11,34;UBERON:0001016,5.56e-11,75;UBERON:0001017,8.35e-11,73;UBERON:0000073,2.43e-10,54;UBERON:0004121,2.17e-08,95;UBERON:0000924,2.17e-08,95;UBERON:0006601,2.17e-08,95;UBERON:0003528,2.36e-08,29;UBERON:0002791,2.36e-08,29;UBERON:0001893,2.36e-08,29;UBERON:0002619,2.43e-08,17;UBERON:0001049,4.95e-08,52;UBERON:0005068,4.95e-08,52;UBERON:0006241,4.95e-08,52;UBERON:0007135,4.95e-08,52
|phase1_expression=0.160148847104794,0.348975407639361,0,0.30246421130683,0,0,0.934450562382103,0.645616617207881,0,1.17032263160997,0.171217968225505,0.239316476986009,0.342401459862411,0.437102012094987,0,0,0.699561878128147,0.473193248037357,0.137114433605739,0.42438965179803,0.935476191661768,0.397163804803541,0,0.639969691173627,0.68822784320151,0,0.86152399231815,0.215471232685889,1.52018735565099,0.504060259519861,0.221730510655305,1.27006134691926,1.23012957516914,0,0.288851619751275,0.498703936075477,0,1.25559489221072,0,0.523523743973798,0,1.36609096991689,1.45653105909346,1.1330713617802,1.82478476195126,1.10128051297009,0.782391344348039,1.09012578190223,1.09843091367236,2.72201858703997,0.699932108126813,1.43752564364972,0.671130424230945,1.45072428402269,1.68046899571232,1.02903774414379,2.0057340795713,2.57836046138721,1.01158230429799,1.5869729378161,2.53532561402472,1.0165335962074,1.77858959222228,4.94944844504769,16.8107281636386,9.2362414942993,5.69240209984969,2.30530983192933,0.414758449233911,0.540023753326763,0,1.71390590642282,2.20868540951614,0.244981598429908,0.383381884072945,0.919218786610021,4.40463523997555,2.042997409363,1.68967186581868,0.527545150920775,1.18933936683133,0,4.74611098302348,6.19038871034848,2.29197371665215,2.06240009831567,2.84743361598206,0.559198337475902,1.13589289999776,0.377857800533928,0.289864488701678,0,2.719885334831,2.15881276655127,1.29955283489534,0.896053774194671,1.40444420131752,2.04516387093669,1.29893002301434,1.7666978725517,0.14084341977668,0,0,0,0.865964164044856,1.01343946190039,1.01104889002957,0.68510327831436,0,0.742210695324124,0,1.21786191324856,0.691846491768175,1.05505848386836,0.23517741427141,1.25666591329675,0.741584903203122,0,1.76922110389975,0,0,0,0,1.46390398505774,0.628340120440365,0.255457055208591,0.359445373517761,1.19980546198682,0,0.599162557619291,1.37250180845588,0.251308704225729,0.695297280769106,0.511430914660661,2.0778804455956,0.648965052271031,0.101839363850316,0.497627882440372,1.0108910337347,1.05220927943237,0.130120442962704,0,0.360124259610698,0,0.340182495756639,0.12811372028485,0.187403449119458,0.517406741478031,0.215567992932842,0,0.351902248327898,0.43839146485515,0.278047249225598,0,0,0,0.702213187313235,0.51469581422943,0.852490498186778,0.414251545071004,0,0.180062061461015,0.23674473558521,0.196764231747404,0.462801338662135,0.232533944750408,0.268273401399619,0.116765342367169,0.329119699826961,0.164167464079095,0.243206428637567,0.146199987425332,0.439100230582101,0.402619256281115,0.630869845692382,0.411618449517138,0,0.528901133327089,0.213288250535234,0.232236671860439,0,0.201683524623343,0.444756087689741,0.570676878337677,0.949058123089023,0.823494773620054,0.502670417600539,0.795825888164603,0.58489226135736,0.898819408654221,1.29682829924817,0.199141273254367,0.758671603812327,0.114248512609729,0,0.203651327845314,0.193952487167626,0.561086559122548,0.126473074248515,0.295220295959204,0.941992367048249,0.370191491765402,0.889357881261447,0,0,0.899448449539415,0.202860121388503,0.241177159752417,0.25462585178142,0,0.162135226775035,1.37280706594041,8.62609239164127,0,0.312037673114561,0.757736633841335,0.358794827043824,1.4473305640901,0,0,0,0.339490171550376,0.469380496577004,0.167506257441816,0.952174563544055,0.195133647857799,0.315270288212382,0.44292937929755,0.478364305972461,0.163863314715738,0.345369963731791,0.578596234326046,10.5553898757491,2.71952841909355,0.491764273019036,1.10374698521893,0.80275294993896,0.586058432961016,0.819674726883377,1.00988370881749,0.631016438832513,0.390438744296638,0.430846795465598,0,0,0.849229592366497,0.809621403349789,1.16902343164525,0.395287777946524,0.642642632843614,0.567760340833074,0.178065603667255,0.162886959353576,0.164970122972535,0,0.485561272309963,0,0.754420319023592,1.18120757152309,1.22974059177571,0,0,0.356497378384721,0.948110273807448,2.10837217149998,0,0,0,0.388076051348264,0.643011105094777,0.532020700926821,0.713475270408282,0.987294123612726,1.522324745573,0.938686832254841,1.27099242518292,0.882113592219848,0.49465875882444,0,0.180938774784468,0.358117032009409,0,0.291480836629851,0.370850604021019,0.341741761595705,0.412773735926445,0.185194527369712,0.565105371014073,0.546776910884101,0.457556346413045,0,0.839708713941948,0,0.954670618015114,0.474503990371703,0.203319467126849,0.216010681643603,0,0.218362563746178,0,0.495920734352016,0,0.259229946583586,4.34937519160848,0,0.149516546043979,0.165458490457098,0.194451188344048,0.129159823477731,0.506868376472335,0.352071715937262,0.13020438484395,0.314578033277133,0,0.576060012515731,0,0.202725215290164,0.205421914329655,0,0.537080087002444,0.198681354781265,0.120195449519969,0.443068581523732,0.403865799792591,0.304827226619999,0.201652370273681,0.194915761479505,0.384847366561318,0.701261413089414,0.453460767230423,0.443971906748129,0.538283139656854,0.839423081820392,0.579568782096571,0.563047426353546,0.549454872801795,0.214368379079066,1.00314420807073,1.6942555278512,7.36520378411483,2.29158205375759,1.54667864109319,4.11049511862385,6.0431511791176,1.35004500046361,2.70192721934532,3.62513927187364,3.10656187051092,0.103787347584177,0,0.341467211508268,0.243106717068294,0,0,0.44449345560323,0.206035057238894,0,0.758091635291392,0.50695859978048,0.943131706930381,0.468207537349412,0.320125762024346,0.17230640686684,0,0.115884325944855,0.192909220463705,0.412085900803307,0.735994600671987,0.685738504770831,0.177475806159338,0,0.726732083161643,0.282328141245992,0.423073039458382,0.365855945745545,0.263069711437843,0.135804113845862,0.561142271657738,0.355905054372522,0.0985044823755635,0,0.309873682371932,0.578719832943424,0.999242311751784,0.233931608445408,0.214871054048298,0.57386499620653,0,0.463735671240843
|short_description=p3@Rnasek
}}

Latest revision as of 14:26, 25 September 2015

Short description:p3@Rnasek
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Rnasek_5end
Coexpression cluster:MCL_coexpression_mm9:1087
Association with transcript: 67bp_to_ENSMUST00000125752_5end
EntrezGene:Rnasek
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Rnasek

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.93
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.65
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.24
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.34
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.44
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.47
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.94
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.40
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.69
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B91.52
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.27
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.26
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41.46
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.82
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.10
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.09
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.10
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.72
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.70
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.67
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I91.45
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.68
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.03
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.01
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.58
Mouse Granule cells, donor1.CNhs12131.11713-123C31.01
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C72.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C74.95
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E716.81
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D29.24
Mouse Microglia, donor1.CNhs12629.11718-123C85.69
Mouse Microglia, donor2.CNhs12634.11736-123E82.31
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.41
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.54
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.21
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.38
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.04
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.69
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.53
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.19
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E44.75
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E56.19
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.29
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.06
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.85
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.56
Mouse Schwann, donor1.CNhs12507.11728-123D91.14
Mouse Schwann, donor2.CNhs12573.11746-123F90.38
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.72
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.16
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.90
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.40
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.05
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.30
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.77
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.87
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.01
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.69
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.74
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F51.06
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I31.26
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.46
cerebellum, neonate N30.CNhs11135.1395-42I20.63
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.36
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.60
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F10.25
cortex, adult.CNhs10473.12-14D50.70
cortex, neonate N30.CNhs11107.1392-42F20.51
diencephalon, adult.CNhs10482.20-12F22.08
diencephalon, neonate N30.CNhs11201.1388-42B20.65
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.50
epididymis, adult.CNhs10490.58-23B21.01
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.34
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.19
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.51
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.85
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.24
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E80.63
hippocampus, neonate N00.CNhs11228.627-43G10.41
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E90.82
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E31.30
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.76
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.56
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.94
kidney, neonate N30.CNhs11203.1385-42H10.37
liver, adult pregnant day01.CNhs10466.508-5B20.89
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.90
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G21.37
liver, neonate N06.CNhs11101.684-20A88.63
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.76
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D11.45
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.95
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.58
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A110.56
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.72
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H21.10
medulla oblongata, adult.CNhs10477.17-12C20.80
medulla oblongata, neonate N30.CNhs11200.1396-42A30.59
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.82
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.01
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I70.57
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.75
pancreas, embryo E17.CNhs10599.1558-45G31.18
pancreas, embryo E18.CNhs10580.1535-43I71.23
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F50.99
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I70.94
placenta, adult pregnant day17.CNhs10464.577-18G31.27
prostate, adult.CNhs10470.859-1F80.88
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C90.37
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.57
spleen, neonate N20.CNhs11112.824-19H10.55
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.84
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.50
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C14.35
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.54
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.44
thymus, neonate N06.CNhs11197.681-26C40.40
thymus, neonate N07.CNhs11211.713-19D30.30
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.38
thymus, neonate N30.CNhs11132.1393-42G20.70
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.54
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.84
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A27.37
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.29
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.55
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.11
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A56.04
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.70
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.63
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.11
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.42
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.10
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
somatic stem cell3.46e-1291
multi fate stem cell3.46e-1291
stem cell1.14e-1097
embryonic cell1.48e-0870
electrically responsive cell1.30e-0739
electrically active cell1.30e-0739
motile cell1.98e-0754
neural cell2.20e-0743
CNS neuron (sensu Vertebrata)2.98e-0723
neuroblast (sensu Vertebrata)2.98e-0723
ectodermal cell4.42e-0744
neurectodermal cell4.42e-0744

Uber anatomy
Ontology termp-valuen
occipital lobe8.92e-1210
visual cortex8.92e-1210
neocortex8.92e-1210
gray matter5.30e-1134
nervous system5.56e-1175
central nervous system8.35e-1173
regional part of nervous system2.43e-1054
ectoderm-derived structure2.17e-0895
ectoderm2.17e-0895
presumptive ectoderm2.17e-0895
brain grey matter2.36e-0829
regional part of telencephalon2.36e-0829
telencephalon2.36e-0829
regional part of cerebral cortex2.43e-0817
neural tube4.95e-0852
neural rod4.95e-0852
future spinal cord4.95e-0852
neural keel4.95e-0852
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