FFCP PHASE1:Hg19::chr9:35489936..35489947,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr9:35489936..35489947,+
|short_description=p19@RUSC2
|description=CAGE_peak_19_at_RUSC2_5end
|association_with_transcript=-59bp_to_NM_014806,uc003zww.2,uc010m...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9853 | |EntrezGene=9853 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23625 | |HGNC=23625 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N2Y8 | |UniProt=Q8N2Y8 | ||
|association_with_transcript=-59bp_to_NM_014806,uc003zww.2,uc010mkq.2_5end | |||
|cluster_id=chr9:35489936..35489947,+ | |||
|description=CAGE_peak_19_at_RUSC2_5end | |||
|id=chr9:35489936..35489947,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.36e-07!42;CL:0000860!3.40e-07!45 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.07e-14;33!CL:0002057;4.07e-14;33!CL:0000473;1.58e-09;39!CL:0000234;1.58e-09;39!CL:0000576;9.28e-08;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.23e-11,42;CL:0002057,1.23e-11,42;CL:0000473,4.71e-10,48;CL:0000234,4.71e-10,48;CL:0002194,7.80e-08,59;CL:0000576,7.80e-08,59;CL:0000040,7.80e-08,59;CL:0000559,7.80e-08,59;CL:0002009,1.51e-07,61;CL:0000839,6.60e-07,66;CL:0000557,8.63e-07,67 | |||
|ontology_enrichment_development_v019=CL:0002057;9.53e-10;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001893!4.38e-11!34;UBERON:0002619!1.25e-10!22;UBERON:0002791!2.03e-10!33;UBERON:0001869!2.90e-10!32;UBERON:0002020!1.07e-09!34;UBERON:0003528!1.07e-09!34;UBERON:0001049!1.61e-09!57;UBERON:0005068!1.61e-09!57;UBERON:0006241!1.61e-09!57;UBERON:0007135!1.61e-09!57;UBERON:0001950!1.69e-09!20;UBERON:0000955!2.25e-09!69;UBERON:0006238!2.25e-09!69;UBERON:0000956!3.21e-09!25;UBERON:0000203!3.21e-09!25;UBERON:0002780!3.30e-09!41;UBERON:0001890!3.30e-09!41;UBERON:0006240!3.30e-09!41;UBERON:0000073!4.06e-09!94;UBERON:0001016!4.06e-09!94;UBERON:0001017!7.90e-09!82;UBERON:0005743!8.63e-09!86;UBERON:0003080!9.59e-09!42;UBERON:0007023!1.20e-08!115;UBERON:0000062!1.59e-08!511;UBERON:0002616!3.89e-08!59;UBERON:0003075!5.91e-07!86;UBERON:0007284!5.91e-07!86;UBERON:0000467!6.20e-07!625;UBERON:0000480!7.96e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;6.26e-17;22!UBERON:0000956;6.81e-15;25!UBERON:0000203;6.81e-15;25!UBERON:0001950;8.56e-14;20!UBERON:0001869;7.06e-12;32!UBERON:0002791;2.83e-11;32!UBERON:0001893;2.75e-10;34!UBERON:0003528;9.71e-10;34!UBERON:0002020;9.71e-10;34!UBERON:0002581;1.15e-09;1!UBERON:0002780;1.77e-08;41!UBERON:0001890;1.77e-08;41!UBERON:0002021;1.40e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,5.71e-17,22;UBERON:0000956,6.28e-15,25;UBERON:0000203,6.28e-15,25;UBERON:0001950,9.21e-14,20;UBERON:0002791,1.32e-11,32;UBERON:0001869,1.32e-11,32;UBERON:0003528,6.73e-11,34;UBERON:0002020,6.73e-11,34;UBERON:0001893,6.73e-11,34;UBERON:0002581,2.08e-09,1;UBERON:0002780,5.91e-09,41;UBERON:0001890,5.91e-09,41;UBERON:0003080,5.91e-09,41;UBERON:0006240,5.91e-09,41;UBERON:0002021,1.04e-07,5;UBERON:0001017,7.76e-07,81;UBERON:0000073,8.57e-07,53;UBERON:0002616,8.57e-07,53 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0.123766352960047,0,0,0,0,0.487932798790507,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0.154816123316076,0,0.30120591877825,0.369754010166788,0,0,0,0,0.200544447470142,0.217010870715852,0.223915474239924,0.32389366601898,0.515151135268373,0.145398238779565,0.377875943688809,0.485168122375632,1.85943229524548,1.23350366406548,1.23882548358041,0.28769239232215,0.512321413058201,0.709446689665756,0,0,0,0.376484679085209,1.36453075028923,0.674170453335254,0.306083892370903,0,1.27867425159808,0.329851300186716,0.199463657621632,0,0,0.56738522469114,0,0.75374599577023,1.0429658368404,2.17188844705117,0.605399502633369,1.10483290796269,0.632924774881769,0,0.212604299965044,0,0.112328631146495,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0,0,0,0.0945348171640679,0,0.175669571386252,1.0478326039817,0,0,0.324547393654683,0.174129737299267,0.398873881556595,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0.367663080345869,0,0.0892997282840798,0,0.112611480483322,0,0.949265659568129,0,0,0,0,0,0.12663051166458,0.264818361626438,0.860509862246441,0.709336764396714,0,0,0.24666754841716,0.311211035399766,0,0.163461903113459,0,0.576175924479999,0.234321431833797,0,0,0,0.117434498643765,0,0.140450806702248,0,0,0.206651562351531,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0.300091096084402,0,0.772921620136887,0.18611685633159,0.337552664482532,0.0974370051611986,0.504867548488229,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721879481669586,0.354920400119532,0,0,0.220587945464788,0.217879444092406,0,0.134831308160164,0.392442930250692,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0.109750285408626,1.1240175325762,0.100528972411631,0.0925884451585296,0,0,0,0.115930404975077,0.234817388471643,0.144366447761074,0,0.190254152234598,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0.792435906119034,0,0.432359860250884,0.12624243342638,0.63497894292169,0.763976851116555,0,0,0.102827492703324,0,0.285826432630578,0.112131084345361,0.43596006883328,0.1466765716419,0.646358578788889,0,0,0.26593811658487,0,0.257207374262142,0,0,0,0,0,0.325736184293735,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,1.27587750330633,0,0,0,0.12269149171914,0,0,0.415941723061614,0.178428988797162,0.157702415033935,0.35142424497814,0.300946099727719,0,0,0,0,0.173767228936166,0,0.343143423810856,0,0,0,0,0,0,0.248107807818777,1.38115775959256,0.280660094433074,0.128139149255701,0.511707249066704,0.160853921143607,0,0.308419387605311,0.177561725313127,0.246381468041427,0,0,0,0.200506470303285,0.184161977871793,0.114814448164607,0.182091168006717,0.131124414959424,0.451199612907412,0.15403067420883,0,0,0.105551628892876,1.13733384070897,0,0.215915916102139,0,0,0,0.254876273045038,0.831076008928724,0,0,0,0,0,0.325378394664303,0,0.0915694648183434,0.165018999841176,0,0.650060246036521,0,0.193341436584244,0,0,0,0.107420244868274,0,0.0852266274161009,0.178064071293475,0,0.384380134730212,0,0,0,0.62962469366128,0.6970372701606,0,0,0,0,0.143124886741991,0,0,0,0.511795582622668,0,0,0,0.179872457583315,0,0,0.606547444719948,0,0,0,0,0,0,0,0,0.551365343546124,0.66343897524122,0.438450885253763,0,0,0,0,0,0.143411352204052,0.196498082026242,0,0.354761064070598,0,0,0.379473173765715,0,0.192444225451024,0,0,0,0,0,0.443430153536676,0.689170200620878,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0.199579371432817,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0.281338832821026,0.111308705022906,0,0,0.597743964753209,0.276283915531148,0,0.102268682502155,0,0.311039587661807,0,0,0,0.690503839458535,0,0,0.969332746095218,0.556608588971108,1.99613798001194,0,0,0,0,0,0.236387681767936,0,0,0,0,0.241192877250816,0,0.221158519862449,0.591095237907095,0.438770794307945,0.21787692703798,0,0,0.341826167541004,0,0.0897576444097721,0.108647371922008,0,0.183195186803725,0,0,0,0,0,0,0.167821586975843,0.189753732724185,0,0.421996129056054,0,0,0,0,0.265372693510018,0,0,0,0,0.202203398942031,0,0,0,0,0,0,1.20990716048664,0.30607276163049,0.505492637027904,0.150323419414493,0.103688191397247,0,0,0,0,0,0.554698692052555,0,0,0,0.17472666824203,0,0.0967563312890851,0.146178634172371,0,0.193978032976839,0.0882561266915003,0,0,0,1.01297273529406,0,0,0.426905989478705,0,0,0,0,0.288109595976299,0.124252535565433,0,0.135904206073614,0.313808538937,0.101998217636322,0,0,0.273810757783986,0,0,0,0,0,0,0.199679000498991,0,0.223171457441873,0.335917362433631,0,0,0.0787831823072236,0,0,0.0984274815147488,0,1.59045937961861,0.272406812223151,0,0,0,0,0,0.789744236554321,0.335434687599266,0.0788057072991982,0.0524545881349981,0.211200673038813,0,0,0.714695326373367,0,0.5085370753095,0,0,0.326587360109409,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0.496166021811951,0,0,0,0.544017803369474,0.2506898940227,0.306345576763462,0.327872630709804,0,0,0.4881050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| ||
|short_description=p19@RUSC2 | |||
}} | }} |
Latest revision as of 07:25, 17 September 2015
Short description: | p19@RUSC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_RUSC2_5end |
Coexpression cluster: | NA |
Association with transcript: | -59bp_to_NM_014806, uc003zww.2, uc010mkq.2_5end |
EntrezGene: | RUSC2 |
HGNC: | 23625 |
UniProt: | Q8N2Y8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.23e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.23e-11 | 42 |
defensive cell | 4.71e-10 | 48 |
phagocyte | 4.71e-10 | 48 |
monopoietic cell | 7.80e-08 | 59 |
monocyte | 7.80e-08 | 59 |
monoblast | 7.80e-08 | 59 |
promonocyte | 7.80e-08 | 59 |
macrophage dendritic cell progenitor | 1.51e-07 | 61 |
myeloid lineage restricted progenitor cell | 6.60e-07 | 66 |
granulocyte monocyte progenitor cell | 8.63e-07 | 67 |
Ontology term | p-value | n |
---|---|---|
regional part of cerebral cortex | 5.71e-17 | 22 |
cerebral cortex | 6.28e-15 | 25 |
pallium | 6.28e-15 | 25 |
neocortex | 9.21e-14 | 20 |
regional part of telencephalon | 1.32e-11 | 32 |
cerebral hemisphere | 1.32e-11 | 32 |
brain grey matter | 6.73e-11 | 34 |
gray matter | 6.73e-11 | 34 |
telencephalon | 6.73e-11 | 34 |
postcentral gyrus | 2.08e-09 | 1 |
regional part of forebrain | 5.91e-09 | 41 |
forebrain | 5.91e-09 | 41 |
anterior neural tube | 5.91e-09 | 41 |
future forebrain | 5.91e-09 | 41 |
occipital lobe | 1.04e-07 | 5 |
central nervous system | 7.76e-07 | 81 |
regional part of nervous system | 8.57e-07 | 53 |
regional part of brain | 8.57e-07 | 53 |