FFCP PHASE1:Hg19::chr2:97534260..97534307,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54910 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10731 | |||
|TSSclassifier=strong | |||
|UniProt=C9JV89 | |||
|association_with_transcript=17bp_to_ENST00000442264_5end | |||
|cluster_id=chr2:97534260..97534307,- | |||
|description=CAGE_peak_2_at_SEMA4C_5end | |||
|id=chr2:97534260..97534307,- | |||
|ontology_enrichment_celltype=CL:0000055!2.37e-21!180;CL:0000220!2.00e-19!246;CL:0002321!2.04e-19!248;CL:0000222!2.44e-18!119;CL:0000183!4.58e-13!59;CL:0000393!7.88e-13!60;CL:0000211!7.88e-13!60;CL:0000680!1.07e-12!57;CL:0000056!1.07e-12!57;CL:0000355!1.07e-12!57;CL:0000187!4.77e-12!54;CL:0000192!4.16e-10!42;CL:0000514!4.16e-10!42;CL:0000144!8.60e-09!625;CL:0000548!2.88e-08!679;CL:0000004!2.88e-08!679;CL:0000255!2.88e-08!679;CL:0000359!5.29e-08!32;CL:0000012!6.16e-08!682;CL:0002371!8.53e-08!591;CL:0000115!1.19e-07!35;CL:0000213!3.24e-07!57;CL:0000215!3.24e-07!57;CL:0000057!7.43e-07!75 | |||
|ontology_enrichment_celltype_v019=CL:0000192;5.18e-08;43!CL:0000359;8.43e-08;32!CL:0000187;9.39e-08;55!CL:0000393;1.31e-07;61!CL:0000211;1.31e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,9.44e-21,121;CL:0002321,2.44e-19,250;CL:0000393,1.26e-14,61;CL:0000211,1.26e-14,61;CL:0000680,1.77e-14,58;CL:0000056,1.77e-14,58;CL:0000355,1.77e-14,58;CL:0000187,9.53e-14,55;CL:0000192,2.73e-11,43;CL:0000514,2.73e-11,43;CL:0000359,1.32e-08,32;CL:0000213,2.54e-08,58;CL:0000215,2.54e-08,58;CL:0000115,4.95e-08,36 | |||
|ontology_enrichment_development_v019=CL:0000355;2.04e-08;58!CL:0000514;5.18e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!1.27e-20!118;UBERON:0004872!1.19e-18!84;UBERON:0002049!1.81e-17!79;UBERON:0007798!1.81e-17!79;UBERON:0000490!4.08e-17!138;UBERON:0005256!1.74e-16!143;UBERON:0000055!4.13e-16!69;UBERON:0001009!5.26e-16!113;UBERON:0004535!1.13e-15!110;UBERON:0001981!7.69e-15!60;UBERON:0007500!7.69e-15!60;UBERON:0004537!7.69e-15!60;UBERON:0006965!7.69e-15!60;UBERON:0002100!1.09e-14!216;UBERON:0004290!1.66e-13!70;UBERON:0000914!1.33e-12!83;UBERON:0002329!1.33e-12!83;UBERON:0003077!1.33e-12!83;UBERON:0003059!1.33e-12!83;UBERON:0007282!1.33e-12!83;UBERON:0009618!1.33e-12!83;UBERON:0007285!1.33e-12!83;UBERON:0000119!7.33e-12!312;UBERON:0001134!1.12e-11!61;UBERON:0002036!1.12e-11!61;UBERON:0003082!1.12e-11!61;UBERON:0000483!2.24e-11!309;UBERON:0000486!2.31e-11!82;UBERON:0002385!4.83e-11!63;UBERON:0001015!4.83e-11!63;UBERON:0000383!4.83e-11!63;UBERON:0001637!9.41e-11!42;UBERON:0003509!9.41e-11!42;UBERON:0004572!9.41e-11!42;UBERON:0004573!1.53e-09!33;UBERON:0004571!1.53e-09!33;UBERON:0003104!1.71e-09!238;UBERON:0009142!1.71e-09!238;UBERON:0000475!3.29e-08!365;UBERON:0004111!3.97e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;4.66e-09;42!UBERON:0003509;4.66e-09;42!UBERON:0004572;4.66e-09;42!UBERON:0004573;1.27e-08;33!UBERON:0004571;1.27e-08;33!UBERON:0000055;1.42e-08;65!UBERON:0007500;3.06e-08;56!UBERON:0001981;3.06e-08;56!UBERON:0004537;3.06e-08;56!UBERON:0003914;7.48e-08;74!UBERON:0002049;4.34e-07;75!UBERON:0007798;4.34e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000490,1.79e-20,148;UBERON:0003914,6.59e-20,117;UBERON:0004872,1.05e-19,83;UBERON:0002049,1.20e-18,78;UBERON:0007798,1.20e-18,78;UBERON:0000055,8.61e-18,68;UBERON:0007503,4.62e-17,78;UBERON:0007500,2.77e-16,59;UBERON:0001981,2.77e-16,59;UBERON:0004537,2.77e-16,59;UBERON:0006965,2.77e-16,59;UBERON:0001009,4.24e-16,112;UBERON:0004535,6.10e-16,109;UBERON:0002329,1.19e-15,71;UBERON:0003059,1.19e-15,71;UBERON:0007282,1.19e-15,71;UBERON:0004290,1.19e-15,71;UBERON:0009618,1.19e-15,71;UBERON:0005256,1.30e-15,122;UBERON:0003104,1.80e-15,160;UBERON:0009142,1.80e-15,160;UBERON:0007524,2.78e-15,73;UBERON:0003077,4.49e-15,72;UBERON:0007285,4.49e-15,72;UBERON:0001134,1.40e-13,62;UBERON:0002036,1.40e-13,62;UBERON:0003082,1.40e-13,62;UBERON:0000486,2.05e-13,83;UBERON:0002385,1.79e-12,64;UBERON:0001015,1.79e-12,64;UBERON:0000383,1.79e-12,64;UBERON:0002100,3.47e-12,199;UBERON:0000119,8.44e-12,309;UBERON:0001637,1.20e-11,42;UBERON:0003509,1.20e-11,42;UBERON:0004572,1.20e-11,42;UBERON:0000483,2.76e-11,306;UBERON:0004573,5.55e-10,33;UBERON:0004571,5.55e-10,33 | |||
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| |||
|short_description=p2@SEMA4C | |||
}} |
Latest revision as of 01:59, 19 September 2015
Short description: | p2@SEMA4C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SEMA4C_5end |
Coexpression cluster: | NA |
Association with transcript: | 17bp_to_ENST00000442264_5end |
EntrezGene: | SEMA4C |
HGNC: | 10731 |
UniProt: | C9JV89 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 9.44e-21 | 121 |
embryonic cell | 2.44e-19 | 250 |
electrically responsive cell | 1.26e-14 | 61 |
electrically active cell | 1.26e-14 | 61 |
muscle precursor cell | 1.77e-14 | 58 |
myoblast | 1.77e-14 | 58 |
multi-potent skeletal muscle stem cell | 1.77e-14 | 58 |
muscle cell | 9.53e-14 | 55 |
smooth muscle cell | 2.73e-11 | 43 |
smooth muscle myoblast | 2.73e-11 | 43 |
vascular associated smooth muscle cell | 1.32e-08 | 32 |
lining cell | 2.54e-08 | 58 |
barrier cell | 2.54e-08 | 58 |
endothelial cell | 4.95e-08 | 36 |